prot_Ecto-sp13_S_contig8887.20380.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8887.20380.1
Unique Nameprot_Ecto-sp13_S_contig8887.20380.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length459
Homology
BLAST of mRNA_Ecto-sp13_S_contig8887.20380.1 vs. uniprot
Match: D7FJ63_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ63_ECTSI)

HSP 1 Score: 788 bits (2035), Expect = 8.510e-285
Identity = 399/459 (86.93%), Postives = 417/459 (90.85%), Query Frame = 0
Query:    1 MKAAAAKFLEEEARVKADKEEKMTKFRDSACDAAARTIQQMYYVFSATRITQKRAKEVYTKHFDSENLAFYWHNTLIDTYLWEKPTGLGGWDADPEDRWEVIAGSYKLHYYFNPKSYTMQWSQPAGTVICKECGLQFSMRWCNRDSKPFCDACYEARHFSQENPSTGPLSYKTLDGAVPGSKDLVDFDYISEQSDIAVETWEQQPSSLAVEGQQVVPIPEVLEAAALDDAGAAGSDGGSQYAVQQYVAGTSDIVRYGRSDGEPPGVLQPAGVRDEADGGTGESEMEEYLNSQQTFTYDNPSEGISNAEQIEHIGGNDNSFNTPNGALREGGGNNTRAVPGGSNDVAWEEKKEGVEASASGIGTASFAPESWGWATPGSASSGDDGRVESANS-GKFFDGVMDCPATGPLPAGLGKKTTTNNGSVRLGGGEAASIAGMEGVVKAEASEYNPSTPSYGFDE 458
            MKAAAAKFLEEEARVKADKEEKMTKFRDSACDAAARTIQQMYYVFSATRITQKRAKEVYTKHFDSENLAFYWHNTLIDTYLWEKPTGLGGWD DPEDRWEVI GSY LHYYFNPKSYTMQWSQPAGTVICKEC LQFS RW NRDS PFCD CY+ARHFS+ENPSTGPLSYKTLDGAVPGSKDLVDFDYISEQ DIAVETWEQQPSSLA+EGQ VVPIPE  EA+ALDDAGA+GSDGGSQYAVQ YVAGTSDIV YGRSD EP    QPAGVRDEADGGTGESEMEEYL+SQQTFTYDNPSEGI NAEQ   +GGNDNS NTPNGAL EG  ++TR V GGS+DVAWE+KKEG +ASASG+G ASFAPE+WGWATPGSASS D GRVE ANS G+F DGVMDCPATGPLPAG G+K  TNNGSV LGGGEAASIAGMEG+VKAEA EY+PSTPSYG DE
Sbjct:   72 MKAAAAKFLEEEARVKADKEEKMTKFRDSACDAAARTIQQMYYVFSATRITQKRAKEVYTKHFDSENLAFYWHNTLIDTYLWEKPTGLGGWDVDPEDRWEVIPGSYNLHYYFNPKSYTMQWSQPAGTVICKECDLQFSTRWRNRDSTPFCDTCYDARHFSKENPSTGPLSYKTLDGAVPGSKDLVDFDYISEQPDIAVETWEQQPSSLAIEGQPVVPIPEAPEASALDDAGASGSDGGSQYAVQHYVAGTSDIVGYGRSDDEP----QPAGVRDEADGGTGESEMEEYLDSQQTFTYDNPSEGILNAEQTVDVGGNDNSLNTPNGALPEGSDSSTRGVAGGSSDVAWEKKKEGAKASASGVGAASFAPETWGWATPGSASSDDGGRVERANSSGEFHDGVMDCPATGPLPAGFGEKAATNNGSVGLGGGEAASIAGMEGLVKAEAGEYDPSTPSYGLDE 526          
BLAST of mRNA_Ecto-sp13_S_contig8887.20380.1 vs. uniprot
Match: A0A6H5JES2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES2_9PHAE)

