prot_Ecto-sp13_S_contig8889.20382.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8889.20382.1
Unique Nameprot_Ecto-sp13_S_contig8889.20382.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length175
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8889.20382.1 vs. uniprot
Match: Q8QNC2_ESV1K (EsV-1-160 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC2_ESV1K)

HSP 1 Score: 69.3 bits (168), Expect = 1.510e-10
Identity = 65/167 (38.92%), Postives = 87/167 (52.10%), Query Frame = 0 
Query:    9 GALFGSVSNCDIDRVTLRGSVDFDSSSTGDCGGMMGQITYHATATNWRNLATFPNGLSGENVGGICGNFDGWFVTASNWLNAMSGDINGQWS-GGLIGY-IQYGGSLQSLVNSMTGDITSTSQSAA--GGVVGYILSSYSFDGQRWLNYMKGDITAPT-GGGGIIGS 170
            G LFG     D+  VTLRGS+    SST   GG+ G   Y+++ T  RNLA FPNG+SG +VGGI G+     +T    +NAM GD++G +  GG+IG   Q     +++V                 G    Y  SS   D   W+NYM G+IT+ T   GGIIG+
Sbjct:  163 GVLFGRARG-DVYGVTLRGSIYCTGSSTTCAGGVCG-YGYYSSMTMIRNLAIFPNGISGLSVGGIAGSAHRTSLTRC--VNAMIGDMHGTYRCGGIIGDGSQMSKDCKNVVXXXXXXXXXXXXXXXXMGRFATYNSSS---DFTEWMNYMSGNITSMTLSCGGIIGT 322
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8889.20382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNC2_ESV1K1.510e-1038.92EsV-1-160 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8889contigEcto-sp13_S_contig8889:123..647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8889.20382.1mRNA_Ecto-sp13_S_contig8889.20382.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8889 123..659 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8889.20382.1 ID=prot_Ecto-sp13_S_contig8889.20382.1|Name=mRNA_Ecto-sp13_S_contig8889.20382.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=175bp
MTSTADNRGALFGSVSNCDIDRVTLRGSVDFDSSSTGDCGGMMGQITYHA
TATNWRNLATFPNGLSGENVGGICGNFDGWFVTASNWLNAMSGDINGQWS
GGLIGYIQYGGSLQSLVNSMTGDITSTSQSAAGGVVGYILSSYSFDGQRW
LNYMKGDITAPTGGGGIIGSFTRV*
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