prot_Ecto-sp13_S_contig890.20421.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig890.20421.1 vs. uniprot
Match: D8LPG4_ECTSI (EsV-1-138 n=2 Tax=root TaxID=1 RepID=D8LPG4_ECTSI) HSP 1 Score: 510 bits (1314), Expect = 5.900e-180 Identity = 258/289 (89.27%), Postives = 274/289 (94.81%), Query Frame = 0
Query: 1 MNLVAWNSAIQIRKRFSTENVGTSGTLWYQVASPESHKELVGNEKAIRQIDDWFSEALAKPKTSACLFLHGESGTGKSTAVTMIAQKYQFETVTTYADRSRTPARLEGVVREAGVHGPRGVVVLDDFEIFLEETTSLRVLSKLLRQLLSTEAEDSSNRDLSRCLFIIISNSKHKHFGSLQDISTTVHFERLHQSEVNKVFNRLAWRVRRHSYVPPMACYLSSISSSGTITQGVQQLQLLYAGNTLPDFLRRPCRKKKKLAGHTNSHRDCISYLWSDIYTDKILEHLVDN 289
MNLVAWNSAIQIRKR +TENV T+G LWYQVASP SH+ELVGN KAIRQI+DWFSEA A+P+TSACLFLHGESGTGKSTAVTMIAQK++F+TVTTYADRSRTPARLEGVVREAGVHGPRGVVVLDDFEIFLEETTSLRVLSKLLRQLLST D+S R+ SRCLFIIISNSKHK FGSLQDISTT+HFERLHQSE+NKVFNRLAWRVRRHSYVPPMA YLSSISSSGTITQGVQQLQLLYAG+T PDFLRRP RKK+K+AGHTNSHRDCISYLWSDIYTDKILEHLVDN
Sbjct: 1 MNLVAWNSAIQIRKRVATENVCTAGALWYQVASPTSHQELVGNGKAIRQIEDWFSEASAEPETSACLFLHGESGTGKSTAVTMIAQKHEFKTVTTYADRSRTPARLEGVVREAGVHGPRGVVVLDDFEIFLEETTSLRVLSKLLRQLLSTG--DTSVRNRSRCLFIIISNSKHKQFGSLQDISTTIHFERLHQSEINKVFNRLAWRVRRHSYVPPMASYLSSISSSGTITQGVQQLQLLYAGDTPPDFLRRPGRKKQKIAGHTNSHRDCISYLWSDIYTDKILEHLVDN 287
BLAST of mRNA_Ecto-sp13_S_contig890.20421.1 vs. uniprot
Match: A0A836CHP7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP7_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 7.370e-12 Identity = 45/148 (30.41%), Postives = 79/148 (53.38%), Query Frame = 0
Query: 3 LVAWNSAIQIRKRFSTENVGTSGTLWYQVASPESHKELVGNEKAIRQIDDWFSEALAKPKTSACLFLHGESGTGKSTAVTMIAQKYQFETVTTYADRSRTPARLEGVVREAGVHGPRGVVVLDDFEIFLEETTSLRVLSKLLRQLLST 150
LV W +AI + + T + +W++ +PE+ +L+GN+ +I+ I+ WF + L + G GTGK+TAV ++A + + T +D RT +L G++ AG + V+ LD+ + F E T L ++K+ R LS+
Sbjct: 10 LVNWGNAIVVERH--TPKNEEAQKMWFETCAPEASSQLIGNKDSIKAINAWFKGGAVQK----VLVVVGAPGTGKTTAVRLLAHENGVDIHITGSDVPRTQTQLAGIINNAGA--VQQVLFLDEADSFTNEPTGLACIAKMARDRLSS 149
BLAST of mRNA_Ecto-sp13_S_contig890.20421.1 vs. uniprot
Match: A0A089ZUW4_METFO (Replication factor C large subunit n=4 Tax=Methanobacterium TaxID=2160 RepID=A0A089ZUW4_METFO) HSP 1 Score: 55.1 bits (131), Expect = 6.730e-5 Identity = 33/128 (25.78%), Postives = 70/128 (54.69%), Query Frame = 0
Query: 27 LWYQVASPESHKELVGNEKAIRQIDDWFSEALAKPKTSACLFLHGESGTGKSTAVTMIAQKYQFETVTTYADRSRTPARLEGVVREAGV------HGPRGVVVLDDFEIFL--EETTSLRVLSKLLRQ 146
LW + SP++ K+++GN+KAI +I++W E+ + C+ L G GTGK+T ++A+++ +D+ R+ + + EA G R +++LD+ + E+ +R ++K++++
Sbjct: 2 LWTEKYSPQTMKDVLGNKKAIEEIENWV-ESWDHGEAQKCILLVGPPGTGKTTLAHLVAREFSDHIELNASDK-RSYDIIMNTIGEASASVSLFGQGGRKLIILDEVDGLHGNEDRGGIRAINKIIKE 127
BLAST of mRNA_Ecto-sp13_S_contig890.20421.1 vs. uniprot
Match: K2RPG7_METFP (Replication factor C large subunit n=2 Tax=Methanobacterium TaxID=2160 RepID=K2RPG7_METFP) HSP 1 Score: 54.7 bits (130), Expect = 8.820e-5 Identity = 34/128 (26.56%), Postives = 69/128 (53.91%), Query Frame = 0
Query: 27 LWYQVASPESHKELVGNEKAIRQIDDWFSEALAKPKTSACLFLHGESGTGKSTAVTMIAQKYQFETVTTYADRSRTPARLEGVVREAGV------HGPRGVVVLDDFEIFL--EETTSLRVLSKLLRQ 146
LW + SP++ K+++GN+KAI +I++W E + CL L G GTGK+T ++A+++ +D+ R+ + + EA G R +++LD+ + E+ +R ++K++++
Sbjct: 2 LWTEKYSPQTMKDVLGNKKAIEEIENWL-ENWDHGEPQKCLLLVGPPGTGKTTLAHLVAREFSDHIELNASDK-RSYDIIMNTIGEASASVSLFGQGGRKLIILDEVDGLHGNEDRGGIRAINKIIKE 127
BLAST of mRNA_Ecto-sp13_S_contig890.20421.1 vs. uniprot
Match: U6EDT8_9EURY (Replication factor C large subunit n=1 Tax=Methanobacterium sp. MB1 TaxID=1379702 RepID=U6EDT8_9EURY) HSP 1 Score: 54.7 bits (130), Expect = 8.930e-5 Identity = 34/128 (26.56%), Postives = 69/128 (53.91%), Query Frame = 0
Query: 27 LWYQVASPESHKELVGNEKAIRQIDDWFSEALAKPKTSACLFLHGESGTGKSTAVTMIAQKYQFETVTTYADRSRTPARLEGVVREAGV------HGPRGVVVLDDFEIFL--EETTSLRVLSKLLRQ 146
LW + SP++ KE++GN+KAI +I++W E+ + CL L G GTGK+T ++A+++ +D+ R+ + + EA G +++LD+ + E+ +R ++K++++
Sbjct: 2 LWTEKYSPKNMKEVLGNKKAIEEIENWV-ESWDHGEAQKCLLLVGPPGTGKTTLAHLVAREFSDHIELNASDK-RSYDIIMNTIGEASASVSLFGQGGHKLIILDEVDGLHGNEDRGGIRAINKIIKE 127 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig890.20421.1 ID=prot_Ecto-sp13_S_contig890.20421.1|Name=mRNA_Ecto-sp13_S_contig890.20421.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bpback to top |