prot_Ecto-sp13_S_contig8940.20464.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8940.20464.1
Unique Nameprot_Ecto-sp13_S_contig8940.20464.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length533
Homology
BLAST of mRNA_Ecto-sp13_S_contig8940.20464.1 vs. uniprot
Match: A0A6H5KIR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR6_9PHAE)

HSP 1 Score: 815 bits (2106), Expect = 5.440e-277
Identity = 462/532 (86.84%), Postives = 474/532 (89.10%), Query Frame = 0
Query:    1 MSAEVSGILPPRLVLPGVVSKIFRFCESVEGSSSEDPDTEHQGDDSVESLGTLASRALFTACHAATSHGASVGPWLAPLLSAIVRVALLTVTSDADDDVAHVQKAAMNCLAVLLQSSAQATAATSAKLDLASEAFEWEIARSVVPETDMVSSAAVPSGIFSPVEIGDVPEFVGSVAVGGVLPERFRGGDEGSWLDISLKEACRREGGQENGEEMEAEGGSXXXXXXXXXGRVPALPAQLRMCFANSAVTVARRCPPEFLPALCSRGNLLGTLLTGASRGSGLLRAACLQALFALVYRTKNVFEGGAISGSGSRGGVICTCDDVMQVACDALGKDQHPEVRVSGLKLLLGVVAAGASPSAAAAKTSPVPSRDPQEQPPTLISDAGACGNDRGITEIDGGGGPGRGVDDGVGGDGRVRGDGGDGRVGAGVNETVSGGIPSGTESVISLSGSRERGTAGIREAKTLMMPDRRSDKST-TLATGAGVGASTGGSVLSPAVMSRAKRLLIGLANIDESAEVRKLASQALAALGGSAT 531
            MSAEVSGILPPRLVLPGVVS+IFRFCESVEGSSSEDP  EHQGDDSVES GTLASRALFTACHAATSHGASVG WLAPLLSAI+RVALL VTSDA DDVAHVQKAAMNCLAVLLQSSAQATA TSA LDLAS+AFEWEIA SVVPETDMVSSAA+PSGIF P+ I DVPEFVGSVA+ GVLPERF GGDEGSWLD SLKEA RREG Q+NGEEM AEG  XXXXX    GRVPA PAQLRMCFANS VTVARRCPPEFLPALCSRGNLLGTLLTGASRGSGLLRAACLQALFALVYRTKNVFEGGAISGSGSRGG  CTCDDVMQVACDALGKDQHPEVRVSGLKLLLGVVAAGASPSAAAAK SPVPSRDP EQPP  ISD GA GNDRGITEI GGG            DGRVRGDGGDGRVGAGVNE  S GIPSGTES ++LSGSR+RGTAGIREAK LMMPDR+SDKST TLAT AG GASTG SVLSPAVMSRAKRLLIGL+NIDESAE RKLASQAL ALGGSAT
Sbjct: 1287 MSAEVSGILPPRLVLPGVVSRIFRFCESVEGSSSEDPGAEHQGDDSVESRGTLASRALFTACHAATSHGASVGSWLAPLLSAIIRVALLPVTSDAADDVAHVQKAAMNCLAVLLQSSAQATATTSATLDLASKAFEWEIASSVVPETDMVSSAAIPSGIFPPMGIRDVPEFVGSVAIWGVLPERFSGGDEGSWLDKSLKEAFRREGAQKNGEEMGAEG--XXXXXGTGGGRVPAFPAQLRMCFANSVVTVARRCPPEFLPALCSRGNLLGTLLTGASRGSGLLRAACLQALFALVYRTKNVFEGGAISGSGSRGGASCTCDDVMQVACDALGKDQHPEVRVSGLKLLLGVVAAGASPSAAAAKASPVPSRDPHEQPPNFISDVGASGNDRGITEIRGGGXXXXXXXXXXXXDGRVRGDGGDGRVGAGVNEAASAGIPSGTESAMNLSGSRQRGTAGIREAKALMMPDRQSDKSTGTLATAAGAGASTGRSVLSPAVMSRAKRLLIGLSNIDESAEARKLASQALVALGGSAT 1816          
BLAST of mRNA_Ecto-sp13_S_contig8940.20464.1 vs. uniprot
Match: D7G4H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H8_ECTSI)

