prot_Ecto-sp13_S_contig8909.20434.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8909.20434.1
Unique Nameprot_Ecto-sp13_S_contig8909.20434.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8909.20434.1 vs. uniprot
Match: D7FLU8_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLU8_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 9.870e-6
Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 0 
Query:    1 YAGTGKTFTLRAVAQRNPALRILYAAVSAPLRTLESVVWRC-TDTTGASPVS 51
            YAGTGKTFTLRAVAQRNP L+ILYAA +  +    S ++   TD    S VS
Sbjct:  170 YAGTGKTFTLRAVAQRNPTLKILYAAFNRSVAAAASSIFSSNTDCKTMSSVS 221
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8909.20434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLU8_ECTSI9.870e-657.69DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8909contigEcto-sp13_S_contig8909:5631..5945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8909.20434.1mRNA_Ecto-sp13_S_contig8909.20434.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8909 5631..5945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8909.20434.1 ID=prot_Ecto-sp13_S_contig8909.20434.1|Name=mRNA_Ecto-sp13_S_contig8909.20434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
YAGTGKTFTLRAVAQRNPALRILYAAVSAPLRTLESVVWRCTDTTGASPV
SHVRVFRIQRYFYSTLSHALNRSRLPLLALCGLVHCQQQQEAFCCSASTS
APKV*
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