prot_Ecto-sp13_S_contig8876.20368.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8876.20368.1
Unique Nameprot_Ecto-sp13_S_contig8876.20368.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length605
Homology
BLAST of mRNA_Ecto-sp13_S_contig8876.20368.1 vs. uniprot
Match: A0A6H5JF69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF69_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 5.010e-83
Identity = 355/713 (49.79%), Postives = 369/713 (51.75%), Query Frame = 0
Query:   58 DRYRPPPDDGHGAPAFTIRPTGA-GTGRTAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRDGHYRPARDDGYGVGAARGAGSGGSH----------------------------------PRRGQGIGXXXXXXXXX-----------------------------------HFSPLRSGRARAPPHAVPSKPGGGYSSSGAGSTMHGRXIAHXXXXXXXXXXXXXXXXXXXTANRGRPDMGVDAAGPMGRVGPVGNPGRGFGAAGAAATPSTTETPGGRPHGLEEVAGLDDGRAARREADALRATILAGARARVAVPLQRAFRARRRSRAEAXXXXAREQAVREACAAVRLQAVMRGLAGREFARGE--------------------------------------------------------------------------------------------CGRRXXXXXXXXXXXXXRAARGRVAALRMVLAAMARARVAVPLQRAFRARRRSRTEAXXXXXREQAVREXXXXXXXXXXXXXXXGRRFAPGERSRRTMAVLVXXXXXXXXXXXHVAALRAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGTWSVLLLQG---MPCGRTSLASGEGPMAVGECIESEGGSRYLGWVPGVSWKARLTVTTDGAVYSGTDGKEV 605
            DRYRP PDDGHGAPAFTIRPTGA G  R  G XXXX  XXXXXXXXXXXXXXXXXXXXXXE+RDG+YRPARDDG+GVG ARGAG                                       P+ G  +G      XXX                                   H SPLR GRAR P HAVPSK GGGYSSS AG T+HG  IAH                   TANRG PDMGVDAAGPM R G  G P RGFGA GAAATP+TTETPGG PHGLEEVAGLDD    +   +  +  I+   R                  AEA    AREQA R+A AAVRLQAVMRG  GREFARGE                                                                                                XXXXXXXXXXXXX                                        XXXXX       XXXXXXXXXXXXXX GR FA GERSRRTMAVL+           HVAALRAEAA XXXXXX           XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX VAVGTWSVLLLQG   +PCGRTSLASGEGPMAVGECIESEGGSRYLGWVPGVSWKARLTVTTDGAVYSGTDGKEV
Sbjct:    2 DRYRPHPDDGHGAPAFTIRPTGASGAARAGGGXXXXAKXXXXXXXXXXXXXXXXXXXXXXEERDGYYRPARDDGHGVGTARGAGXXXXXXXXXXXXXXXXXXXXNAPRDWPGRDRGETFKHHGPQPGDAVGASRRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHISPLRGGRARVPTHAVPSKRGGGYSSSWAGPTLHGPGIAHGDRGHFQLAQGGSQGLGGGTANRGGPDMGVDAAGPMERAGRTGCPARGFGAEGAAATPNTTETPGGWPHGLEEVAGLDDVERLQLGREQFQREIIQKIR---------------EWEAEAP---AREQAARKARAAVRLQAVMRGRVGREFARGERSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGREFARGERSRRTMAVLMQAAYRGRAARRHVAALRAEAAAXXXXXXEGALEEEMARHXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXVVAVGTWSVLLLQGPLSVPCGRTSLASGEGPMAVGECIESEGGSRYLGWVPGVSWKARLTVTTDGAVYSGTDGKEV 696          
BLAST of mRNA_Ecto-sp13_S_contig8876.20368.1 vs. uniprot
Match: D8LF92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF92_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 1.030e-66
Identity = 292/488 (59.84%), Postives = 303/488 (62.09%), Query Frame = 0
Query:  188 SSSGAGSTMHGRXIAHXXXXXXXXXXXXXXXXXXXTANRGRPDMGVDAAGPMGRVGPVGNPGRGFGAAGAAATPSTTETPGGRPHGLEEVAGLDD----------------------------------------------------GR-------------AARREADALRATILAGARARVAVPLQRAFRARRRSRAEAXXXXAREQAVREACAAVRLQAVMRGLAGREFARGECGRRXXXXXXXXXXXXXRAARGRVAALRMVLAAMARARVAVPLQRAFRARRRSRT-EAXXXXXREQAVREXXXXXXXXXXXXXXXGRRFAPGERSRRTMAVLVXXXXXXXXXXX-HVAALRAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGTWSVLLLQG---MPCGRTSLASGEGPMAVGECIESEGGSRYLGWVPGVSWKARLTVTTDGAVYSGTDGKEV 605
            + SGAG T+HGR +AH  XXXXXXXXXXXXXXXXX      PDMGVDAAGPMG VGP+GNPGRGFGAAGAAA+ +TTE PGG PHGLEEVA LDD                                                    GR             AARREADALRA IL  ARA+VA+ LQRAFRARRRSRA+A    AREQA REA AAVRLQAV        F RGE    XXXXXXXXXXXXX    G VA  R    A                       EA   XX       XXX            GR FA GER         XXXXXXXXX   HVAALRAEAAXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGTW VLLLQG   +PCGRTSLASGEGPMAVGEC+ESEGGSRYLGWVPGVSWKARLTVT DGAVYSGTDGKEV
