prot_Ecto-sp13_S_contig890.20418.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig890.20418.1
Unique Nameprot_Ecto-sp13_S_contig890.20418.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length550
Homology
BLAST of mRNA_Ecto-sp13_S_contig890.20418.1 vs. uniprot
Match: Q8QNE4_ESV1K (EsV-1-135 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNE4_ESV1K)

HSP 1 Score: 617 bits (1590), Expect = 2.630e-215
Identity = 397/478 (83.05%), Postives = 407/478 (85.15%), Query Frame = 0
Query:    1 MSSALVDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFKQSMSKMSEWNSSVVHDFCGKLVKKFPAISGCEALAAEMISLTSKIMDEAHDSDGRYVAVDFAFHDVLHSFIVECSKVFIEHPEWFSHGTDSTEYQTCLSNARIAMKNRDVVYNATRKYVMLTNVPASPSTSXXXXXXXXXXXXXXXXXXAHPSLISKSFAGAEPESASGIYLTTGNESASCAGGGDESGDEEVADHLEITKNINVVTGDVETVAVPSQTFQETMCNHLSSGHIMYPGSMNSSAVYPNVPSAFNTD--IPVPMPPLNALGPYPPGGGLFPSLSVPTNTSDGCR------RDDS----DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGHGGMDEDFGTXXXXXXXXXXXXXXETESSGSDSLQSGDLIDFESSDQSGGSSSSEHESWQTASYCEDETETDESASSTDGES 466
            MSSALVDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFKQSMSKMSEWNSSVVHDFCGKLVKKFPAIS CEALA EMI LTSKIMDEAHDSDGRYV VDFAFHDVLHSFIVECSKVFIEHPEWFSHG+DSTEYQTCL+NARIAMKNRDVVYNATRKYVMLTNVPASPSTS XXXXXXXXXXXXXXXX A  SLI +SFAGAEP SASGIYLTT NES SCAGGGDESG+EEVADHLEITKNINVVTGDVETVAVPSQTFQETM NHLSSGHIMYPGSMNSS+VYPNVP AFN D  +PVPMPPLNALGPYPP  GLFPSLSVPT TS+         RDDS    D               XXXXXXXXXXXXXXXXXXXXX   +GG   DFGT  XXXXXXXXXXXX          QSGD +DFESSDQSG SS SE ESWQ+ASYCEDETET ESASSTDGES
Sbjct:    1 MSSALVDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFKQSMSKMSEWNSSVVHDFCGKLVKKFPAISRCEALATEMIRLTSKIMDEAHDSDGRYVPVDFAFHDVLHSFIVECSKVFIEHPEWFSHGSDSTEYQTCLNNARIAMKNRDVVYNATRKYVMLTNVPASPSTSSXXXXXXXXXXXXXXXX-ARRSLIPESFAGAEPVSASGIYLTTENESESCAGGGDESGNEEVADHLEITKNINVVTGDVETVAVPSQTFQETMSNHLSSGHIMYPGSMNSSSVYPNVPPAFNVDMPVPVPMPPLNALGPYPPSEGLFPSLSVPTKTSEDSSGGQSSVRDDSGDSGDSDGYDDSEDEDMLEEXXXXXXXXXXXXXXXXXXXXXXXQNGG---DFGTDDXXXXXXXXXXXXXXXXXXXXXSQSGDSVDFESSDQSGDSSPSESESWQSASYCEDETETGESASSTDGES 474          
BLAST of mRNA_Ecto-sp13_S_contig890.20418.1 vs. uniprot
Match: D8LPG1_ECTSI (EsV-1-135 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPG1_ECTSI)

HSP 1 Score: 545 bits (1403), Expect = 8.660e-187
Identity = 363/479 (75.78%), Postives = 377/479 (78.71%), Query Frame = 0
Query:    1 MSSALVDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFKQSMSKMSEWNSSVVHDFCGKLVKKFPAISGCEALAAEMISLTSKIMDEAHDSDGRYVAVDFAFHDVLHSFIVECSKVFIEHPEWFSHGTDSTEYQTCLSNARIAMKNRDVVYNATRKYVMLTNVPASPSTSXXXXXXXXXXXXXXXXXXAHPSLISKS---------FAGAEPESASGIYLTTGNESASCAGGGDESGDEEVADHLEITKNINVVTGDVETVAVPSQTFQETMCNHLSSGHIMYPGSMNSSAVYPNVPSAFNTDIPVPMP----PLNALGPYPPGGGLFPSLSVPTNTSDGCRRDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGHGGMDEDFGTXXXXXXXXXXXXXXETESSGSDSLQSGDLIDFESSDQSGGSSSSEHESWQTASYCEDETETDESASSTDGES 466
            MSSALVDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFKQSM+KMSEWNSSVVHDFCGKLVKKFPAI+ CEALA EMI LTSKIMDEAHDSDGRYV VDFAFHDVLHSFIVECSKVFIEHPEWFSHGTDSTEYQTCL+NARIAMKNRDVVYNATRKYVMLTN PAS    XXXXXXXXXXX         PS  S S         FA A+P SASGIYLTT N+S SCAGGGD SG+EEVADHLEITKNINVVTGDVETVA PSQTFQE M NHLSSGHIMYPGSMNSS+VYP+VPSAFN D+P+PMP    PL ALGPYPPG  LFPSLSVP  TS+        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        +D GT              ETESSGSDSLQSGD +DFESS                     D+TET ESASSTDGES
Sbjct:    1 MSSALVDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFKQSMAKMSEWNSSVVHDFCGKLVKKFPAINRCEALATEMIRLTSKIMDEAHDSDGRYVPVDFAFHDVLHSFIVECSKVFIEHPEWFSHGTDSTEYQTCLNNARIAMKNRDVVYNATRKYVMLTNAPASXXXXXXXXXXXXXXXPS-------PSYSSSSXXXXXXXXXFASADPASASGIYLTTENDSQSCAGGGDGSGNEEVADHLEITKNINVVTGDVETVAAPSQTFQENMSNHLSSGHIMYPGSMNSSSVYPHVPSAFNVDMPMPMPVAMPPLTALGPYPPGESLFPSLSVPPKTSEDGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVRGDDLGTDEDSDTEY------ETESSGSDSLQSGDSVDFESSSGDXXXXXXXXXXXXXX-XXXDDTETGESASSTDGES 465          
BLAST of mRNA_Ecto-sp13_S_contig890.20418.1 vs. uniprot
Match: B5LWI8_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWI8_9PHYC)

