prot_Ecto-sp13_S_contig890.20411.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig890.20411.1
Unique Nameprot_Ecto-sp13_S_contig890.20411.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
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BLAST of mRNA_Ecto-sp13_S_contig890.20411.1 vs. uniprot
Match: Q8QNF2_ESV1K (EsV-1-127 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNF2_ESV1K)

HSP 1 Score: 144 bits (364), Expect = 1.690e-43
Identity = 73/81 (90.12%), Postives = 78/81 (96.30%), Query Frame = 0 
Query:    4 NKKTSLRDIVEDLKTQQTQLVQSFEGDQDTSCQRISDALSDLELYAAKLQTIVRRLDSITESLVQESDARVKPWYVRIFCP 84
            NKK SLR IVEDLKTQQTQLVQSFE DQDTSCQR+SDALSDLELYAAKLQTIVRRLD+ITE+LVQE+DARVKPWY+RIFCP
Sbjct:    8 NKKPSLRHIVEDLKTQQTQLVQSFEEDQDTSCQRVSDALSDLELYAAKLQTIVRRLDNITETLVQENDARVKPWYIRIFCP 88
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BLAST of mRNA_Ecto-sp13_S_contig890.20411.1 vs. uniprot
Match: D8LPF3_ECTSI (EsV-1-127 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPF3_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 2.900e-42
Identity = 71/81 (87.65%), Postives = 78/81 (96.30%), Query Frame = 0 
Query:    4 NKKTSLRDIVEDLKTQQTQLVQSFEGDQDTSCQRISDALSDLELYAAKLQTIVRRLDSITESLVQESDARVKPWYVRIFCP 84
            NK+TSLR IVEDLKTQQTQLV+SFE DQ TSCQR+SDALSDLELYAAKLQT+VRRLD+ITE+LVQESDARVKPWY+RIFCP
Sbjct:    8 NKQTSLRRIVEDLKTQQTQLVRSFEEDQHTSCQRVSDALSDLELYAAKLQTVVRRLDNITETLVQESDARVKPWYIRIFCP 88
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QNF2_ESV1K1.690e-4390.12EsV-1-127 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPF3_ECTSI2.900e-4287.65EsV-1-127 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig890contigEcto-sp13_S_contig890:10311..10565 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig890.20411.1mRNA_Ecto-sp13_S_contig890.20411.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig890 10311..10565 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig890.20411.1 ID=prot_Ecto-sp13_S_contig890.20411.1|Name=mRNA_Ecto-sp13_S_contig890.20411.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MRFNKKTSLRDIVEDLKTQQTQLVQSFEGDQDTSCQRISDALSDLELYAA
KLQTIVRRLDSITESLVQESDARVKPWYVRIFCP*
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