prot_Ecto-sp13_S_contig8936.20462.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8936.20462.1
Unique Nameprot_Ecto-sp13_S_contig8936.20462.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length560
Homology
BLAST of mRNA_Ecto-sp13_S_contig8936.20462.1 vs. uniprot
Match: A0A6H5KWQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ4_9PHAE)

HSP 1 Score: 841 bits (2173), Expect = 1.950e-276
Identity = 525/599 (87.65%), Postives = 538/599 (89.82%), Query Frame = 0
Query:    1 ALEEELIHEREISLKNARPCAAAAEVAATVAGSRAAEGGEVDPQAAVLASKMKELHLAAMEQLENDMSRNEKNASRALRERLQAARAAREATLQDKESLSASEAAKKARTELEDGEERAIEELMEDLRNDRVEALGRANLEAEAAGTDSLRKEADRLLAEHRNRMAQLQEAMKVDAQRQKTNLQKRLAARRKGTDAVVAAAQPVSLQAAAKAATLADSAEEAERINLERSLLDEANRLQSDAEGYERSVRSILTSAEQAAALGVYGASPRAAEAEMAQEERKESLRAIHERAIAATEAQNENKRRAAAARLGQRRAAARAARAEAMRAAGKSEEEIAKDLAEVDAHDSAEAAQEDATLQAEGVAEIEEERSTQIAAVADGIDPKREAARIRERHIRDATALEKELKQHCKDQRAALANRLRKRKAAKEESLCRAGAGEEETAAALQTLEFEAE---------------------------------------RDVVQLEQALSALKDTEATSLKQAAALASGEDEHPQSGLAELRARHQQSENFLKDSLRAEAGARRARMRQRIAARTAERVKELTAQRRSKDEINVEVAAIRDAGEAE 560
            ALEEEL+HEREI LK+ R CAAAAEVAATVA SRAAEGGEVDP+AAVLASKMKELHLAA+ QLENDMSRNEKNASRALRERLQAARAAREATLQDKESLSASEAAKKARTELEDGEERAIEELMEDLRNDRVEA+GRANLEAEAAGTDSLR+EADRLLAEHRNRMAQLQEAMKVDAQRQ+TNLQKRLAARRKGTDAVVAAAQPVSLQAAAKAATLADSAEEAERINLERSLLDEANRLQSDAEGYERSV++ILTSAEQAAA GVYGAS  AAEAEMAQEERKESLRAIHERAI A EAQNENKRR AAARLGQRRAAARAARAEAMRAAGKSEEEIAKDLAEVDAHDS EAAQEDA LQAEGVAEIEEE STQIAAVADGIDPK+EAARIRERHIRDA ALEKELKQHC+DQR ALA+RLRKRKAAKEE L RAGAGEEETAAALQTLEFEAE                                       RD VQLEQALSALKDTEATS KQAAALASGEDEHPQSGLAELRARHQ+SENFLKDSLRAEAGARRARMRQRIAARTAERVKELTAQRR KDEIN EVAAIRDAGEAE
Sbjct: 1251 ALEEELLHEREIGLKDVRACAAAAEVAATVASSRAAEGGEVDPRAAVLASKMKELHLAAIGQLENDMSRNEKNASRALRERLQAARAAREATLQDKESLSASEAAKKARTELEDGEERAIEELMEDLRNDRVEAIGRANLEAEAAGTDSLREEADRLLAEHRNRMAQLQEAMKVDAQRQQTNLQKRLAARRKGTDAVVAAAQPVSLQAAAKAATLADSAEEAERINLERSLLDEANRLQSDAEGYERSVQNILTSAEQAAASGVYGASLGAAEAEMAQEERKESLRAIHERAIVAMEAQNENKRRTAAARLGQRRAAARAARAEAMRAAGKSEEEIAKDLAEVDAHDSEEAAQEDAMLQAEGVAEIEEELSTQIAAVADGIDPKKEAARIRERHIRDAAALEKELKQHCRDQRGALASRLRKRKAAKEEFLRRAGAGEEETAAALQTLEFEAESTYENFGQCVVFTTMAPISDCPRTSFTSPVSSNLSPLVQRDFVQLEQALSALKDTEATSQKQAAALASGEDEHPQSGLAELRARHQESENFLKDSLRAEAGARRARMRQRIAARTAERVKELTAQRRGKDEINAEVAAIRDAGEAE 1849          
BLAST of mRNA_Ecto-sp13_S_contig8936.20462.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI)

HSP 1 Score: 827 bits (2135), Expect = 4.340e-268
Identity = 507/560 (90.54%), Postives = 522/560 (93.21%), Query Frame = 0
Query:    1 ALEEELIHEREISLKNARPCAAAAEVAATVAGSRAAEGGEVDPQAAVLASKMKELHLAAMEQLENDMSRNEKNASRALRERLQAARAAREATLQDKESLSASEAAKKARTELEDGEERAIEELMEDLRNDRVEALGRANLEAEAAGTDSLRKEADRLLAEHRNRMAQLQEAMKVDAQRQKTNLQKRLAARRKGTDAVVAAAQPVSLQAAAKAATLADSAEEAERINLERSLLDEANRLQSDAEGYERSVRSILTSAEQAAALGVYGASPRAAEAEMAQEERKESLRAIHERAIAATEAQNENKRRAAAARLGQRRAAARAARAEAMRAAGKSEEEIAKDLAEVDAHDSAEAAQEDATLQAEGVAEIEEERSTQIAAVADGIDPKREAARIRERHIRDATALEKELKQHCKDQRAALANRLRKRKAAKEESLCRAGAGEEETAAALQTLEFEAERDVVQLEQALSALKDTEATSLKQAAALASGEDEHPQSGLAELRARHQQSENFLKDSLRAEAGARRARMRQRIAARTAERVKELTAQRRSKDEINVEVAAIRDAGEAE 560
