prot_Ecto-sp13_S_contig8787.20261.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8787.20261.1
Unique Nameprot_Ecto-sp13_S_contig8787.20261.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length206
Homology
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 1.440e-134
Identity = 200/206 (97.09%), Postives = 202/206 (98.06%), Query Frame = 0
Query:    1 MYVKVFIISHLLAFSLSNSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYHATVSKFSYSIRKAITGAGGAVLHANFDLWTSKLSNEKYIGLRLFWCTSTFVLDSVLVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCALVEAFGTNASRAACKNLGARQVI 206
            MYVKVFIISHLLAFSLS+SQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELY ATVSKFSYSIRKAITGAGGAVLHANFDLWTSK SNEKYIGLRLFWCTSTFVLDS LVAVKLFQPSADLTSS+QLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNC LVEAFGTNASRAACKNLGARQVI
Sbjct:  172 MYVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYDATVSKFSYSIRKAITGAGGAVLHANFDLWTSKWSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSKQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNLGARQVI 377          
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 5.080e-45
Identity = 86/198 (43.43%), Postives = 120/198 (60.61%), Query Frame = 0
Query:    2 YVKVFIISHLLAFSLSNSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYHATVSKFSYSIRKAITGAGGAVLHANFDLWTSKLSNEKYIGLRLFWCTSTFVLDSVLVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCALVEAFGTNASRAACKN 199
            +VK  II      S    + VRA  ++     FP + ++ + +K  VVE+Y AT S+F   +   I G    +LH N DLW  K S+ KYIG+RLF+   T+VL S L+AV+ F P+ +L    +LS +L  +++ VL+E+GLD + LF   +DAGSDVKRLC  +L   WEWC  HM+NCALVEAFGT+ + A   N
Sbjct:   14 WVKCNIIQGFCPLSHGEKEWVRASLQLTALKNFPITGIHNKAVKQMVVEMYAATASQFKMEMAAQIGGM--RLLHLNLDLWVDKFSSLKYIGIRLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVNPAKSIN 209          
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Match: A0A2V3ILY8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY8_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 2.040e-43
Identity = 75/199 (37.69%), Postives = 119/199 (59.80%), Query Frame = 0
Query:    8 ISHLLAFSLSNSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYHATVSKFSYSIRKAITGAGGAVLHANFDLWTSKLSNEKYIGLRLFWCTSTFVLDSVLVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCALVEAFGTNASRAACKNLGARQVI 206
            +   L FS+ +  + R F  V  + +   + L P  I+  VV++Y  T S     +RK I+    A LH N +LWTS+LS +++ G++LF+ +  + + +VL+AV+ F PS +L     LSDIL +W  +++ EF +  + +  + +D GSDVKRLC  ++  +WEWC PHMLNC LV AFGT  +    +N GAR+++
Sbjct:   20 VKKFLPFSMVSFSEFRTFIGVLDQKSELNNQLQPGSIRKLVVKIYIGTTSSLMKKLRKEISVTPLAFLHINVNLWTSRLSKDRFFGIQLFYVSREWEVKAVLLAVRHFCPSGNLLPGRSLSDILQLWTNKIILEFNVSYDKILSSTSDTGSDVKRLCSVLIPESWEWCLPHMLNCVLVGAFGTGLNCVNIRNNGARRLL 218          
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 5.500e-43
Identity = 84/205 (40.98%), Postives = 124/205 (60.49%), Query Frame = 0
Query:    2 YVKVFIISHLLAFSLSNSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYHATVSKFSYSIRKAITGAGGAVLHANFDLWTSKLSNEKYIGLRLFWCTSTFVLDSVLVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCALVEAFGTNASRAACKNLGARQVI 206
            +VK  +I      S    + VRA  ++     FP + ++ + +K  VVE+Y AT S+F   +   I G    +LH + DLW  K S+ KY+G+ LF+   T+VL S L+AV+ F P+ +L    +LS ++   ++ VL+E+GLD + +F   +D+GSDVKRLC  +L   WEWC  HM+NCALVEAFGT+   A  +N GAR+VI
Sbjct:  167 WVKCNMIEGFCPVSHGEKEWVRASLKLTALKNFPITGIHNEAVKQMVVEMYAATASQFKMEMAAQIGGM--RLLHLSLDLWVDKFSSLKYVGIPLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDSAKSRNPGARKVI 369          
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 4.620e-37
Identity = 82/205 (40.00%), Postives = 114/205 (55.61%), Query Frame = 0
Query:    2 YVKVFIISHLLAFSLSNSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYHATVSKFSYSIRKAITGAGGAVLHANFDLWTSKLSNEKYIGLRLFWCTSTFVLDSVLVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCALVEAFGTNASRAACKNLGARQVI 206
