prot_Ecto-sp13_S_contig890.20416.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig890.20416.1
Unique Nameprot_Ecto-sp13_S_contig890.20416.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length354
Homology
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BLAST of mRNA_Ecto-sp13_S_contig890.20416.1 vs. uniprot
Match: Q8QNE6_ESV1K (EsV-1-133 n=2 Tax=root TaxID=1 RepID=Q8QNE6_ESV1K)

HSP 1 Score: 618 bits (1593), Expect = 4.390e-222
Identity = 326/353 (92.35%), Postives = 334/353 (94.62%), Query Frame = 0 
Query:    1 MYANPVRPRHFADESLDYRIMTNADSDNAAVRCGKFFLRQVFGSVRKIIIHSRVLRRFLSLKGLPTQQGTLLIFKDMADAIDMIETANGVMISSIDADKMGAHLNAITSRWLQKRGRFVENDPETGLYKKLFRLKFIYNHLDEVYSDKYNIYQAAYVDLAYTVRAVLCFVMQTISFAALMKEGRGSGETSLAGDRRGTVDVVLIVVTIMFMFFNLPANSMTSSMSHNVVLFHVFFNMKMYGRLAFVVMDLVVNFFIISLMPVVSARLLYDTTDSASIVTKSLSVFFVTSLDDSAITKSESNNMSESQNALLRDVTEKVDHFVDSDRLWFVAYLPWVEMLLLLASVTVSYLILL 353
            M  NP R RHFADESLDYRIMT ADSDNA VRCGKFFLRQ+FGSVRKII HSRVLRRFLSLKGLPTQQGTLL+FKDM DAIDMIETANGVMIS+IDADKMGA LNA+TSRWL+KRGRFVENDPE GLYKKLFRLKFIYNHLDEVYSDKYNIYQAAYVD AYTVRAVLCFVMQ ISFAALMKEG GSGETSLAGD R TVDVVLIVVTIMFMFFNLPANS+TSSMSHNVVLFHVFF MKMYGRLAFVVMDLVVNFFIISLMPVVSARLLYDT DSASIVTKSLSVFFVTSLDDSAITKSESNNMS SQ+ALLRDVTEKVDHFVDSDRLWFVAYLPWVEMLLL+ASVTVSY ILL
Sbjct:    1 MRVNPARQRHFADESLDYRIMTTADSDNAVVRCGKFFLRQIFGSVRKIISHSRVLRRFLSLKGLPTQQGTLLLFKDMPDAIDMIETANGVMISNIDADKMGARLNAMTSRWLEKRGRFVENDPEAGLYKKLFRLKFIYNHLDEVYSDKYNIYQAAYVDPAYTVRAVLCFVMQIISFAALMKEGGGSGETSLAGDHRSTVDVVLIVVTIMFMFFNLPANSITSSMSHNVVLFHVFFKMKMYGRLAFVVMDLVVNFFIISLMPVVSARLLYDTNDSASIVTKSLSVFFVTSLDDSAITKSESNNMSASQSALLRDVTEKVDHFVDSDRLWFVAYLPWVEMLLLIASVTVSYSILL 353
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNE6_ESV1K4.390e-22292.35EsV-1-133 n=2 Tax=root TaxID=1 RepID=Q8QNE6_ESV1K[more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 260..326
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 327..352
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 220..238
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 353..353
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 239..259
NoneNo IPR availableTMHMMTMhelixcoord: 330..352
NoneNo IPR availableTMHMMTMhelixcoord: 161..180
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
NoneNo IPR availableTMHMMTMhelixcoord: 243..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig890contigEcto-sp13_S_contig890:15389..16450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig890.20416.1mRNA_Ecto-sp13_S_contig890.20416.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig890 15389..16450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig890.20416.1 ID=prot_Ecto-sp13_S_contig890.20416.1|Name=mRNA_Ecto-sp13_S_contig890.20416.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=354bp
MYANPVRPRHFADESLDYRIMTNADSDNAAVRCGKFFLRQVFGSVRKIII
HSRVLRRFLSLKGLPTQQGTLLIFKDMADAIDMIETANGVMISSIDADKM
GAHLNAITSRWLQKRGRFVENDPETGLYKKLFRLKFIYNHLDEVYSDKYN
IYQAAYVDLAYTVRAVLCFVMQTISFAALMKEGRGSGETSLAGDRRGTVD
VVLIVVTIMFMFFNLPANSMTSSMSHNVVLFHVFFNMKMYGRLAFVVMDL
VVNFFIISLMPVVSARLLYDTTDSASIVTKSLSVFFVTSLDDSAITKSES
NNMSESQNALLRDVTEKVDHFVDSDRLWFVAYLPWVEMLLLLASVTVSYL
ILL*
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