prot_Ecto-sp13_S_contig8867.20360.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8867.20360.1
Unique Nameprot_Ecto-sp13_S_contig8867.20360.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length98
Homology
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Match: D7FTB4_ECTSI (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB4_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 2.370e-46
Identity = 90/109 (82.57%), Postives = 91/109 (83.49%), Query Frame = 0
Query:    1 ASSWVRVGSVSDFPTNGGAAVLYGKSQLA--------EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLK--RCVP-FSYANMRLLTFPVKVEDDGVFL 98
            ASSWVRVGSVSDFPTNGGAAVLYGKSQLA        EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLK   C+      NMRLLTFPVKVED GVFL
Sbjct:  876 ASSWVRVGSVSDFPTNGGAAVLYGKSQLAVYNVARRNEWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKSGECLDHMEDDNMRLLTFPVKVEDGGVFL 984          
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Match: A0A835YW55_9STRA (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW55_9STRA)

HSP 1 Score: 127 bits (320), Expect = 3.490e-32
Identity = 62/105 (59.05%), Postives = 76/105 (72.38%), Query Frame = 0
Query:    2 SSWVRVGSVSDFPTNGGAAVLYGKSQLA--------EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKRCVPFSYANMRLLTFPVKVEDDGVFL 98
            ++WV++G V DFP +GGA V YG+SQLA        EWYATQNVCPHKRALVLS+GI+GS+ GI KVACPLHK NF L+         M ++TFPVKVE+  V+L
Sbjct:  868 TTWVKMGVVDDFPVDGGATVKYGESQLAVYRFESRNEWYATQNVCPHKRALVLSQGIIGSKNGIPKVACPLHKKNFSLQTGACLDDDEMSVMTFPVKVEEGAVYL 972          
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Match: A0A6N9CBF1_9BACT (Nitrite reductase small subunit NirD n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A6N9CBF1_9BACT)

HSP 1 Score: 121 bits (303), Expect = 6.870e-30
Identity = 58/103 (56.31%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    4 WVRVGSVSDFPTNGGAAVLYGKSQLA--------EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKRCVPFSYANMRLLTFPVKVEDDGVFL 98
            WV+VGSVSDFP +GGAA+ YGK+Q+A        EWYATQN+CPHK+A VLS GI+G  +G  K+ACPLHK  F L+     S  +  +LTFPVKV+D+ V+L
Sbjct:  871 WVKVGSVSDFPYDGGAAIKYGKTQIAVFNFFSRGEWYATQNMCPHKKAFVLSRGIIGDAQGAPKIACPLHKKTFCLESGACLSGEDYEVLTFPVKVKDNDVYL 973          
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Match: A0A257WJA4_9BURK (Nitrite reductase (NAD(P)H) small subunit n=1 Tax=Burkholderiales bacterium 12-64-5 TaxID=1970494 RepID=A0A257WJA4_9BURK)

HSP 1 Score: 114 bits (286), Expect = 8.460e-30
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 0
Query:    1 ASSWVRVGSVSDFPTNGGAAVLYGKSQLA--------EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKRCVPFSYANMRLLTFPVKVEDDGVFL 98
            A +W +VG V+DFP +G A V YGK Q+A        EW+ATQN+CPHK+A VLS GIVG ++G  KVACPLHK NF LK     S  + +L TFPV++E++ V+L
Sbjct:   80 ARTWFKVGRVTDFPEDGAATVKYGKVQIAVYNFTSRGEWFATQNMCPHKQAFVLSRGIVGDQQGEPKVACPLHKKNFSLKSGACLSGEDYQLETFPVRIENESVYL 185          
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Match: UPI00146AE1A0 (nitrite reductase small subunit NirD n=1 Tax=Flavivirga algicola TaxID=2729136 RepID=UPI00146AE1A0)

HSP 1 Score: 108 bits (269), Expect = 2.440e-28
Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = 0
Query:    2 SSWVRVGSVSDFPTNGGAAVLYGKSQLA--------EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKRCVPFSYANMRLLTFPVKVEDDGVFL 98
            S+W RVG VSDFP N GA + Y   Q+A        +WYATQN+CPHK  +VLS G++G ++ I KVACP+HK NF L+     +  ++++ T+PVK+ED  V++
Sbjct:   17 STWFRVGEVSDFPENSGACIKYKTKQIAVYNFTRTSKWYATQNLCPHKMEMVLSLGMIGDKDDIPKVACPMHKKNFSLEDGSNLAGEDLKIATYPVKIEDGNVYI 121          
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Match: A0A5C5X7K4_9PLAN (Nitrite reductase [NAD(P)H] n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X7K4_9PLAN)

HSP 1 Score: 114 bits (286), Expect = 2.700e-28
Identity = 55/103 (53.40%), Postives = 67/103 (65.05%), Query Frame = 0
Query:    4 WVRVGSVSDFPTNGGAAVLYGKSQLA--------EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKRCVPFSYANMRLLTFPVKVEDDGVFL 98
            W +VG+V DFP +GGA + YGKSQ+A        EWYA+QN+CPHK+A VLS GIVG   G  KVACPLHK  F L+        +  + TFPVKVED  V+L
Sbjct:  261 WTQVGTVDDFPVDGGATIKYGKSQIAVFRFESRGEWYASQNMCPHKKAFVLSRGIVGDEAGTPKVACPLHKKTFSLESGESLQGEDYHITTFPVKVEDGNVYL 363          
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Match: A0A6U3NRT0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NRT0_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.620e-28
Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    3 SWVRVGSVSDFPTNGGAAVLYGKSQLA--------EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKRCVPFSYANMRLLTFPVKVEDDGVFL 98
            SWV+VG+ SDF  N G+ +LYG SQLA        EWY TQN+CPHK+A VLS+GI+GS EG  KVACPLHK  F L+    F   +++L+TFPVK+E D V +
Sbjct:  264 SWVKVGTTSDFDPNVGSPILYGDSQLAVFNNAHRGEWYCTQNMCPHKQAFVLSQGIIGSFEGAPKVACPLHKKQFSLEDGHQFD-GDLKLITFPVKIEGDDVMV 366          
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Match: UPI000412123A (nitrite reductase small subunit NirD n=1 Tax=Gaetbulibacter saemankumensis TaxID=311208 RepID=UPI000412123A)

HSP 1 Score: 106 bits (265), Expect = 9.870e-28
Identity = 49/105 (46.67%), Postives = 68/105 (64.76%), Query Frame = 0
Query:    2 SSWVRVGSVSDFPTNGGAAVLYGKSQLA--------EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKRCVPFSYANMRLLTFPVKVEDDGVFL 98
            S+W  VG VSDFP N GA + Y   Q+A        +WYA QN+CPHK  +VLS G++G +EGI KVACP+HK NF L+        ++++  +PVKVED+ V++
Sbjct:   17 STWFNVGVVSDFPENSGACIKYKTKQIAVYNFVRKGKWYACQNLCPHKMEMVLSLGMIGDKEGIAKVACPMHKKNFSLEDGSNLGGDDLKIAVYPVKVEDENVYI 121          
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Match: A0A7R9W3I0_9STRA (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3I0_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.500e-27
Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    3 SWVRVGSVSDFPTNGGAAVLYGKSQLA--------EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKRCVPFSYANMRLLTFPVKVEDDGVFL 98
            SWV VGSVSDF  + G+ +L G +QLA        EW+ TQN+CPHK+A VLS+GI+GS +G+ KVACPLHK  F L+        ++R+LTFP+KVEDD V +
Sbjct:  677 SWVEVGSVSDFAPDVGSPILIGDTQLAVFNFASRGEWHCTQNMCPHKQAFVLSQGIMGSLDGVAKVACPLHKKQFGLETGEQLDGGDLRILTFPIKVEDDKVLV 780          
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Match: A0A4S1DRW3_9FLAO (Nitrite reductase small subunit NirD n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A4S1DRW3_9FLAO)

HSP 1 Score: 105 bits (261), Expect = 4.000e-27
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0
Query:    4 WVRVGSVSDFPTNGGAAVLYGKSQLA--------EWYATQNVCPHKRALVLSEGIVGSREGILKVACPLHKNNFDLKRCVPFSYANMRLLTFPVKVEDDGVFL 98
            W  VG VSDFP N GA + Y   Q+A        +WYATQN+CPHK  +VLS G++G ++ I KVACP+HK NF LK     +  ++++ T+PVK+ED  V++
Sbjct:   19 WFNVGVVSDFPENSGACIKYKTKQIAVYNFTRTSKWYATQNLCPHKMEMVLSLGMIGDKDDIPKVACPMHKKNFSLKDGSNLAGEDLKIATYPVKIEDGNVYI 121          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8867.20360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTB4_ECTSI2.370e-4682.57Pyridine nucleotide-disulfide oxidoreductase domai... [more]
A0A835YW55_9STRA3.490e-3259.05Pyridine nucleotide-disulfide oxidoreductase domai... [more]
A0A6N9CBF1_9BACT6.870e-3056.31Nitrite reductase small subunit NirD n=1 Tax=Candi... [more]
A0A257WJA4_9BURK8.460e-3052.83Nitrite reductase (NAD(P)H) small subunit n=1 Tax=... [more]
UPI00146AE1A02.440e-2846.67nitrite reductase small subunit NirD n=1 Tax=Flavi... [more]
A0A5C5X7K4_9PLAN2.700e-2853.40Nitrite reductase [NAD(P)H] n=1 Tax=Thalassoglobus... [more]
A0A6U3NRT0_9STRA4.620e-2854.81Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
UPI000412123A9.870e-2846.67nitrite reductase small subunit NirD n=1 Tax=Gaetb... [more]
A0A7R9W3I0_9STRA2.500e-2752.88Pyridine nucleotide-disulfide oxidoreductase domai... [more]
A0A4S1DRW3_9FLAO4.000e-2746.60Nitrite reductase small subunit NirD n=2 Tax=Flavo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012748Rieske-like [2Fe-2S] domain, NirD-typeTIGRFAMTIGR02378TIGR02378coord: 3..97
e-value: 3.6E-24
score: 82.9
IPR012748Rieske-like [2Fe-2S] domain, NirD-typePFAMPF13806Rieske_2coord: 3..96
e-value: 6.4E-18
score: 64.6
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 1..98
e-value: 3.5E-25
score: 90.1
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 2..98
NoneNo IPR availablePANTHERPTHR43809FAMILY NOT NAMEDcoord: 10..93
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 4..98
score: 17.093

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8867contigEcto-sp13_S_contig8867:4264..5362 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8867.20360.1mRNA_Ecto-sp13_S_contig8867.20360.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8867 4264..5362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8867.20360.1 ID=prot_Ecto-sp13_S_contig8867.20360.1|Name=mRNA_Ecto-sp13_S_contig8867.20360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
ASSWVRVGSVSDFPTNGGAAVLYGKSQLAEWYATQNVCPHKRALVLSEGI
VGSREGILKVACPLHKNNFDLKRCVPFSYANMRLLTFPVKVEDDGVFL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012748Rieske-like_NirD
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S