prot_Ecto-sp13_S_contig890.20410.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig890.20410.1
Unique Nameprot_Ecto-sp13_S_contig890.20410.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length202
Homology
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Match: Q8QNF3_ESV1K (EsV-1-126 n=2 Tax=root TaxID=1 RepID=Q8QNF3_ESV1K)

HSP 1 Score: 377 bits (967), Expect = 1.150e-131
Identity = 183/200 (91.50%), Postives = 192/200 (96.00%), Query Frame = 0
Query:    1 MPELFFDVETTGLPPRKATPETFEQYDSCRVVSIAWVLRDKKTVYAQRYSVADPGIADENIGAEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTLLEKHAANKKKKQ 200
            MPELFFDVETTGLPPRKA PETFEQYDSCRVVSIAWVLRD+KTVY+QRYSV DPGIADENIGAEFVHGISRE+MD+YGNA KVVLSDFMADV++SDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSF SLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGH FENAHHAMCDVDAMVKCYFTLLEKH ++K K +
Sbjct:    1 MPELFFDVETTGLPPRKANPETFEQYDSCRVVSIAWVLRDEKTVYSQRYSVTDPGIADENIGAEFVHGISREVMDRYGNATKVVLSDFMADVDRSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFKSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHVFENAHHAMCDVDAMVKCYFTLLEKHTSSKNKNE 200          
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Match: A0A6H5J9I1_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9I1_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 9.750e-121
Identity = 181/196 (92.35%), Postives = 187/196 (95.41%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKATPETFEQYDSCRVVSIAWVLRDKKTVYAQRYSVADPGIADENIGAEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTLLEKHAANKKKK 199
            + F  +TTGLPPRKATPETFEQYDSCRVVSIAWVLRDKKTVYAQRYSVADPGIADENIGAEFVHGISRE+MDKYGNAI VVLSDFMADVN+SDKIVAHNLDFDRSVVSAELFRMGSSDDARRL+SF SLCTMKSTTNLVRIPNS  SYKW KLEELHEFLFG+AFENAHHAMCDVDAMVKCYFTLLEKH ANKKKK
Sbjct:  426 VVFQCQTTGLPPRKATPETFEQYDSCRVVSIAWVLRDKKTVYAQRYSVADPGIADENIGAEFVHGISREVMDKYGNAINVVLSDFMADVNRSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLLSFKSLCTMKSTTNLVRIPNSCESYKWLKLEELHEFLFGNAFENAHHAMCDVDAMVKCYFTLLEKHTANKKKK 621          
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Match: A0A2N6A8F9_9BACT (3'-5' exonuclease n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A2N6A8F9_9BACT)

HSP 1 Score: 127 bits (319), Expect = 1.670e-33
Identity = 79/189 (41.80%), Postives = 109/189 (57.67%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKATPETFEQYDSCRVVSIAWVLRDKK-TVYAQRYSVADPGIADENIGAEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTLLEK 191
            LFFD ETTGLP     P T +  +  R+V IAW L DKK    A+  S+  P        A  VHGI+ E   K G  ++  L  F+  + +S+ +VAHN+ FD  ++ AEL R G +     LM+ N +CTM ++T    IP  YG +KWP L ELHE LF   F +AH+A+ DV+AMV+C+F L ++
Sbjct:    3 LFFDTETTGLPKLYNAPIT-DTDNWPRLVQIAWSLHDKKGKELAKHESIIKPDGFKIPKQASDVHGITTERASKEGIELESALDQFIWALKESEHLVAHNIRFDEKIIGAELVRKGFN---HALMNKNKICTMLASTKYCEIPGRYG-FKWPTLTELHEKLFEEDFPDAHNALVDVEAMVRCFFELKKR 186          
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Match: A0A1F5TNP1_9BACT (DNA polymerase III subunit epsilon n=1 Tax=Candidatus Falkowbacteria bacterium RIFOXYD2_FULL_34_120 TaxID=1798007 RepID=A0A1F5TNP1_9BACT)

HSP 1 Score: 127 bits (318), Expect = 2.420e-33
Identity = 72/191 (37.70%), Postives = 110/191 (57.59%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKATPETFEQYDSCRVVSIAWVL--RDKKTVYAQRYSVADPG-IADENIGAEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTLLEK 191
            LFFD ETTGLP R   P + +  +  R+V +AW++   D K +  +   +   G I   ++    +HGI+ EI +K G  +K  L +F+  + +S+ +VAHN++FD  ++ AELFR   + D         +CTM+ +T   RI +  G YKWPKL ELH+ LFG  F++AH A  DV A  +C+F L ++
Sbjct:    3 LFFDTETTGLPRRWQAPIS-DTNNWPRMVQLAWIVFDNDGKEIMGKNRIIKPEGYIIPADVSR--IHGITTEIAEKEGILLKKALQEFIKGLQRSEIVVAHNINFDEKILGAELFRKQINTD---FFERPQICTMRESTQFCRIRSGRGGYKWPKLTELHQILFGEDFDDAHDAFADVKATARCFFELRKR 187          
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Match: A0A496KD83_9BACT (3'-5' exonuclease n=1 Tax=Alloprevotella sp. TaxID=1872471 RepID=A0A496KD83_9BACT)