HSP 1 Score: 746 bits (1925), Expect = 5.040e-251
Identity = 425/477 (89.10%), Postives = 433/477 (90.78%), Query Frame = 0
Query:   56 RALFTACHAATSHGASVGPWLAPLLSAIVRVALLTVTSDADDDVAHVQKAAMNCLAVLLQSSAQATAATSAKLDLASEAFEWEIARSVVPETDMVSSAAVPSGIFSPVEIGDVPEFVGSVAVGGVLPERFRGGDEGSWLDISLKEACRREGGQENGEEMEAEGGSXXXXXXXXXGRVPALPAQLRMCFANSAVTVARRCPPEFLPALCSRGNLLGTLLTGASRGSGLLRAACLQALFALVYRTKNVFEGGAISGSGSRGGVICTCDDVMQVACDALGKDQHPEVRVSGLKLLLGVVAAGASPSAAAAKTSPVPSRDPQEQPPTLISDAGACGNDRGITEIDGGGGPGRGVDDGVGGDGRVRGDGGDGRVGAGVNETVSGGIPSGTESVISLSGSRERGTAGIREAKTLMMPDRRSDKSTTLATGAGVGASTGGSVLSPAVMSRAKRLLIGLANIDESAEVRKLASQALAALGGSATS 532
            RALFTACHAATSHGASVGPWLAPLLSAIVRVALL VTSDADDDVA VQKAAMNCLAVLLQSSAQATAATSAK+DLAS+AFEWEI  SVVPET M+SS AVP  IFSP+EIGDVPE  GSVAVGGVLPERFRGGDEGSWLD SLKEA RREG QENGE++      XXXXXXXX GRVPALPAQLRMCFANSAVTVARRCPPE LPALCSRGNLLGT LTGASRGSGLLRAACLQALFALVYRTKNVFEGGAISGSGSR  V CTCD VMQVACDALGKDQHPEVRVSGLKLLLGVVAAGASPSAAAAKTSPVPSRDP EQPPT ISDAG  GNDRGITEI GGGGPGRGVDDGVG  GRVRGDGGDG VGAGVN   SGGIPSGTE  ISLSGSRERGTAGIREAKTLMMPDR  DKS TLAT AG GASTGGSVLSPAVMSRAKRLLIGL+NIDESAEVRKLASQALAALGGS+TS
Sbjct: 1249 RALFTACHAATSHGASVGPWLAPLLSAIVRVALLPVTSDADDDVAQVQKAAMNCLAVLLQSSAQATAATSAKIDLASKAFEWEITSSVVPETGMISSDAVPYAIFSPMEIGDVPELAGSVAVGGVLPERFRGGDEGSWLDKSLKEAFRREGRQENGEKVGXXXXXXXXXXXXXGGRVPALPAQLRMCFANSAVTVARRCPPESLPALCSRGNLLGTFLTGASRGSGLLRAACLQALFALVYRTKNVFEGGAISGSGSRVDVSCTCDGVMQVACDALGKDQHPEVRVSGLKLLLGVVAAGASPSAAAAKTSPVPSRDPHEQPPTFISDAGGIGNDRGITEIGGGGGPGRGVDDGVGDVGRVRGDGGDGGVGAGVNRATSGGIPSGTEIAISLSGSRERGTAGIREAKTLMMPDRHCDKSDTLATAAGAGASTGGSVLSPAVMSRAKRLLIGLSNIDESAEVRKLASQALAALGGSSTS 1725          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8940.20464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KIR6_9PHAE5.440e-27786.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4H8_ECTSI5.040e-25189.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 98..527

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8940contigEcto-sp13_S_contig8940:1981..5543 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8940.20464.1mRNA_Ecto-sp13_S_contig8940.20464.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8940 1981..5555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8940.20464.1 ID=prot_Ecto-sp13_S_contig8940.20464.1|Name=mRNA_Ecto-sp13_S_contig8940.20464.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=533bp
MSAEVSGILPPRLVLPGVVSKIFRFCESVEGSSSEDPDTEHQGDDSVESL
GTLASRALFTACHAATSHGASVGPWLAPLLSAIVRVALLTVTSDADDDVA
HVQKAAMNCLAVLLQSSAQATAATSAKLDLASEAFEWEIARSVVPETDMV
SSAAVPSGIFSPVEIGDVPEFVGSVAVGGVLPERFRGGDEGSWLDISLKE
ACRREGGQENGEEMEAEGGSDEGGSGGGGGRVPALPAQLRMCFANSAVTV
ARRCPPEFLPALCSRGNLLGTLLTGASRGSGLLRAACLQALFALVYRTKN
VFEGGAISGSGSRGGVICTCDDVMQVACDALGKDQHPEVRVSGLKLLLGV
VAAGASPSAAAAKTSPVPSRDPQEQPPTLISDAGACGNDRGITEIDGGGG
PGRGVDDGVGGDGRVRGDGGDGRVGAGVNETVSGGIPSGTESVISLSGSR
ERGTAGIREAKTLMMPDRRSDKSTTLATGAGVGASTGGSVLSPAVMSRAK
RLLIGLANIDESAEVRKLASQALAALGGSATS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold