prot_Ecto-sp13_S_contig8911.20441.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8911.20441.1
Unique Nameprot_Ecto-sp13_S_contig8911.20441.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length282
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8911.20441.1 vs. uniprot
Match: D8LIU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU6_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 9.900e-118
Identity = 170/179 (94.97%), Postives = 172/179 (96.09%), Query Frame = 0 
Query:    1 GLVLAWTHAISNGNGNIAVVVEPDGLALEGGACPADNEHGDNEAGGWPRFFTAMAHLCVFSSQQDFHDFLATRDLNQPPDGRHLGMDEDEGGDPSHAWDQDLDIRKALEGTATDQVQAMARVLHYLLSHVQPRLQGKVQAVLHEPDVAFFSDKPGKYVGIFVRKTEGRTYKSLKMTETL 179
            GLVLAWTHAISNGNG+IAVVVEPDGLA EGGACPADNEHGD EAGGWPRFFT MAHLCVFSSQQDFHDFLATRDLNQPPDGRHLGMDEDEGGDP HAW QD DIRKALEGTATDQ QAMARVLHYLLSHVQPRLQGKVQAVLHEPDVAFFSDKPGKYVG+FVRKTEGRTYKSLKMTETL
Sbjct:  113 GLVLAWTHAISNGNGDIAVVVEPDGLAPEGGACPADNEHGDEEAGGWPRFFTPMAHLCVFSSQQDFHDFLATRDLNQPPDGRHLGMDEDEGGDPPHAWGQDPDIRKALEGTATDQAQAMARVLHYLLSHVQPRLQGKVQAVLHEPDVAFFSDKPGKYVGMFVRKTEGRTYKSLKMTETL 291
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BLAST of mRNA_Ecto-sp13_S_contig8911.20441.1 vs. uniprot
Match: A0A6H5L1D7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D7_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 4.540e-110
Identity = 162/178 (91.01%), Postives = 165/178 (92.70%), Query Frame = 0 
Query:    2 LVLAWTHAISNGNGNIAVVVEPDGLALEGGACPADNEHGDNEAGGWPRFFTAMAHLCVFSSQQDFHDFLATRDLNQPPDGRHLGMDEDEGGDPSHAWDQDLDIRKALEGTATDQVQAMARVLHYLLSHVQPRLQGKVQAVLHEPDVAFFSDKPGKYVGIFVRKTEGRTYKSLKMTETL 179
            LVLAWTHAISNGNG+IAVVVEP  LA EGGACP D EHGD EAGGWPRFFT MAHLCVFSSQQDF  FLATRDLN+PPDGRHLGMDEDEGGD  HAWDQD DIRKALEGTA DQVQAMARVLHYLLSHVQPRLQGKVQAVLHEPDVAFFSDKPGKYVG+FVRKTEGRTYKSLKMTETL
Sbjct:   77 LVLAWTHAISNGNGDIAVVVEPHRLAPEGGACPTDKEHGDEEAGGWPRFFTPMAHLCVFSSQQDFRSFLATRDLNKPPDGRHLGMDEDEGGDLPHAWDQDPDIRKALEGTAMDQVQAMARVLHYLLSHVQPRLQGKVQAVLHEPDVAFFSDKPGKYVGMFVRKTEGRTYKSLKMTETL 254
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8911.20441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIU6_ECTSI9.900e-11894.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1D7_9PHAE4.540e-11091.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8911contigEcto-sp13_S_contig8911:4701..6270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8911.20441.1mRNA_Ecto-sp13_S_contig8911.20441.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8911 4699..6270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8911.20441.1 ID=prot_Ecto-sp13_S_contig8911.20441.1|Name=mRNA_Ecto-sp13_S_contig8911.20441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=282bp
GLVLAWTHAISNGNGNIAVVVEPDGLALEGGACPADNEHGDNEAGGWPRF
FTAMAHLCVFSSQQDFHDFLATRDLNQPPDGRHLGMDEDEGGDPSHAWDQ
DLDIRKALEGTATDQVQAMARVLHYLLSHVQPRLQGKVQAVLHEPDVAFF
SDKPGKYVGIFVRKTEGRTYKSLKMTETLVRVWYFVVGCLAWFLRPPGGM
GHGGAKRWWVPHRIDCTHLTQGGRQFQTHIVMWFPSDLAWFAAPPTKGLI
APLSDHRPAEDCFEPTTSSSVNYEYVSMMYLV
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