HSP 1 Score: 125 bits (313), Expect = 1.650e-32
Identity = 77/189 (40.74%), Postives = 110/189 (58.20%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKATPETFEQYDSCRVVSIAWVLRDKK-TVYAQRYSVADPGIADENIGAEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTLLEK 191
            LFFD ETTG+P     P T    +  R+V + W+L D K  V A+   +  P   +    A  VHGI+ E   + G A+  V+  F AD+N+S  +V HNLD+D  ++ AE  R+G   D+R + +  +LCTM +T +  +IP +YG YKWPKL EL+  LFG  F+ AH AM D+ A   C+F LL++
Sbjct:    8 LFFDTETTGIPQDYKAPCTNTD-NWPRLVQLGWLLTDDKGVVLAEGNRIVRPDGFEIPKEASAVHGITTERALQEGEALLDVIYAFGADLNQSQLVVGHNLDYDLHILGAEYVRLGY--DSRIMFARPTLCTMLATIDFCQIPGAYG-YKWPKLMELYTKLFGQEFDGAHDAMADIRATKDCFFELLKR 192          
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Match: A0A1Y1CQJ6_9BACT (DNA polymerase III subunit epsilon n=6 Tax=Bacteroidia TaxID=200643 RepID=A0A1Y1CQJ6_9BACT)

HSP 1 Score: 123 bits (309), Expect = 6.380e-32
Identity = 76/188 (40.43%), Postives = 105/188 (55.85%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKATPETFEQYDSCRVVSIAWVL---RDKKTVYAQRYSVADPGIADENIGAEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTL 188
            LFFD ETTGLP R   P T +  +  R+V +AW+L   RD +   A R  + +  I      A  +HGIS +     G  +   L++F   +N++D ++AHN+ FD  ++ AE  R    D   RL+    +CTMK+TTN+ +IP   G YKWP L ELH+FLF   FE AH A+ DV A   C+F L
Sbjct:    3 LFFDTETTGLPKRWNAPVT-DLDNWPRLVQLAWLLYDSRDNEIKRANRIIIPEGYIIPPE--ASNIHGISTQKAIDEGIDLTEALNEFSKALNEADFLIAHNISFDEVIIGAEFLRK---DIKSRLIDIPKICTMKTTTNVCKIPGRSG-YKWPNLTELHQFLFQKDFEGAHDALADVKACADCFFEL 183          
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Match: K2FS27_9BACT (Exonuclease domain-containing protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2FS27_9BACT)

HSP 1 Score: 122 bits (306), Expect = 1.700e-31
Identity = 71/186 (38.17%), Postives = 106/186 (56.99%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKATPETFEQYDSCRVVSIAWVLRDKK-TVYAQRYSVADPGIADENIGAEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTL 188
            LFFD ET GLP +       +  +  R++ +A+V+ D    +   R  +  P   + N  A  VHG ++EI++K G +I   L+ F++D+  ++ ++ HN+ FD+S++ AEL R G              CTM+S+TN  RI    G YKWPKL+ELH+ LFG  FE+AH A+ DV A  KC+F L
Sbjct:    3 LFFDTETNGLP-KNWGAHVHDVDNWPRMLQLAYVICDDDGDLRMSRNLLIKPEGFEINEDAAKVHGFTKEILEKKGISIIKALTTFLSDLQDANILIGHNIQFDKSILGAELIRAGMEAGYEDFAKLPRFCTMQSSTNFCRIDGPRG-YKWPKLQELHKHLFGAEFEDAHDALADVSATAKCFFEL 186          
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Match: L1MCU0_9BACT (Exonuclease n=1 Tax=Alloprevotella sp. oral taxon 473 str. F0040 TaxID=1035197 RepID=L1MCU0_9BACT)

HSP 1 Score: 121 bits (304), Expect = 3.780e-31
Identity = 73/189 (38.62%), Postives = 110/189 (58.20%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKATPETFEQYDSCRVVSIAWVLRDKK-TVYAQRYSVADPGIADENIGAEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTLLEK 191
            LFFD ETTG+P     P T +  +  R++ + W+L D +  + ++   +  P   +    A  VHGI+ EI    G ++  V+  F  D+N+SD +V HNLD+D  V+ AE  R+G   D+R + +  +LCTM++T +   IP +YG  KWPKL EL+  LFG  F+ AH AM D+ A  +C+F LL +
Sbjct:    8 LFFDTETTGIPQNYKAPCT-DINNWPRLIQLGWLLTDAEGQILSEGNHIVRPEGFEIPKAASDVHGITTEIALAEGQSLLDVIFAFGTDLNRSDCVVGHNLDYDLHVLGAEYVRLGY--DSRIMFARPTLCTMQATIDYCNIPGAYGP-KWPKLMELYTKLFGKGFDGAHDAMADIVATKECFFELLRR 192          
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Match: A0A6L5DV46_9BACT (3'-5' exonuclease n=1 Tax=Marinifilum sp. N1E240 TaxID=2608082 RepID=A0A6L5DV46_9BACT)

HSP 1 Score: 121 bits (303), Expect = 5.050e-31
Identity = 75/190 (39.47%), Postives = 104/190 (54.74%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKATPETFEQYDSC-RVVSIAWVLRDKKTVYAQRYSVADPGIADENIG----AEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTL 188
            LFFD ETTGLP     P T    D+  R+V +AW+L D K    Q    A+  +  E       A  VHGIS E   K G  +   L++F + + +++ ++AHN+ FD  +  AE  R   S+   +L +   +CTMK+TTN+ +IP  YG YKWP L ELH  LF   F++AH A+ DV A   C+F L
Sbjct:    3 LFFDTETTGLPKNWGAPVT--DIDNWPRLVQLAWLLYDSKN---QEIKSANRIVIPEGFTIPTEASNVHGISTERAHKEGIDLTDALNEFSSALEEANFLIAHNISFDEKIAGAEFIRKNISN---KLNNIPKICTMKTTTNICKIPGRYG-YKWPNLTELHNHLFNKGFDDAHDALADVKACADCFFEL 183          
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Match: A0A2I0DBM9_9FLAO (3'-5' exonuclease n=1 Tax=Psychroflexus sp. MES1-P1E TaxID=2058320 RepID=A0A2I0DBM9_9FLAO)

HSP 1 Score: 119 bits (298), Expect = 2.280e-30
Identity = 74/192 (38.54%), Postives = 105/192 (54.69%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKATPETFEQYDSCRVVSIAWVLRDKKTVYAQRYSVADPGIADENIG----AEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTLLEK 191
            LFFD ETTGLP     P + +  +  R++ I W+L D+      R  + +  I  EN      A  +HGI+ E     G  +  +L  F   + +S+ IVAHN++FD+ ++ AEL R G   +         +CTMKS+TN  +IP +YG YKWP L ELH  LFG  FE AH A  D+DA  KC++ L ++
Sbjct:    3 LFFDTETTGLPKNWKAPVS-DLNNWPRMIQIGWILSDE----GHRIDIGNFIIKPENFTIPNEASKIHGITTEKAMSEGVDLNTLLQKFNGLIERSNCIVAHNINFDKMILGAELLRKGVISNFEYT---TKICTMKSSTNYCQIPGNYG-YKWPTLSELHIKLFGKDFEGAHDAFADIDATEKCFWELKKR 185          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNF3_ESV1K1.150e-13191.50EsV-1-126 n=2 Tax=root TaxID=1 RepID=Q8QNF3_ESV1K[more]
A0A6H5J9I1_9PHAE9.750e-12192.35Glutaredoxin domain-containing protein n=1 Tax=Ect... [more]
A0A2N6A8F9_9BACT1.670e-3341.803'-5' exonuclease n=1 Tax=Candidatus Parcubacteria... [more]
A0A1F5TNP1_9BACT2.420e-3337.70DNA polymerase III subunit epsilon n=1 Tax=Candida... [more]
A0A496KD83_9BACT1.650e-3240.743'-5' exonuclease n=1 Tax=Alloprevotella sp. TaxID... [more]
A0A1Y1CQJ6_9BACT6.380e-3240.43DNA polymerase III subunit epsilon n=6 Tax=Bactero... [more]
K2FS27_9BACT1.700e-3138.17Exonuclease domain-containing protein n=1 Tax=uncu... [more]
L1MCU0_9BACT3.780e-3138.62Exonuclease n=1 Tax=Alloprevotella sp. oral taxon ... [more]
A0A6L5DV46_9BACT5.050e-3139.473'-5' exonuclease n=1 Tax=Marinifilum sp. N1E240 T... [more]
A0A2I0DBM9_9FLAO2.280e-3038.543'-5' exonuclease n=1 Tax=Psychroflexus sp. MES1-P... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 2..194
e-value: 3.9E-4
score: 19.8
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 5..184
e-value: 4.0E-6
score: 27.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 3..199
e-value: 1.1E-28
score: 102.4
NoneNo IPR availablePANTHERPTHR30231DNA POLYMERASE III SUBUNIT EPSILONcoord: 5..187
NoneNo IPR availablePANTHERPTHR30231:SF24coord: 5..187
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig890contigEcto-sp13_S_contig890:9653..10258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig890.20410.1mRNA_Ecto-sp13_S_contig890.20410.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig890 9653..10258 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig890.20410.1 ID=prot_Ecto-sp13_S_contig890.20410.1|Name=mRNA_Ecto-sp13_S_contig890.20410.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
MPELFFDVETTGLPPRKATPETFEQYDSCRVVSIAWVLRDKKTVYAQRYS
VADPGIADENIGAEFVHGISREIMDKYGNAIKVVLSDFMADVNKSDKIVA
HNLDFDRSVVSAELFRMGSSDDARRLMSFNSLCTMKSTTNLVRIPNSYGS
YKWPKLEELHEFLFGHAFENAHHAMCDVDAMVKCYFTLLEKHAANKKKKQ
I*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf