prot_Ecto-sp13_S_contig8864.20358.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8864.20358.1
Unique Nameprot_Ecto-sp13_S_contig8864.20358.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length161
Homology
BLAST of mRNA_Ecto-sp13_S_contig8864.20358.1 vs. uniprot
Match: D7G4W3_ECTSI (Acyl CoA Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W3_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 1.260e-87
Identity = 148/161 (91.93%), Postives = 150/161 (93.17%), Query Frame = 0
Query:    1 SHLSAGCTVGNDAMLGGYSKLRPGEHLPDGSVTMCDQQSAFQLRGTARNSPAQSDVHEDPRDAVKANLIDGACTVGACSLNILALVASFEATKLAASLWSKGDSFDTRVAVLSTVALAVWALASAVLLAVFKRVFVGDFRRMFPEGLRDEISAQVGLHTTD 161
            +HL AGCTVGNDAMLGGYSKLRPGEHLPDGSVTMCDQQSAFQLRG A  SP QSDVHEDP DAVKANLIDGACTVGACSLNILALVASFEATKLAASLWSKGDSFDTRVAVLSTVAL VWALASAVLLAVFK VFVGDF RM PEGLRDE+SAQVGL TTD
Sbjct: 1132 AHLGAGCTVGNDAMLGGYSKLRPGEHLPDGSVTMCDQQSAFQLRGAAHTSPTQSDVHEDPGDAVKANLIDGACTVGACSLNILALVASFEATKLAASLWSKGDSFDTRVAVLSTVALVVWALASAVLLAVFKWVFVGDFCRMLPEGLRDELSAQVGLRTTD 1292          
BLAST of mRNA_Ecto-sp13_S_contig8864.20358.1 vs. uniprot
Match: A0A6H5JSS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS7_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 2.420e-72
Identity = 128/160 (80.00%), Postives = 134/160 (83.75%), Query Frame = 0
Query:    1 SHLSAGCTVGNDAM-------------LGGYSKLRPGEHLPDGSVTMCDQQSAFQLRGTARNSPAQSDVHEDPRDAVKANLIDGACTVGACSLNILALVASFEATKLAASLWSKGDSFDTRVAVLSTVALAVWALASAVLLAVFKRVFVGDFRRMFPEGL 147
            +HLSAGCTVGNDAM             LGGY KLRP EHLPDGSVT CDQQ AFQLRGTAR SPAQSDVHED  DAV+A+LID ACTVGACSLNILALVASFEATKLAASLWS+GDSFDTRVAVLSTVAL VWALASA+LLAVFK VFVGDF RM PE +
Sbjct:  374 AHLSAGCTVGNDAMPAVCLLSTMFSVQLGGYFKLRPREHLPDGSVTTCDQQGAFQLRGTARTSPAQSDVHEDSGDAVRADLIDAACTVGACSLNILALVASFEATKLAASLWSRGDSFDTRVAVLSTVALVVWALASAMLLAVFKWVFVGDFCRMLPEDI 533          
BLAST of mRNA_Ecto-sp13_S_contig8864.20358.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 7.630e-68
Identity = 122/160 (76.25%), Postives = 135/160 (84.38%), Query Frame = 0
Query:    2 HLSAGCTVGNDAMLGGYSKLRPGEHLPDGSVTMCDQQSAFQLRGTARNSPAQSDVHEDPRDAVKANLIDGACTVGACSLNILALVASFEATKLAASLWSKGDSFDTRVAVLSTVALAVWALASAVLLAVFKRVFVGDFRRMFPEGLRDEISAQVGLHTTD 161
            H+ AGCTVGN AMLGGYSKLRPGEHL DGSVTMCDQQSAFQ  G+A  S  + D+H+DPR+ VKAN+ID ACT+GACSLNILALVASFEATKLAASLWS+GDS DTRV VLS VAL VWALASAVLLAVFK VFVG+FR M   G + EISA+VG  +TD
Sbjct: 1732 HIGAGCTVGNGAMLGGYSKLRPGEHLTDGSVTMCDQQSAFQFGGSAPTSVPR-DIHDDPRETVKANVIDAACTLGACSLNILALVASFEATKLAASLWSRGDSIDTRVVVLSAVALIVWALASAVLLAVFKWVFVGNFRLMSTAGTQREISARVGPRSTD 1890          
BLAST of mRNA_Ecto-sp13_S_contig8864.20358.1 vs. uniprot
Match: A0A6H5J509_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J509_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 9.310e-67
Identity = 124/170 (72.94%), Postives = 133/170 (78.24%), Query Frame = 0
Query:    2 HLSAGCTVGNDAMLGGYSKLRPGEHLPDGSVTMCDQQSAFQLRGTARNSPAQSDVH----------EDPRDAVKANLIDGACTVGACSLNILALVASFEATKLAASLWSKGDSFDTRVAVLSTVALAVWALASAVLLAVFKRVFVGDFRRMFPEGLRDEISAQVGLHTTD 161
            HL AGCTVGN AMLGGYSKLRPGE+L DGSVTMCDQQSAFQ   +A  S AQ D+H          EDPR+ VKAN+ID ACT+GACSLNILALVASFEATKLA SLWS+GD FDTRV VL  VAL VWALASAVLLAVFK VFVGDFR M   G R EISA+VG  +TD