HSP 1 Score: 120 bits (301), Expect = 4.610e-27
Identity = 62/158 (39.24%), Postives = 97/158 (61.39%), Query Frame = 0
Query:    6 VDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFKQSMSKMSEWNSSVVHDFCGKLVKKFPAISGCEALA--AEMISLTSKIMDEAHDSDGRYVAVDFAFHDVLHSFIVECSKVFIEHPEWFSHGTDSTEYQTCLSNARIAMKNRDVV 161
            +++KA+C  ++ ++L  P+FTIF+IQHDQ+A R ++ N LLYHFK+SM+ + +WNS  V DFC  LV +FP +   E +   AE+  +T KI++ + +    +          LH  I ECS VFI+HP WF+    S EY+ C ++A   ++ R V+
Sbjct:    6 LESKAICTLRLENLLLEPIFTIFRIQHDQVATRTETPNSLLYHFKKSMASVEQWNSITVRDFCNSLVTRFPQLDN-EFVTNFAELQQITCKILNRSSELC-TFTPSAINRDAFLHCIISECSNVFIDHPVWFAVEESSPEYRECKNHALNMIRERSVL 161          
BLAST of mRNA_Ecto-sp13_S_contig890.20418.1 vs. uniprot
Match: Q6XM66_9PHYC (FirrV-1-A21 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM66_9PHYC)

HSP 1 Score: 72.8 bits (177), Expect = 1.280e-11
Identity = 41/134 (30.60%), Postives = 72/134 (53.73%), Query Frame = 0
Query:    2 SSALVDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFKQSMSKMSEWNSSVVHDFCGKLVKKFPAIS-GCEALAAEMISLTSKIMDEAHDSDGRYVAVDFAFHDVLHSFIVECSKVFIEHPEW 134
            SSAL++AK L   ++ ++L  P++ +F +Q+ QIA R ++ N L+YH + SMS + +WN+  + DF   LV +FP +          +  LT  I++ +  S     +V    +  LH+ +   S   ++H EW
Sbjct:    3 SSALIEAKTLSALKLYELLIDPLYDVFCMQYRQIANRTETTNSLVYHIRNSMSGIRQWNALTIRDFFNNLVVQFPQLDLEFTKQFVHLQELTCNILNSSSASLVHTPSVSDR-NSFLHATLSGASNALLDHREW 135          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Q8QNE4_ESV1K2.630e-21583.05EsV-1-135 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPG1_ECTSI8.660e-18775.78EsV-1-135 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
B5LWI8_9PHYC4.610e-2739.24Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XM66_9PHYC1.280e-1130.60FirrV-1-A21 n=1 Tax=Feldmannia irregularis virus a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 344..382

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig890contigEcto-sp13_S_contig890:17238..18887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig890.20418.1mRNA_Ecto-sp13_S_contig890.20418.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig890 17238..18887 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig890.20418.1 ID=prot_Ecto-sp13_S_contig890.20418.1|Name=mRNA_Ecto-sp13_S_contig890.20418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=550bp
MSSALVDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFK
QSMSKMSEWNSSVVHDFCGKLVKKFPAISGCEALAAEMISLTSKIMDEAH
DSDGRYVAVDFAFHDVLHSFIVECSKVFIEHPEWFSHGTDSTEYQTCLSN
ARIAMKNRDVVYNATRKYVMLTNVPASPSTSSSSSSSSSFSAAAASSSSA
HPSLISKSFAGAEPESASGIYLTTGNESASCAGGGDESGDEEVADHLEIT
KNINVVTGDVETVAVPSQTFQETMCNHLSSGHIMYPGSMNSSAVYPNVPS
AFNTDIPVPMPPLNALGPYPPGGGLFPSLSVPTNTSDGCRRDDSDDSEDN
DMEEEEEEEEEEEQEEEEEEEEEEEEEEGDDESGHGGMDEDFGTDDDLDT
DEDSDTEYETESSGSDSLQSGDLIDFESSDQSGGSSSSEHESWQTASYCE
DETETDESASSTDGESDTETGETDSETDNTYDEVGSDTMTESSESESESE
CESECESESESESESESESESESESESESESESGSGSTDSEWDSEQSES*
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