prot_Ecto-sp13_S_contig890.20404.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig890.20404.1
Unique Nameprot_Ecto-sp13_S_contig890.20404.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length351
Homology
BLAST of mRNA_Ecto-sp13_S_contig890.20404.1 vs. uniprot
Match: Q8QNG1_ESV1K (EsV-1-118 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNG1_ESV1K)

HSP 1 Score: 656 bits (1692), Expect = 9.200e-235
Identity = 324/343 (94.46%), Postives = 329/343 (95.92%), Query Frame = 0
Query:    1 MAAFSTLNHFGVNFGNEDVMSRVSFFLNQRDKIAMSTSSRRVHQVLKHFLPTASEYVTTVKPNLLPVPSSDNGVYVIRIGIFPANPDGFFDSFIDSMIVHTGCNEEKDYYLAWFSHRLFGKTDCYRSPRHIISLEFPSLHVVEEALIIQRLRDSVDRQLRDHDFFPYTPRILDAVESNTSIVEIVAHNNDLSCRCDLFECLSRRSTDIESLMFWGESCADAYQAIADGCVQGLKKLTIASNSGSDMDGDKVDTVCEAVSEVGILESLEIDGAIADYDGGGHGLVRVLDTCPLRSLSVNASIFGEDAWSEMVRVLSNMKATDVKFTELEIFRDWMRPAFDALFS 343
            MAAFSTLNHFGVNFGNEDVM RVSFFLNQRDKIA+STSSRRVHQ LKHFLPTASEYVTTVKPNLLPVPSSDNGVYVI IG F ANPDGFFDSFIDSMIVHTGCNEEKDYYLAWFS+RLFGKTDCY SPRHIISLEFP+LH VEEALIIQRLRDSVDRQLRDHDFFPYTPRILDAVESNTSIVEIVAHNND+ CRCDLFECLSRRSTDIESLMFWGESCADAYQAIADGCVQGLKKLTIASN GSDMDGDKVDTVCEAVSEVGILESLE+DGAIADYDGGG GLV VLDTCPLRSLSVNASIFGEDAWSEMVRVLSNMK TDVKFTEL I RDWMRPAFDALFS
Sbjct:   37 MAAFSTLNHFGVNFGNEDVMRRVSFFLNQRDKIALSTSSRRVHQALKHFLPTASEYVTTVKPNLLPVPSSDNGVYVIPIGTFKANPDGFFDSFIDSMIVHTGCNEEKDYYLAWFSYRLFGKTDCYWSPRHIISLEFPTLHTVEEALIIQRLRDSVDRQLRDHDFFPYTPRILDAVESNTSIVEIVAHNNDMPCRCDLFECLSRRSTDIESLMFWGESCADAYQAIADGCVQGLKKLTIASNPGSDMDGDKVDTVCEAVSEVGILESLELDGAIADYDGGGDGLVGVLDTCPLRSLSVNASIFGEDAWSEMVRVLSNMKVTDVKFTELGIVRDWMRPAFDALFS 379          
BLAST of mRNA_Ecto-sp13_S_contig890.20404.1 vs. uniprot
Match: D8LPE6_ECTSI (EsV-1-118 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPE6_ECTSI)

HSP 1 Score: 564 bits (1453), Expect = 1.780e-199
Identity = 285/310 (91.94%), Postives = 289/310 (93.23%), Query Frame = 0
Query:   35 MSTSSRRVHQVLKHFLPTASEYVTTVKPNLLPVPSSDNGVYVIRIGIFPANPDGFFDSFIDSMIVHTGCNEEKDYYLAWFSHRLFGKTDCYRSPRHIISLEFPSLHVVEEALIIQRLRDSVDRQLRDHDFFPYTPRILDAVESNTSIVEIVAHNNDLS-CRCDLFECLSRRSTDIESLMFWGESCADAYQAIADGCVQGLKKLTIASNSGSDMDGDKVDTVCEAVSEVGILESLEIDGAIADYDGGGHGLVRVLDTCPLRSLSVNASIFGEDAWSEMVRVLSNMKATDVKFTELEIFRDWMRPAFDALFS 343
            MS SSR VHQ LKHFLPTASEYVTTVKPNLLPVPSS NGVYVI IG+F A PDGFFDSF D MIVHTGCNEEKDYYL+W SHRLFG+T  YRSPRHIISLEFPSLH VEEALIIQRLRDSVDRQLRDHDFFPYTPRILDAVESNTSIVEIV +NNDLS CRCDLFECLSRRSTDIESL   GESCADA QAIADGCVQGLKKLTIASN GSDMDGDKVDTVCEAVSEVGILESLEIDGAIADYDGGG GLVRVLDTCPLRSLSVNASIFGEDAWSEMVRVLSNMKATDVKFTELEIFRDWMRPAFDALFS
Sbjct:    1 MSASSRGVHQALKHFLPTASEYVTTVKPNLLPVPSSANGVYVIPIGMFNAQPDGFFDSFTDDMIVHTGCNEEKDYYLSWCSHRLFGETSPYRSPRHIISLEFPSLHTVEEALIIQRLRDSVDRQLRDHDFFPYTPRILDAVESNTSIVEIVTNNNDLSPCRCDLFECLSRRSTDIESLEIVGESCADANQAIADGCVQGLKKLTIASNPGSDMDGDKVDTVCEAVSEVGILESLEIDGAIADYDGGGDGLVRVLDTCPLRSLSVNASIFGEDAWSEMVRVLSNMKATDVKFTELEIFRDWMRPAFDALFS 310          
BLAST of mRNA_Ecto-sp13_S_contig890.20404.1 vs. uniprot
Match: A0A6H5J7D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7D8_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 5.190e-57
Identity = 116/277 (41.88%), Postives = 157/277 (56.68%), Query Frame = 0
Query:   69 SSDNGVYVIRIGIFPANPDGFFDSFIDSMIVHTGCNEEKDYYLAWFSHR-LFGKTDCYRSPRHIISLEFPSLHVVEEALIIQRLRDSVDRQLRDHDFFPYTPRILDAVESNTSIVEIVAHNNDLSCRCDLFECLSRRSTDIESLMFWGESCADAYQAIADGCVQGLKKLTIASN-SGSDMDGDKVDTVCEAVSEVGILESLEIDGAIADYDGGGHGLVRVLDTCPLRSLSVNASIFGEDAWSEMVRVLSNMKATDVKFTELEIFRDWMRPAFDALFS 343
            S +NGVY      F  +  G F +F  S+I H G NE++DYY AW   + L       RS R  I L        +E  I++RL +SVD +L DH    YT  I+DA+ESNTSIVE+ A++   SCRC LF C S+RS  I SL   G +C D+ Q IAD CV  LK+L++++  S  +MDG  +  VC+AV+E                  G  GL+R L+TCP+ SL ++ +IF       MVRVL  ++ATDVK T+ + F +W +P FDALFS
Sbjct:    5 SFENGVYSTPPETFLVSAYGNFCNFYRSLITHVGANEDRDYYAAWLEQQQLKLAKGSARSRRRSIDLYTSGRPARDETFIVERLLESVDTRLSDHHILVYTDDIMDAIESNTSIVEVSAYSQTSSCRCRLFNCFSKRSVSITSLDLTGRACIDSTQTIADSCVHDLKRLSLSTGCSDQEMDGLTIALVCDAVAEA-----------------GADGLIRALETCPISSLRIDGTIFDIPCVPGMVRVLPELQATDVKLTQCD-FDNWGKPVFDALFS 263          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Q8QNG1_ESV1K9.200e-23594.46EsV-1-118 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPE6_ECTSI1.780e-19991.94EsV-1-118 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5J7D8_9PHAE5.190e-5741.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig890contigEcto-sp13_S_contig890:2133..3185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig890.20404.1mRNA_Ecto-sp13_S_contig890.20404.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig890 2133..3290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig890.20404.1 ID=prot_Ecto-sp13_S_contig890.20404.1|Name=mRNA_Ecto-sp13_S_contig890.20404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=351bp
MAAFSTLNHFGVNFGNEDVMSRVSFFLNQRDKIAMSTSSRRVHQVLKHFL
PTASEYVTTVKPNLLPVPSSDNGVYVIRIGIFPANPDGFFDSFIDSMIVH
TGCNEEKDYYLAWFSHRLFGKTDCYRSPRHIISLEFPSLHVVEEALIIQR
LRDSVDRQLRDHDFFPYTPRILDAVESNTSIVEIVAHNNDLSCRCDLFEC
LSRRSTDIESLMFWGESCADAYQAIADGCVQGLKKLTIASNSGSDMDGDK
VDTVCEAVSEVGILESLEIDGAIADYDGGGHGLVRVLDTCPLRSLSVNAS
IFGEDAWSEMVRVLSNMKATDVKFTELEIFRDWMRPAFDALFSLMRKLNK
*
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