prot_Ecto-sp13_S_contig8895.20393.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8895.20393.1
Unique Nameprot_Ecto-sp13_S_contig8895.20393.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length226
Homology
BLAST of mRNA_Ecto-sp13_S_contig8895.20393.1 vs. uniprot
Match: D7FXB6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXB6_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 1.170e-123
Identity = 207/221 (93.67%), Postives = 208/221 (94.12%), Query Frame = 0
Query:    6 AMTFATSRAGNATGLMRSLCSLMPISITLVSCSSSYAXXXXXXXXXXXXS-RGFALKPRGGASEEEASTPVCRPRDSGTNKHSFRSMGHPAVPDGLRLKQVVVICRHGDRAPVSSSLGKILDDGPDSVKLWNSKLPPKEERPKPLLLGAEELRLVGEGLRGVLEGGGDEVVGGEGSLFPAGLEAEKSAIFVRCTRLKRTHQSAQNMLEGLGLKDGVDLYVR 225
            AM F+TSRAGNATGLMRSLCSLMPISITLVSCSSSYAXXXXXXXXXXXX  RGFALK RGGASEEEAST VC PRDSGTNKHSFRS GHPAVPDGLRLKQVVVICRHGDRAPVSSSLGKILDDGPDSVKLWNSKLPPKEER  P   GAEELRLVGEGLRGVLEGGGDE VGGEGSLFPAGLEAEKSAIFVRCTRLKRTHQSAQNMLEGLGLKDGVDLYVR
Sbjct:    3 AMAFSTSRAGNATGLMRSLCSLMPISITLVSCSSSYAXXXXXXXXXXXXXXRGFALKTRGGASEEEASTSVCSPRDSGTNKHSFRSTGHPAVPDGLRLKQVVVICRHGDRAPVSSSLGKILDDGPDSVKLWNSKLPPKEERYDPPR-GAEELRLVGEGLRGVLEGGGDEGVGGEGSLFPAGLEAEKSAIFVRCTRLKRTHQSAQNMLEGLGLKDGVDLYVR 222          
BLAST of mRNA_Ecto-sp13_S_contig8895.20393.1 vs. uniprot
Match: A0A4D9CYH8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYH8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.850e-11
Identity = 60/192 (31.25%), Postives = 84/192 (43.75%), Query Frame = 0
Query:   66 ASEEEASTPVCRPRDSGTNKHSFRSMG--HPAVPDGLRLKQVVVICRHGDRAPVSSSLGKILDDGPDSVKLWNSKLPPKEE----------------------RPKPLLL--GAEELRLVGEGLR-----------GVLEGGGDEVVGGEGSLFPA------GLEAEKSAIFVRCTRLKRTHQSAQNMLEGL 214
            A+    STP   P    T+ HS+R     + A P   +L+QVV+I RHGDRAP++ ++G+ + D P++  LW SKLP  +E                       P   L   GA+EL+ +G  LR             L   G       G L  A         +  S +  R T ++RT QSAQN+L GL
Sbjct:   18 ATRIACSTPNSSPSSHSTH-HSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLRASGGHAPHASGGLSSAPSSXXXXXSSPHSFLHARATNIRRTQQSAQNLLLGL 208          
BLAST of mRNA_Ecto-sp13_S_contig8895.20393.1 vs. uniprot
Match: W7T6G5_9STRA (Histidine acid (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6G5_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.880e-11
Identity = 59/186 (31.72%), Postives = 81/186 (43.55%), Query Frame = 0
Query:   72 STPVCRPRDSGTNKHSFRSMG--HPAVPDGLRLKQVVVICRHGDRAPVSSSLGKILDDGPDSVKLWNSKLPPKEE----------------------RPKPLLL--GAEELRLVGEGLR-----------GVLEGGGDEVVGGEGSLFPA------GLEAEKSAIFVRCTRLKRTHQSAQNMLEGL 214
            STP   P    T+ HS+R     + A P   +L+QVV+I RHGDRAP++ ++G+ + D P++  LW SKLP  +E                       P   L   GA+EL+ +G  LR             L   G       G L  A            S +  R T ++RT QSAQN+L GL
Sbjct:   63 STPTSSPSSHSTH-HSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSXXXXXXXXXXSFLHARATNIRRTQQSAQNLLLGL 247          
BLAST of mRNA_Ecto-sp13_S_contig8895.20393.1 vs. uniprot
Match: K8YWC2_NANGC (Histidine acid (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWC2_NANGC)

HSP 1 Score: 65.9 bits (159), Expect = 4.840e-10
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   72 STPVCRPRDSGTNKHSFRSMG--HPAVPDGLRLKQVVVICRHGDRAPVSSSLGKILDDGPDSVKLWNSKLPPKEE 144
            STP   P    T+ HS+R     + A P   +L+QVV+I RHGDRAP++ ++G+ + D P++  LW SKLP  +E
Sbjct:   24 STPTSSPSSHSTH-HSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQE 97          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8895.20393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXB6_ECTSI1.170e-12393.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CYH8_9STRA2.850e-1131.25Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7T6G5_9STRA2.880e-1131.72Histidine acid (Fragment) n=1 Tax=Nannochloropsis ... [more]
K8YWC2_NANGC4.840e-1042.67Histidine acid (Fragment) n=1 Tax=Nannochloropsis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029033Histidine phosphatase superfamilyGENE3D3.40.50.1240coord: 94..225
e-value: 2.0E-17
score: 65.2
IPR029033Histidine phosphatase superfamilySUPERFAMILY53254Phosphoglycerate mutase-likecoord: 93..214
IPR033379Histidine acid phosphatase active sitePROSITEPS00616HIS_ACID_PHOSPHAT_1coord: 102..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 24..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8895contigEcto-sp13_S_contig8895:639..6560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8895.20393.1mRNA_Ecto-sp13_S_contig8895.20393.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8895 342..6560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8895.20393.1 ID=prot_Ecto-sp13_S_contig8895.20393.1|Name=mRNA_Ecto-sp13_S_contig8895.20393.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=226bp
MLQMLAMTFATSRAGNATGLMRSLCSLMPISITLVSCSSSYAAAAAGTSS
GGGSSRGFALKPRGGASEEEASTPVCRPRDSGTNKHSFRSMGHPAVPDGL
RLKQVVVICRHGDRAPVSSSLGKILDDGPDSVKLWNSKLPPKEERPKPLL
LGAEELRLVGEGLRGVLEGGGDEVVGGEGSLFPAGLEAEKSAIFVRCTRL
KRTHQSAQNMLEGLGLKDGVDLYVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029033His_PPase_superfam
IPR033379Acid_Pase_AS