prot_Ecto-sp13_S_contig8789.20262.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8789.20262.1
Unique Nameprot_Ecto-sp13_S_contig8789.20262.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length330
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8789.20262.1 vs. uniprot
Match: D7FJE6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJE6_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 5.840e-112
Identity = 317/329 (96.35%), Postives = 318/329 (96.66%), Query Frame = 0 
Query:    1 MTLEEYEEMKRRKPAGKRDPAVTEETRKKISARLKAKWQDPSYRERRKHCMPNRKGVPHXXXXXXXXXXXXXXXXXXXXXXXKVTNMERSXXXXXXXXXXXXXXXXXXXXXXERLKNMAPRTXXXXXXXXXXXXXXXXXXEYKKRTSEAMRKAAHDRIIASGGVPKPPRVRXXXXXXXXXXXXXXXXRIEGVGISREAQRNLNRWAKQRKDAEVRLMRQAKKEEREREAATKLAIREAKAEAERIALEEEAALTEGLDDLEKVLMRSTIRAKKQERLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPDGFEMVEINGRMVLRMK 329
            MTLEEYEEMKRRKPAGKRDP VTEETRKKISARLKAKWQDPSYRERRK CMPNRKGVP XXXXXXXXXXXXXXXXXXXXXXXK+TNMER XXXXXXXXXXXXXXXXXXXX  ERLKNMAP  XXXXXXXXXXXXXXXXXX  KKRTSEAMRKAAHDRIIASGGVPKPPRVRXXXXXXXXXXXXXXXXRIEGVGISREAQRNLNRWAKQRKDAEVRLMRQAKKEEREREAATKLAIREAKAEAERIALEEEAALTEGLDDLEKVLMRSTIRAKKQERL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPDGFEMVEINGRMVLRMK
Sbjct:   89 MTLEEYEEMKRRKPAGKRDPTVTEETRKKISARLKAKWQDPSYRERRKQCMPNRKGVPXXXXXXXXXXXXXXXXXXXXXXXXKITNMERXXXXXXXXXXXXXXXXXXXXXRKERLKNMAPXXXXXXXXXXXXXXXXXXXXXXKKRTSEAMRKAAHDRIIASGGVPKPPRVRXXXXXXXXXXXXXXXXRIEGVGISREAQRNLNRWAKQRKDAEVRLMRQAKKEEREREAATKLAIREAKAEAERIALEEEAALTEGLDDLEKVLMRSTIRAKKQERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPDGFEMVEINGRMVLRMK 417
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8789.20262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJE6_ECTSI5.840e-11296.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 195..255
NoneNo IPR availableCOILSCoilCoilcoord: 270..297
NoneNo IPR availableSUPERFAMILY64496DNA-binding domain of intron-encoded endonucleasescoord: 22..81
IPR003611Nuclease associated modular domain 3SMARTSM00496seet_6coord: 15..34
e-value: 210.0
score: 6.1
coord: 55..71
e-value: 0.33
score: 20.0
coord: 85..101
e-value: 200.0
score: 6.3
IPR003611Nuclease associated modular domain 3PFAMPF07460NUMOD3coord: 56..97
e-value: 1.7E-5
score: 24.9
coord: 23..35
e-value: 0.99
score: 9.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8789contigEcto-sp13_S_contig8789:228..5860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8789.20262.1mRNA_Ecto-sp13_S_contig8789.20262.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8789 228..5863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8789.20262.1 ID=prot_Ecto-sp13_S_contig8789.20262.1|Name=mRNA_Ecto-sp13_S_contig8789.20262.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=330bp
MTLEEYEEMKRRKPAGKRDPAVTEETRKKISARLKAKWQDPSYRERRKHC
MPNRKGVPHTEETKARISAAVKNKWNDPVYREKVTNMERSEETRAKIGRI
IREQWANPVTREERLKNMAPRTEEHNQKIAASVRSKWLDPEYKKRTSEAM
RKAAHDRIIASGGVPKPPRVRRPRVPRAPGEPGSRASRIEGVGISREAQR
NLNRWAKQRKDAEVRLMRQAKKEEREREAATKLAIREAKAEAERIALEEE
AALTEGLDDLEKVLMRSTIRAKKQERLEKVAKAAAKAKAAAAAKEEQPAQ
PVEPEEPVEAVPDGFEMVEINGRMVLRMK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003611NUMOD3