prot_Ecto-sp13_S_contig890.20420.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig890.20420.1
Unique Nameprot_Ecto-sp13_S_contig890.20420.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length144
Homology
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BLAST of mRNA_Ecto-sp13_S_contig890.20420.1 vs. uniprot
Match: Q8QNE2_ESV1K (EsV-1-137 n=2 Tax=root TaxID=1 RepID=Q8QNE2_ESV1K)

HSP 1 Score: 276 bits (705), Expect = 1.070e-93
Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0 
Query:    1 MASSLEKQVHVEEHIPERCAEQWNYQFPVVNQQHCLMSIVDCEDPQKPAAIKVFGCYPSVDAANAAAAKISSECDFFHVYVCPTNAWVPVPPSPDFIEKVQYQESRMKEIQETFAALKDRKAQDVIRHLHKESGVSDAQNGLE 143
            MASSLEKQVHVEEHIPERCAEQW+YQF VVNQQHCLMSIVDCEDPQKPAAIKVFGCYPSVDAANAAAAKISSECDFFHVYVCPTNAWVPVPPSPDFIE VQYQESRMKEIQETFAALKDRKAQDVIRHL+KES V DAQNGL+
Sbjct:    1 MASSLEKQVHVEEHIPERCAEQWDYQFSVVNQQHCLMSIVDCEDPQKPAAIKVFGCYPSVDAANAAAAKISSECDFFHVYVCPTNAWVPVPPSPDFIENVQYQESRMKEIQETFAALKDRKAQDVIRHLNKESEVPDAQNGLK 143
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BLAST of mRNA_Ecto-sp13_S_contig890.20420.1 vs. uniprot
Match: B5LWJ0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWJ0_9PHYC)

HSP 1 Score: 120 bits (301), Expect = 3.320e-32
Identity = 60/124 (48.39%), Postives = 86/124 (69.35%), Query Frame = 0 
Query:    6 EKQVHVEEHIPERCAEQWNYQFPVVNQQHCLMSIVDCEDPQKPAAIKVFGCYPSVDAANAAAAKISSECDFFHVYVCPTNAWVPVPPSPDFIEKVQYQESRMKEIQETFAALKDRKAQDVIRHL 129
            E   HVE+ I ER  + W+YQ+ V +Q + ++ I  CE+   P+A+K+FG Y +++ AN AA KIS+E DFF VYV  TNAWVP+PPS +F+E+V+YQE RM EI++TF  +K R A  + R +
Sbjct:    4 ESYTHVEQDIQERSDDAWSYQYTVPHQNYVVLFI--CENSPGPSAVKIFGAYRTLEDANRAADKISNEMDFFDVYVADTNAWVPIPPSQEFVEEVEYQEKRMSEIKDTFIKMKQRDAAQMRRRI 125
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QNE2_ESV1K1.070e-9395.10EsV-1-137 n=2 Tax=root TaxID=1 RepID=Q8QNE2_ESV1K[more]
B5LWJ0_9PHYC3.320e-3248.39Uncharacterized protein n=1 Tax=Feldmannia species... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig890contigEcto-sp13_S_contig890:19441..19872 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig890.20420.1mRNA_Ecto-sp13_S_contig890.20420.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig890 19441..19872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig890.20420.1 ID=prot_Ecto-sp13_S_contig890.20420.1|Name=mRNA_Ecto-sp13_S_contig890.20420.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=144bp
MASSLEKQVHVEEHIPERCAEQWNYQFPVVNQQHCLMSIVDCEDPQKPAA
IKVFGCYPSVDAANAAAAKISSECDFFHVYVCPTNAWVPVPPSPDFIEKV
QYQESRMKEIQETFAALKDRKAQDVIRHLHKESGVSDAQNGLE*
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