Sbjct:  472 HLGAGCTVGNGAMLGGYSKLRPGENLTDGSVTMCDQQSAFQFGASAPTS-AQRDIHDDPLHMCFAAEDPRETVKANVIDAACTLGACSLNILALVASFEATKLAESLWSRGDPFDTRVVVLPAVALVVWALASAVLLAVFKWVFVGDFRLMSTPGTRKEISARVGPRSTD 640          
BLAST of mRNA_Ecto-sp13_S_contig8864.20358.1 vs. uniprot
Match: D7FH92_ECTSI (Putative peptide synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH92_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 1.170e-61
Identity = 116/161 (72.05%), Postives = 122/161 (75.78%), Query Frame = 0
Query:    1 SHLSAGCTVGNDAMLGGYSKLRPGEHLPDGSVTMCDQQSAFQLRGTARNSPAQSDVHEDPRDAVKANLIDGACTVGACSLNILALVASFEATKLAASLWSKGDSFDTRVAVLSTVALAVWALASAVLLAVFKRVFVGDFRRMFPEGLRDEISAQVGLHTTD 161
            +HL A          GGYS LRPGEHL DGSVTMCDQQSAF+  GT   SPA+ D H D  +AVK NLID ACT+GACSL  LALVASFEAT  AASLWSKGD FDTRV VLSTVAL VWALASAVLLAVFKRVFVGDFRR   EG R EISAQ+G  TTD
Sbjct:  692 AHLGAXXXXXXXXXXGGYSVLRPGEHLTDGSVTMCDQQSAFRPGGTTPTSPARRDGHNDAGEAVKENLIDAACTLGACSLITLALVASFEATTFAASLWSKGDGFDTRVVVLSTVALVVWALASAVLLAVFKRVFVGDFRRKPTEGQRKEISAQIGPRTTD 852          
BLAST of mRNA_Ecto-sp13_S_contig8864.20358.1 vs. uniprot
Match: A0A6H5JSY1_9PHAE (Carrier domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY1_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 8.650e-39
Identity = 94/161 (58.39%), Postives = 103/161 (63.98%), Query Frame = 0
Query:    1 SHLSAGCTVGNDAMLGGYSKLRPGEHLPDGSVTMCDQQSAFQLRGTARNSPAQSDVHEDPRDAVKANLIDGACTVGACSLNILALVASFEATKLAASLWSKGDSFDTRVAVLSTVALAVWALASAVLLAVFKRVFVGDFRRMFPEGLRDEISAQVGLHTTD 161
            +HL A  TVGN AM+    +   G +    S +  D   AF  R       A     ED  +AVK NLID ACT+GACSLN LALVASFE T   ASLWS GD FDTR+ VLSTVAL VWALASAVLLAVFKRV  GDFRR   EG R EISAQ+G  TTD
Sbjct: 1109 AHLGASSTVGNGAMI----RFGRGTNRKAASFSRPDD--AFLPRAPLFLCCAA----EDAGEAVKENLIDAACTLGACSLNTLALVASFETTTSLASLWSNGDGFDTRIVVLSTVALVVWALASAVLLAVFKRVLAGDFRRKPTEGQRKEISAQIGPRTTD 1259          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8864.20358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G4W3_ECTSI1.260e-8791.93Acyl CoA Synthase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JSS7_9PHAE2.420e-7280.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRT1_ECTSI7.630e-6876.25Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus ... [more]
A0A6H5J509_9PHAE9.310e-6772.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH92_ECTSI1.170e-6172.05Putative peptide synthetase n=1 Tax=Ectocarpus sil... [more]
A0A6H5JSY1_9PHAE8.650e-3958.39Carrier domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..108
NoneNo IPR availableTMHMMTMhelixcoord: 67..89
NoneNo IPR availableTMHMMTMhelixcoord: 109..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8864contigEcto-sp13_S_contig8864:3755..6438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8864.20358.1mRNA_Ecto-sp13_S_contig8864.20358.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8864 3755..6438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8864.20358.1 ID=prot_Ecto-sp13_S_contig8864.20358.1|Name=mRNA_Ecto-sp13_S_contig8864.20358.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp
SHLSAGCTVGNDAMLGGYSKLRPGEHLPDGSVTMCDQQSAFQLRGTARNS
PAQSDVHEDPRDAVKANLIDGACTVGACSLNILALVASFEATKLAASLWS
KGDSFDTRVAVLSTVALAVWALASAVLLAVFKRVFVGDFRRMFPEGLRDE
ISAQVGLHTTD
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