            ALEEEL+HEREI LK+AR CAAAAEVAATVA SRAAEGGEVDP+AAVLASKMKELHL AMEQLENDMSRNEKNASRALRERLQAARAAREATLQDKESLSASEAA+KARTELEDGEERAIEELMEDLRNDRVEA+GRANLEAEAAGTDSLR EADRLLAEHRNRMAQLQEAMKVDAQRQKTNLQKRLAARRKGTDAVVAAAQPVSLQAAAKAATLADSAEEAERINLERSLLDEANRLQSDAEGYERSV++ILTSAE AAA GVYGASPRAAEAEM  EER +SLRAIHERA+AA E QNENKRRA AARLGQRRAAARAARAEAMRAAGKSEEEIAKDLAEV+AHDS EAAQEDA LQAEGVA IEEERSTQIAAV DGI PK+EAARIRERHIRDA ALEKELKQHC+DQRAALA+RLRKR                ETAAALQTLEFEAERDVVQLEQALS LKDTEATS KQAAALASGEDEHPQSGLAELRARHQ+SENFLKDSLRAEAGARRARMRQRIAARTAERVKELTAQRRSKDEI+ EVAAIRDAGEAE
Sbjct: 4814 ALEEELLHEREIGLKDARACAAAAEVAATVASSRAAEGGEVDPRAAVLASKMKELHLTAMEQLENDMSRNEKNASRALRERLQAARAAREATLQDKESLSASEAARKARTELEDGEERAIEELMEDLRNDRVEAIGRANLEAEAAGTDSLRAEADRLLAEHRNRMAQLQEAMKVDAQRQKTNLQKRLAARRKGTDAVVAAAQPVSLQAAAKAATLADSAEEAERINLERSLLDEANRLQSDAEGYERSVQNILTSAEHAAASGVYGASPRAAEAEMVHEERNQSLRAIHERAMAAMETQNENKRRAVAARLGQRRAAARAARAEAMRAAGKSEEEIAKDLAEVNAHDSQEAAQEDAILQAEGVAAIEEERSTQIAAVTDGIAPKKEAARIRERHIRDAAALEKELKQHCRDQRAALASRLRKRXXXXXXXXXXXXXXXXETAAALQTLEFEAERDVVQLEQALSGLKDTEATSQKQAAALASGEDEHPQSGLAELRARHQESENFLKDSLRAEAGARRARMRQRIAARTAERVKELTAQRRSKDEIHAEVAAIRDAGEAE 5373          
BLAST of mRNA_Ecto-sp13_S_contig8936.20462.1 vs. uniprot
Match: A0A6H5KDL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL2_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 4.850e-9
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 ALEEELIHEREISLKNARPCAAAAEVAATVAGSRAAEGGEVDPQAAVLASKM 52
            ALEEEL+HER I LK+ R CAAAAEVAATVA SRA EGGEVD +AAVLASK+
Sbjct:  444 ALEEELLHERVIGLKDVRACAAAAEVAATVASSRATEGGEVDLRAAVLASKI 495          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8936.20462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KWQ4_9PHAE1.950e-27687.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR26_ECTSI4.340e-26890.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDL2_9PHAE4.850e-978.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 151..186
NoneNo IPR availableCOILSCoilCoilcoord: 53..80
NoneNo IPR availableCOILSCoilCoilcoord: 449..469
NoneNo IPR availableCOILSCoilCoilcoord: 228..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8936contigEcto-sp13_S_contig8936:425..6432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8936.20462.1mRNA_Ecto-sp13_S_contig8936.20462.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8936 425..6432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8936.20462.1 ID=prot_Ecto-sp13_S_contig8936.20462.1|Name=mRNA_Ecto-sp13_S_contig8936.20462.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=560bp
ALEEELIHEREISLKNARPCAAAAEVAATVAGSRAAEGGEVDPQAAVLAS
KMKELHLAAMEQLENDMSRNEKNASRALRERLQAARAAREATLQDKESLS
ASEAAKKARTELEDGEERAIEELMEDLRNDRVEALGRANLEAEAAGTDSL
RKEADRLLAEHRNRMAQLQEAMKVDAQRQKTNLQKRLAARRKGTDAVVAA
AQPVSLQAAAKAATLADSAEEAERINLERSLLDEANRLQSDAEGYERSVR
SILTSAEQAAALGVYGASPRAAEAEMAQEERKESLRAIHERAIAATEAQN
ENKRRAAAARLGQRRAAARAARAEAMRAAGKSEEEIAKDLAEVDAHDSAE
AAQEDATLQAEGVAEIEEERSTQIAAVADGIDPKREAARIRERHIRDATA
LEKELKQHCKDQRAALANRLRKRKAAKEESLCRAGAGEEETAAALQTLEF
EAERDVVQLEQALSALKDTEATSLKQAAALASGEDEHPQSGLAELRARHQ
QSENFLKDSLRAEAGARRARMRQRIAARTAERVKELTAQRRSKDEINVEV
AAIRDAGEAE
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