HSP 1 Score: 661 bits (1706), Expect = 1.060e-225
Identity = 358/505 (70.89%), Postives = 381/505 (75.45%), Query Frame = 0
Query:    1 MKAAAAKFLEEEARVKADKEEKMTKFRDSACDAAARTIQQMYYVFSATRITQKRAKEVYTKHFDSENLAFYWHNTLIDTYLWEKPTGLGGWDADPEDRWEVIAGSYKLHYYFNPKSYTMQWSQPAGTVICKECGLQFSMRWCNRDSKPFCDACYEARHFSQENPSTGP-----------------------------------------------LSYKTLDGAVPGSKDLVDFDYISEQSDIAVETWEQQPSSLAVEGQQVVPIPEVLEAAALDDAGAAGSDGGSQYAVQQYVAGTSDIVRYGRSDGEPPGVLQPAGVRDEADGGTGESEMEEYLNSQQTFTYDNPSEGISNAEQIEHIGGNDNSFNTPNGALREGGGNNTRAVPGGSNDVAWEEKKEGVEASASGIGTASFAPESWGWATPGSASSGDDGRVESANSGKFFDGVMDCPATGPLPAGLGKKTTTNNGSVRLGGGEAASIAGMEGVVKAEASEYNPSTPSYGFDE 458
            MKAAAAKFL EEARVKADKEEKMTKFR SACDAAARTIQQMYYVFSATRITQKRAKEVYTKHFDSENLAFYWHNTLIDTYLW+KPTGLGGWD DPEDR                                 EC LQFS RWCNRDSKPFCD CY+ARHFS+ENPSTGP                                               LSYKTLDGAVPGSK+LVD DYISEQ DIAVETWEQQPSSLA+EG  VVPIPE  +A+ALDDAGAAG DGGSQYAVQQ+  G SDIV +GRSD EP GVLQPAGVRDEADGGTGESEMEEYL+SQQTFTYDNPSEGISNAEQI  +GGNDNSFNTPNGAL EG  NNTR V  GS+DVAWE KK+G EASASG+G AS APE+WGWATPGSA S D GRVESA+SG+F DGV DCPATGPLPAGL +K TTNN SV    GEAASIAG+EG++KAEASEY+PSTPSYG D+
Sbjct:  704 MKAAAAKFLAEEARVKADKEEKMTKFRGSACDAAARTIQQMYYVFSATRITQKRAKEVYTKHFDSENLAFYWHNTLIDTYLWKKPTGLGGWDVDPEDR---------------------------------ECDLQFSTRWCNRDSKPFCDTCYDARHFSKENPSTGPNPVTPTISKVNILAKAADFKPSTTIGRRQALSTKHILLDSARTNVQPLSYKTLDGAVPGSKELVDLDYISEQPDIAVETWEQQPSSLAIEGHPVVPIPEAPKASALDDAGAAGGDGGSQYAVQQHATGASDIVGFGRSDDEPSGVLQPAGVRDEADGGTGESEMEEYLDSQQTFTYDNPSEGISNAEQIVDVGGNDNSFNTPNGALAEGSDNNTRGVVDGSSDVAWE-KKKGAEASASGVGAASIAPETWGWATPGSAWSDDGGRVESASSGEFHDGVTDCPATGPLPAGLQEKDTTNNVSVGPEEGEAASIAGIEGLMKAEASEYDPSTPSYGLDK 1174          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8887.20380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJ63_ECTSI8.510e-28586.93WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JES2_9PHAE1.060e-22570.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 125..169
score: 8.631
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 93..126
score: 8.946

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8887contigEcto-sp13_S_contig8887:1912..5671 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8887.20380.1mRNA_Ecto-sp13_S_contig8887.20380.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8887 1912..5686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8887.20380.1 ID=prot_Ecto-sp13_S_contig8887.20380.1|Name=mRNA_Ecto-sp13_S_contig8887.20380.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=459bp
MKAAAAKFLEEEARVKADKEEKMTKFRDSACDAAARTIQQMYYVFSATRI
TQKRAKEVYTKHFDSENLAFYWHNTLIDTYLWEKPTGLGGWDADPEDRWE
VIAGSYKLHYYFNPKSYTMQWSQPAGTVICKECGLQFSMRWCNRDSKPFC
DACYEARHFSQENPSTGPLSYKTLDGAVPGSKDLVDFDYISEQSDIAVET
WEQQPSSLAVEGQQVVPIPEVLEAAALDDAGAAGSDGGSQYAVQQYVAGT
SDIVRYGRSDGEPPGVLQPAGVRDEADGGTGESEMEEYLNSQQTFTYDNP
SEGISNAEQIEHIGGNDNSFNTPNGALREGGGNNTRAVPGGSNDVAWEEK
KEGVEASASGIGTASFAPESWGWATPGSASSGDDGRVESANSGKFFDGVM
DCPATGPLPAGLGKKTTTNNGSVRLGGGEAASIAGMEGVVKAEASEYNPS
TPSYGFDE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
IPR001202WW_dom