Sbjct:  311 AGSGAGPTLHGRGMAHGDXXXXXXXXXXXXXXXXXXXXXXXPDMGVDAAGPMGWVGPMGNPGRGFGAAGAAASSNTTEAPGGWPHGLEEVADLDDVSPAGNPRKPRNLAEERLQLGREKFQSDIMQKIRGWEARAAARLQVVVRDREGREFTCGERRRLTSMAARREADALRAAILTRARAKVALSLQRAFRARRRSRAKAATAVAREQAAREARAAVRLQAVXXXXXXXXFVRGEXXXXXXXXXXXXXXXXXXXXXGHVAEWRAAREAREXXXXXXXXXXXXXXXXXXXXXEARDAXXXXXXXXXXXXAVRLQAVMRGRAGRGFARGERRXXXXXXXXXXXXXXXXXARRHVAALRAEAAXXXXXXXXXXXXXQMARIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGTWPVLLLQGPLSVPCGRTSLASGEGPMAVGECVESEGGSRYLGWVPGVSWKARLTVTDDGAVYSGTDGKEV 798          
BLAST of mRNA_Ecto-sp13_S_contig8876.20368.1 vs. uniprot
Match: D7FWA7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWA7_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 1.800e-42
Identity = 193/289 (66.78%), Postives = 197/289 (68.17%), Query Frame = 0
Query:  322 EAXXXXAREQAVREACAAVRLQAVMRGLAGREFARGECGRRXXXXXXXXXXXXXRAARGRVAALRMVLAAMARARVAVPLQRAFRARRRSRT-EAXXXXXREQAVREXXXXXXXXXXXXXXXGRRFAPGERSR-RTMAVLVXXXXXXXXXXXHVAALRAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGTWSVLLLQG---MPCGRTSLASGEGPMAVGECIESEGGSRYLGWVPGVSWKARLTVTTDGAVYSGTDGKEV 605
            EA     REQA REA AAVRLQAVMRG AGREF RGE  R    XXXXXXXXXX   RG+VAA R                            EA     REQA RE               GR FA GER R  +     XXXXXXXX   HVAALRAEAAXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGTW VLLLQG   +PCGRTSLASGEGPMAVGEC+ESEGGSRYLGWVPGVSWKARLTVT DGAVYSGTDGKEV
Sbjct:   47 EARDAATREQATREARAAVRLQAVMRGRAGREFVRGERSRLTSMXXXXXXXXXXXXXRGQVAARRAAXXXXXXXXXXXXXXXXXXXXXXXXVVEARDAATREQAAREARAAVRLQAVMRGRAGRGFARGERRRLASXXXXXXXXXXXXXARRHVAALRAEAAXXXXXXXXXXXXXQMARIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGTWPVLLLQGPLSVPCGRTSLASGEGPMAVGECVESEGGSRYLGWVPGVSWKARLTVTDDGAVYSGTDGKEV 335          
BLAST of mRNA_Ecto-sp13_S_contig8876.20368.1 vs. uniprot
Match: A0A6H5K441_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K441_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.310e-8
Identity = 37/57 (64.91%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  223 TANRGRPDMGVDAAGPMGRVGPVGNPGRGFGAAGAAATPSTTETPGGRPHGLEEVAG 279
            TANRG PDMGVDAAGPM R G  G P RGFG  GAA TP+TT TPG  P  L  + G
Sbjct:  209 TANRGGPDMGVDAAGPMARAGRTGYPARGFGVEGAAVTPNTTGTPGVGPRALAGIVG 265          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8876.20368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JF69_9PHAE5.010e-8349.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF92_ECTSI1.030e-6659.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWA7_ECTSI1.800e-4266.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K441_9PHAE1.310e-864.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 485..505
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..519
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 520..544
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 545..605
NoneNo IPR availableTMHMMTMhelixcoord: 521..543
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 362..391
score: 6.925
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 427..455
score: 7.51
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 338..364
score: 6.797
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 453..482
score: 7.913

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8876contigEcto-sp13_S_contig8876:328..5542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8876.20368.1mRNA_Ecto-sp13_S_contig8876.20368.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8876 328..5542 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8876.20368.1 ID=prot_Ecto-sp13_S_contig8876.20368.1|Name=mRNA_Ecto-sp13_S_contig8876.20368.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=605bp
MPGLGHGGGGRGRGRGGGRDGAGGGGRGRGHALSGEGGRHRGHASRGERG
WGRDERPDRYRPPPDDGHGAPAFTIRPTGAGTGRTAGSGGGGAKASAEGG
GRGWGNATRDQRRWGREKRDGHYRPARDDGYGVGAARGAGSGGSHPRRGQ
GIGGVGGGGGGGHFSPLRSGRARAPPHAVPSKPGGGYSSSGAGSTMHGRG
IAHGDRGHFQSTQGGSQGLGGGTANRGRPDMGVDAAGPMGRVGPVGNPGR
GFGAAGAAATPSTTETPGGRPHGLEEVAGLDDGRAARREADALRATILAG
ARARVAVPLQRAFRARRRSRAEAAAAAAREQAVREACAAVRLQAVMRGLA
GREFARGECGRRTSIAVLVQAVYRGRAARGRVAALRMVLAAMARARVAVP
LQRAFRARRRSRTEAAAAAAREQAVREARAAVRLQAVMRGRAGRRFAPGE
RSRRTMAVLVQAAYRGRAARRHVAALRAEAAAAAAAALEGALEEEIARHE
AAEARAAAVAATALARRKGWWWWQLVMLLMTVVVAVGTWSVLLLQGMPCG
RTSLASGEGPMAVGECIESEGGSRYLGWVPGVSWKARLTVTTDGAVYSGT
DGKEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS