prot_Ecto-sp13_S_contig890.20407.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig890.20407.1
Unique Nameprot_Ecto-sp13_S_contig890.20407.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length395
Homology
BLAST of mRNA_Ecto-sp13_S_contig890.20407.1 vs. uniprot
Match: A0A6H5J7D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7D8_9PHAE)

HSP 1 Score: 686 bits (1770), Expect = 5.340e-247
Identity = 352/390 (90.26%), Postives = 360/390 (92.31%), Query Frame = 0
Query:    1 YGNFCNFYRSLITHVGANEDRDYYAAWLEQQ-LKLAKGSARSRRRSIDLFTSGRPARDETFIVERLRESVDTRLSDHHILAYTDDIMAAIESNTSIVEVSAYSQTSSCRCRLFNCLSKRSVSITSLDLTGGACIDSTQTIADSCVHDLKRLSLSTGCSDEEMDGLTIDLVCDAVAEAGVLEVLGVGNVVGDYEEWADGLIRALETCPITSLRIDDTIFDIPCVPGMVRVLPELQATDVKLTQCDFDGWGKPVFDALFSNENIQWLDVSSTKIGDGSVGALVDMVTRGTLTRLAIGNCGMGREGIRRVLEATTHAGSNLVFISIFDNDIDVPSIFEGLGKTSLTGMHVGELRNCDTAIANFVADTQCDIDTSDADECYNGGGGVFPWRTKS 389
            YGNFCNFYRSLITHVGANEDRDYYAAWLEQQ LKLAKGSARSRRRSIDL+TSGRPARDETFIVERL ESVDTRLSDHHIL YTDDIM AIESNTSIVEVSAYSQTSSCRCRLFNC SKRSVSITSLDLTG ACIDSTQTIADSCVHDLKRLSLSTGCSD+EMDGLTI LVCDAVAEAG                 ADGLIRALETCPI+SLRID TIFDIPCVPGMVRVLPELQATDVKLTQCDFD WGKPVFDALFSNENI+WL VSSTKIGDGSVGALVDMVTRGTLTRLAIGN GMGR GIRRVLEATTHAGSN+VFISIFDNDIDVPSIFEGLGKTSLTGMHVGEL NC+TAIANFVADTQCDIDTSDAD+CYNGGGGVFPWRT+S
Sbjct:   23 YGNFCNFYRSLITHVGANEDRDYYAAWLEQQQLKLAKGSARSRRRSIDLYTSGRPARDETFIVERLLESVDTRLSDHHILVYTDDIMDAIESNTSIVEVSAYSQTSSCRCRLFNCFSKRSVSITSLDLTGRACIDSTQTIADSCVHDLKRLSLSTGCSDQEMDGLTIALVCDAVAEAG-----------------ADGLIRALETCPISSLRIDGTIFDIPCVPGMVRVLPELQATDVKLTQCDFDNWGKPVFDALFSNENIRWLGVSSTKIGDGSVGALVDMVTRGTLTRLAIGNYGMGRGGIRRVLEATTHAGSNVVFISIFDNDIDVPSIFEGLGKTSLTGMHVGELSNCNTAIANFVADTQCDIDTSDADDCYNGGGGVFPWRTES 395          
BLAST of mRNA_Ecto-sp13_S_contig890.20407.1 vs. uniprot
Match: D8LPE8_ECTSI (EsV-1-118 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPE8_ECTSI)

HSP 1 Score: 682 bits (1761), Expect = 2.180e-245
Identity = 333/393 (84.73%), Postives = 360/393 (91.60%), Query Frame = 0
Query:    1 YGNFCNFYRSLITHVGANEDRDYYAAWLEQQLKLAKGSARSRRRSIDLFTSGRPARDETFIVERLRESVDTRLSDHHILAYTDDIMAAIESNTSIVEVSAYSQTSSCRCRLFNCLSKRSVSITSLDLTGGACIDSTQTIADSCVHDLKRLSLSTGCSDEEMDGLTIDLVCDAVAEAGVLEVLGVGNVVGDYEEWADGLIRALETCPITSLRIDDTIFDIPCVPGMVRVLPELQATDVKLTQCDFDGWGKPVFDALFSNENIQWLDVSSTKIGDGSVGALVDMVTRGTLTRLAIGNCGMGREGIRRVLEATTHAGSNLVFISIFDNDIDVPSIFEGLGKTSLTGMHVGELRNCDTAIANFVADTQCDIDTSDADECYNGGGGVFPWRTKSHAWF 393
            Y  FC FY+SLITHVGANEDRDYYAAWLE +LKLAKGSARSRRRSIDLF  G P R+  FIVERLRESVDTRLSDHHI+AYTDDI+ AIESNTSIVEVSA+SQ S CRCRLFNCLS RS +ITSLDLTGG C++STQ IADSC   LKRLSLSTGCSD+E+DG T+DLVC+AVA+AG+LEVL VGNVVGDYEEWADGLIRAL+ CPITSLRIDDTIF+IPCVPGMVRVLP+LQATDVKLTQCDFDGWGKPVFDALFSNENI+WLDVSSTKIGDGSVGALV MVTRGTLTRLA+GNC +GRE IRRVLEATTHAGSNL F+SIFDNDID+PSIFEGLGKTSLTGMHVGELRNCD A+A FVADT+C IDTS++D CY GGGGVFPWRTKSH WF
Sbjct:   56 YDTFCTFYQSLITHVGANEDRDYYAAWLEHRLKLAKGSARSRRRSIDLFMGGLPLREVAFIVERLRESVDTRLSDHHIVAYTDDIVKAIESNTSIVEVSAFSQISPCRCRLFNCLSARSTAITSLDLTGGICVESTQIIADSCAQSLKRLSLSTGCSDQEVDGFTVDLVCEAVADAGMLEVLQVGNVVGDYEEWADGLIRALDACPITSLRIDDTIFEIPCVPGMVRVLPKLQATDVKLTQCDFDGWGKPVFDALFSNENIRWLDVSSTKIGDGSVGALVAMVTRGTLTRLAVGNCDIGRESIRRVLEATTHAGSNLEFVSIFDNDIDLPSIFEGLGKTSLTGMHVGELRNCDQAVAKFVADTRCHIDTSNSDVCYGGGGGVFPWRTKSHEWF 448          
BLAST of mRNA_Ecto-sp13_S_contig890.20407.1 vs. uniprot
Match: D8LPE6_ECTSI (EsV-1-118 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPE6_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 2.080e-94
Identity = 165/347 (47.55%), Postives = 223/347 (64.27%), Query Frame = 0
Query:    2 GNFCNFYRSLITHVGANEDRDYYAAWLEQQLKLAKGSARSRRRSIDLFTSGRPARDETFIVERLRESVDTRLSDHHILAYTDDIMAAIESNTSIVE-VSAYSQTSSCRCRLFNCLSKRSVSITSLDLTGGACIDSTQTIADSCVHDLKRLSLSTGCSDEEMDGLTIDLVCDAVAEAGVLEVLGVGNVVGDYEEWADGLIRALETCPITSLRIDDTIFDIPCVPGMVRVLPELQATDVKLTQCD-FDGWGKPVFDALFSNENIQWLDVSSTKIGDGSVGALVDMVTRGTLTRLAIGNCGMGREGIRRVLEATTHAGSNLVFISIFDNDIDVPSIFEGLGKTSLTGMHV 346
            G F +F   +I H G NE++DYY +W   +L       RS R  I L        +E  I++RLR+SVD +L DH    YT  I+ A+ESNTSIVE V+  +  S CRC LF CLS+RS  I SL++ G +C D+ Q IAD CV  LK+L++++     +MDG  +D VC+AV+E G+LE L +   + DY+   DGL+R L+TCP+ SL ++ +IF       MVRVL  ++ATDVK T+ + F  W +P FDALFSN +IQ LD+S T IGDGS+GAL +MV RGTL +LAI  C +GR+G + VL+AT H  SNL FISI  +D D P +F+GL  TSL  +H+
Sbjct:   54 GFFDSFTDDMIVHTGCNEEKDYYLSWCSHRLFGETSPYRSPRHIISLEFPSLHTVEEALIIQRLRDSVDRQLRDHDFFPYTPRILDAVESNTSIVEIVTNNNDLSPCRCDLFECLSRRSTDIESLEIVGESCADANQAIADGCVQGLKKLTIASN-PGSDMDGDKVDTVCEAVSEVGILESLEIDGAIADYDGGGDGLVRVLDTCPLRSLSVNASIFGEDAWSEMVRVLSNMKATDVKFTELEIFRDWMRPAFDALFSNTSIQSLDLSFTNIGDGSIGALENMVKRGTLIKLAIRGCSIGRDGNQSVLQATAHVDSNLRFISI--SDTDHPDLFKGLVNTSLKVVHL 397          
BLAST of mRNA_Ecto-sp13_S_contig890.20407.1 vs. uniprot
Match: Q8QNG1_ESV1K (EsV-1-118 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNG1_ESV1K)

HSP 1 Score: 286 bits (733), Expect = 6.640e-89
Identity = 162/346 (46.82%), Postives = 214/346 (61.85%), Query Frame = 0
Query:    2 GNFCNFYRSLITHVGANEDRDYYAAWLEQQLKLAKGSARSRRRSIDLFTSGRPARDETFIVERLRESVDTRLSDHHILAYTDDIMAAIESNTSIVEVSAYSQTSSCRCRLFNCLSKRSVSITSLDLTGGACIDSTQTIADSCVHDLKRLSLSTGCSDEEMDGLTIDLVCDAVAEAGVLEVLGVGNVVGDYEEWADGLIRALETCPITSLRIDDTIFDIPCVPGMVRVLPELQATDVKLTQCDF-DGWGKPVFDALFSNENIQWLDVSSTKIGDGSVGALVDMVTRGTLTRLAIGNCGMGREGIRRVLEATTHAGSNLVFISIFDNDIDVPSIFEGLGKTSLTGMHV 346
            G F +F  S+I H G NE++DYY AW   +L        S R  I L        +E  I++RLR+SVD +L DH    YT  I+ A+ESNTSIVE+ A++    CRC LF CLS+RS  I SL   G +C D+ Q IAD CV  LK+L++++     +MDG  +D VC+AV+E G+LE L +   + DY+   DGL+  L+TCP+ SL ++ +IF       MVRVL  ++ TDVK T+      W +P FDALFSN +IQ LD+S T IGDGS+GAL +MV RGTL +L I  C +GR+G + VL ATT   SNL FISI  +D D P IF GL  TSL  +H+
Sbjct:  124 GFFDSFIDSMIVHTGCNEEKDYYLAWFSYRLFGKTDCYWSPRHIISLEFPTLHTVEEALIIQRLRDSVDRQLRDHDFFPYTPRILDAVESNTSIVEIVAHNNDMPCRCDLFECLSRRSTDIESLMFWGESCADAYQAIADGCVQGLKKLTIASN-PGSDMDGDKVDTVCEAVSEVGILESLELDGAIADYDGGGDGLVGVLDTCPLRSLSVNASIFGEDAWSEMVRVLSNMKVTDVKFTELGIVRDWMRPAFDALFSNTSIQSLDLSFTNIGDGSIGALENMVKRGTLIKLGIRECSIGRDGNKSVLRATTRVDSNLRFISI--SDTDHPDIFAGLVNTSLEVVHL 466          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J7D8_9PHAE5.340e-24790.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPE8_ECTSI2.180e-24584.73EsV-1-118 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LPE6_ECTSI2.080e-9447.55EsV-1-118 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNG1_ESV1K6.640e-8946.82EsV-1-118 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 65..368
e-value: 3.9E-14
score: 53.6
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 93..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig890contigEcto-sp13_S_contig890:6974..8158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig890.20407.1mRNA_Ecto-sp13_S_contig890.20407.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig890 6974..8158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig890.20407.1 ID=prot_Ecto-sp13_S_contig890.20407.1|Name=mRNA_Ecto-sp13_S_contig890.20407.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=395bp
YGNFCNFYRSLITHVGANEDRDYYAAWLEQQLKLAKGSARSRRRSIDLFT
SGRPARDETFIVERLRESVDTRLSDHHILAYTDDIMAAIESNTSIVEVSA
YSQTSSCRCRLFNCLSKRSVSITSLDLTGGACIDSTQTIADSCVHDLKRL
SLSTGCSDEEMDGLTIDLVCDAVAEAGVLEVLGVGNVVGDYEEWADGLIR
ALETCPITSLRIDDTIFDIPCVPGMVRVLPELQATDVKLTQCDFDGWGKP
VFDALFSNENIQWLDVSSTKIGDGSVGALVDMVTRGTLTRLAIGNCGMGR
EGIRRVLEATTHAGSNLVFISIFDNDIDVPSIFEGLGKTSLTGMHVGELR
NCDTAIANFVADTQCDIDTSDADECYNGGGGVFPWRTKSHAWFT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf