prot_Ecto-sp13_S_contig8951.20482.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8951.20482.1
Unique Nameprot_Ecto-sp13_S_contig8951.20482.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length420
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8951.20482.1 vs. uniprot
Match: D7FJZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ1_ECTSI)

HSP 1 Score: 522 bits (1345), Expect = 1.210e-178
Identity = 337/420 (80.24%), Postives = 340/420 (80.95%), Query Frame = 0 
Query:    1 SEADAWAKAAEVAAXXXXXXXXXXXXXYVPDGRTVSFSTNWGRRRRTLHDEASAISGGGPISKRPSQEHSGRFGRWGTEAREQWSCCLCGDDXXXXXXXXXXXXXXXGDGGRRGRIRGRVGVAGGCEAVPPRLGPGGMTAADDVRLVWGSGXXXXXXVCGSSGSADAGRIRREAWGTAQGGDDAKELWRPMLATSVSGGXXXX-WSLIRXXXXPQTANARLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXYGGKHNDNNRRGRPRSSERPGSAPPAGTTPGRDHNNKQHAVKNTSSSLTALRGARARAGWQRKGPTPVSRGGTTRFGNNYAFRNSXXXXXXXXXYCSRDATAGGIADRSMFSLNAGGSVYSVYSKGGGREAAPVVAAGGA 419
            SEADAWAKAAEVAAXXXXXXXXXXXXXYVPDG TVSFSTN GRRRRTLHDE SAISGGGP SKRPSQEH GRFGRWGTEAREQWSCCLCGDD   XXXXXXXXXX   DGGRRGRIRGRVGVAGGCEAVPPRLGPGGMTAADDVRLVWGSG XXXXX CGSSGSA AGRIRREAWGTAQGGDD +ELWRPMLATSVSGG     WSLIR    PQTANARL G                             XXXXXXXXXXXXXX            V YGGKHN NNRRGRPRS  RPGSAPPAGTT GR+HNNKQHAVKN SSSLTALR ARARAGWQRKG TPVSRGG TRFGN+YAFRNS  XXXXX  YCSRDATAGGIADRSMFSLNAGGSVYSVYSKGGGREAAPVVA GGA
Sbjct:  243 SEADAWAKAAEVAAXXXXXXXXXXXXXYVPDGLTVSFSTNEGRRRRTLHDEESAISGGGPTSKRPSQEHPGRFGRWGTEAREQWSCCLCGDDSGGXXXXXXXXXXEDVDGGRRGRIRGRVGVAGGCEAVPPRLGPGGMTAADDVRLVWGSGGXXXXXXCGSSGSAGAGRIRREAWGTAQGGDDGRELWRPMLATSVSGGGGGAAWSLIRQHRRPQTANARLMGRKAAAGPTTAAEASRGGISNASQARNKARXXXXXXXXXXXXXXVRRECHRKCD--VVYGGKHNGNNRRGRPRSCARPGSAPPAGTTTGRNHNNKQHAVKNISSSLTALRSARARAGWQRKGSTPVSRGGITRFGNSYAFRNSSSXXXXXHYYCSRDATAGGIADRSMFSLNAGGSVYSVYSKGGGREAAPVVATGGA 660
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BLAST of mRNA_Ecto-sp13_S_contig8951.20482.1 vs. uniprot
Match: A0A6H5K8Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z7_9PHAE)

HSP 1 Score: 473 bits (1216), Expect = 2.560e-159
Identity = 291/421 (69.12%), Postives = 299/421 (71.02%), Query Frame = 0 
Query:    1 SEADAWAKAAEVAAXXXXXXXXXXXXXYVPDGRTVSFSTNWGRRRRTLHDEASAISGGGPISKRPSQEHSGRFGRWGTEAREQWSCCLCGDDXXXXXXXXXXXXXXXGDGGRRGRIRGRVGVAGGCEAVPPRLGPGGMTAADDVRLVWGSGXXXXXXVCGSSGSADAGRIRREAWGTAQGGDDAKELWRPMLATSVSGGXXXX-WSLIRXXXXPQTANARLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VXYGGKHNDNNRRGRPRSSERPGSAPPAGTTPGRDHNNKQHAVKNTSSSLTALRGARARAGWQRKGPTPVSRGGTTRFGNNYAFRNSXXXXXXXXXYCSRDATAGGIADRSMFSLNAGGSVYSVYSKGGGREAAPVVAAGG 418
            SEADAWAKAAEVAA             YVPDG TVSFSTN GRRRRTLHDE SAI+GGG  SKRPSQEH GRFGRWGTEARE+WSCCLCGD XXXXXXXXXXXX      GRRG +RGRVGV GGCEAVPPRLGPGGMTAADDVRLVWG G  XXXX          G  RREAWG A+GGDD +ELWRPMLATSVSGG     WSLIR    PQTANARL G    XXXXXXX                                              V YGGKHND NR GRPRSS RPGSAPPAGTTPGR+HNNKQHAVKNTSSSLTALR ARARAGWQRKGPTPVSRGG TRFG+NYAFRNS         +CSR ATA GIADRSMFSLNAGGSVYSVYSKGGGREAAPVVAAGG
Sbjct:  233 SEADAWAKAAEVAAAALSDEDEEPLPPYVPDGLTVSFSTNGGRRRRTLHDEESAITGGGQTSKRPSQEHPGRFGRWGTEARERWSCCLCGDXXXXXXXXXXXXX------GRRGIVRGRVGVVGGCEAVPPRLGPGGMTAADDVRLVWGRGGDXXXXXXXXXXXXXXGGTRREAWGAARGGDDGRELWRPMLATSVSGGSGGAAWSLIRQHRRPQTANARLMGRKAAXXXXXXXTTATEASRGGIKYAPQARNKAQRAGGVACGGGAAASVGRECHRKRDVVYGGKHNDTNRGGRPRSSARPGSAPPAGTTPGRNHNNKQHAVKNTSSSLTALRSARARAGWQRKGPTPVSRGGITRFGDNYAFRNSSSSSGNNHYHCSRGATARGIADRSMFSLNAGGSVYSVYSKGGGREAAPVVAAGG 647
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8951.20482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJZ1_ECTSI1.210e-17880.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8Z7_9PHAE2.560e-15969.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8951contigEcto-sp13_S_contig8951:1..1260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8951.20482.1mRNA_Ecto-sp13_S_contig8951.20482.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8951 1..1260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8951.20482.1 ID=prot_Ecto-sp13_S_contig8951.20482.1|Name=mRNA_Ecto-sp13_S_contig8951.20482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=420bp
SEADAWAKAAEVAAAALSDEDEEPPPPYVPDGRTVSFSTNWGRRRRTLHD
EASAISGGGPISKRPSQEHSGRFGRWGTEAREQWSCCLCGDDSGGGGGGS
GGGGDEDGDGGRRGRIRGRVGVAGGCEAVPPRLGPGGMTAADDVRLVWGS
GGGGGGGVCGSSGSADAGRIRREAWGTAQGGDDAKELWRPMLATSVSGGG
GAAWSLIRHHRRPQTANARLAGRKAAAAAPTTVPEASRGGIISNAPQATN
KARRAGGVACGGGAAAAVRRECHRKRDVVYGGKHNDNNRRGRPRSSERPG
SAPPAGTTPGRDHNNKQHAVKNTSSSLTALRGARARAGWQRKGPTPVSRG
GTTRFGNNYAFRNSSSSSGNNHYYCSRDATAGGIADRSMFSLNAGGSVYS
VYSKGGGREAAPVVAAGGA*
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