prot_Ecto-sp13_S_contig8835.20324.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8835.20324.1
Unique Nameprot_Ecto-sp13_S_contig8835.20324.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length190
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8835.20324.1 vs. uniprot
Match: D7G391_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G391_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 4.950e-81
Identity = 139/156 (89.10%), Postives = 143/156 (91.67%), Query Frame = 0 
Query:    1 MSSYSYVQHDPASRAGGVGDGGGDGVGGVRASQSTTEAEADPGLAVDAGRGTLPATSVDCAGGGDGKASGSPKANRAAPRDNGGDGDVQYVNFNGHGGRAGGVVALRRGDGVAAVEIEGDRSASTTGYSSSLKPLEAEQDEEEAKRKMDALLLRSR 156
            MSSYS+VQHDPASRAGGVG G GDG GGVRASQST  AEA PGLAVDAGRGTLPATSVD AGGG+ KA+GSPK NRAAPRDNGGDGDVQYVNFNGHGGRAGGVVALRRGDGVAAVEIEGDRS STTGYSS LKPL+AEQDEEEAKRKMDALLL  R
Sbjct:   79 MSSYSFVQHDPASRAGGVGGGDGDGAGGVRASQSTPAAEAGPGLAVDAGRGTLPATSVDFAGGGEEKANGSPKDNRAAPRDNGGDGDVQYVNFNGHGGRAGGVVALRRGDGVAAVEIEGDRSVSTTGYSSFLKPLQAEQDEEEAKRKMDALLLSGR 234
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BLAST of mRNA_Ecto-sp13_S_contig8835.20324.1 vs. uniprot
Match: A0A6H5JTZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ9_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 1.210e-78
Identity = 149/170 (87.65%), Postives = 154/170 (90.59%), Query Frame = 0 
Query:    1 MSSYSYVQHDPASRAGGVGDGGGDGVGGVRASQSTTEAEADPGLAVDAGRGTLPATSVDCAGGGDGKASGSPKANRAAPRDNGGDGDVQYVNFNGHGGRAGGVVALRRGDGVAAVEIEGDRSASTTGYSSSLKPLEAEQDEEEAKRKMDALLLRSRVHTHVNPVVPAAAG 170
            MSSYS+VQHDPASRAGGVG       GGVRASQSTT AE DPGLAVDAGRGTL ATSVD AGGGDGKA+GSPK NRAAPR NGGDGDVQYVNFNGH GRAGGVVALRRGDGVAAVEIEGDRS ++TGYSSSLKPL+AEQD EEAKRKMDALLLRSRVHTHVNPVVPAAAG
Sbjct: 1734 MSSYSFVQHDPASRAGGVGXXXXXXXGGVRASQSTTAAEEDPGLAVDAGRGTLMATSVDFAGGGDGKANGSPKTNRAAPRGNGGDGDVQYVNFNGHCGRAGGVVALRRGDGVAAVEIEGDRSVASTGYSSSLKPLQAEQDGEEAKRKMDALLLRSRVHTHVNPVVPAAAG 1903
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8835.20324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G391_ECTSI4.950e-8189.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTZ9_9PHAE1.210e-7887.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8835contigEcto-sp13_S_contig8835:2114..4719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8835.20324.1mRNA_Ecto-sp13_S_contig8835.20324.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8835 959..5465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8835.20324.1 ID=prot_Ecto-sp13_S_contig8835.20324.1|Name=mRNA_Ecto-sp13_S_contig8835.20324.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=190bp
MSSYSYVQHDPASRAGGVGDGGGDGVGGVRASQSTTEAEADPGLAVDAGR
GTLPATSVDCAGGGDGKASGSPKANRAAPRDNGGDGDVQYVNFNGHGGRA
GGVVALRRGDGVAAVEIEGDRSASTTGYSSSLKPLEAEQDEEEAKRKMDA
LLLRSRVHTHVNPVVPAAAGASGEGEEIGGGSGAVEGAE*
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