            +VK  II      S    + VRA  ++     FP + ++ + +K  +                      G  +LH N DLW  K S+ KYIG+RLF+   T+VL S L+AV+ F P+ +L    +LS +L  +++ VL+E+GLD + LF   +DAGSDVKRLC  +L   WEWC  HM+NCALVEAFGT+   A   N GAR+VI
Sbjct:  112 WVKCNIIEGFCPLSHGEKEWVRASLKLTALKNFPITGIHNKAVKQMI---------------------GGMRLLHHNLDLWVDKFSSLKYIGIRLFYADRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDPAKSGNPGARKVI 295          
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 3.960e-26
Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 0
Query:   93 GLRLFWCTSTFVLDSVLVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCALVEAFGTNASRAACKNLGARQVI 206
            G+RL++   T+VL S L+AV+ F P+ +L    +LS +L  +++ VL E+GLD + LF   +DAGSDVKRLC  +L   WEWC  HM+NCA+V+AFG +   A  +N GAR+VI
Sbjct:    3 GIRLYYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSTLLQKYLERVLAEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMMNCAVVKAFGMHVDPAKSRNPGARKVI 116          
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Match: A0A6H5L6Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z1_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 3.940e-25
Identity = 69/210 (32.86%), Postives = 107/210 (50.95%), Query Frame = 0
Query:    2 YVKVFIISHLLAFSLSNSQDVRAFFEVCCEDTFPKSTLYPQ---MIKHFVVELYHATVSKFSYSIRKAITGAGGAVLHANFDLWTSKLSNEKYIGLRLFWCTSTFVLDSVLVAVKLFQPS--ADLTSSEQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCALVEAFGTNASRAACKNLGARQVI 206
            + K FII    AFSL++   VR      C D    + +  +    IK  +VE+Y AT   F+  + K +  A   +L+ N DLWTS++S EKYIG+R+ +     V+ S ++ VKLF+P     +   +    ++L W  +VL + GL   +    V+D+GSDV     K      EWC PHM+N   ++  G + S A+ KN   R ++
Sbjct:  211 FTKAFIIHAGCAFSLADHDRVRRCLATMCPDHLDVAAINARGATCIKKMIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYIGVRVCYMNENMVIKSFMLGVKLFRPKPGVGMDDGKITGRVVLKWNAQVLGQHGLRNENFAGAVSDSGSDVSTGIAKAFRR--EWCIPHMINRVTIDGTGMSNSPASSKNHLCRDLL 418          
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Match: A0A6H5KX27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX27_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 3.980e-25
Identity = 69/210 (32.86%), Postives = 107/210 (50.95%), Query Frame = 0
Query:    2 YVKVFIISHLLAFSLSNSQDVRAFFEVCCEDTFPKSTLYPQ---MIKHFVVELYHATVSKFSYSIRKAITGAGGAVLHANFDLWTSKLSNEKYIGLRLFWCTSTFVLDSVLVAVKLFQPS--ADLTSSEQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCALVEAFGTNASRAACKNLGARQVI 206
            + K FII    AFSL++   VR      C D    + +  +    IK  +VE+Y AT   F+  + K +  A   +L+ N DLWTS++S EKYIG+R+ +     V+ S ++ VKLF+P     +   +    ++L W  +VL + GL   +    V+D+GSDV     K      EWC PHM+N   ++  G + S A+ KN   R ++
Sbjct:  132 FTKAFIIHAGCAFSLADHDRVRRCLATMCPDHLDVAAINARGATCIKKMIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYIGVRVCYMNENMVIKSFMLGVKLFRPKPGVGMDDGKITGRVVLKWNAQVLGQHGLRNENFAGAVSDSGSDVSTGIAKAFRR--EWCIPHMINRVTIDGTGMSNSPASSKNHLCRDLL 339          
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Match: A0A2V3IPY4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPY4_9FLOR)

HSP 1 Score: 103 bits (257), Expect = 1.460e-22
Identity = 59/174 (33.91%), Postives = 89/174 (51.15%), Query Frame = 0
Query:   18 NSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYHATVSKFSYSIRKAITGAGGAVLHANFDLWTSKLSNEKYIGLRLFWCTSTFVLDSVLVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCALVEAFGTN 191
            N+Q    F     + +   S+L+  +IK  V+++Y AT S +                H N D WT  LS  K  G+R+      + L S  + V+ F     L  S +LS +L +   + L +F ++ N++  +V+D+GS VKRL  K+L   W WC  H+LNCALVEAFGT+
Sbjct:  156 NNQSSDYFVSCLDQKSEFNSSLHAGIIKRDVLDMYLATASLYKKQFLCVFQKTFLPEFHLNIDPWTLSLSRAKVFGVRIVVTDEQWCLQSKSLTVRHFDTCTTLLESGRLSGVLHLCYNKELMDFEVEPNNVMSSVSDSGSTVKRLGSKLLPGYWNWCMSHLLNCALVEAFGTS 329          
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Match: A0A0N7L827_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L827_PLAHL)

HSP 1 Score: 84.0 bits (206), Expect = 2.850e-15
Identity = 46/151 (30.46%), Postives = 77/151 (50.99%), Query Frame = 0
Query:    7 IISHLLAFSLSNSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYHATVSKFSYSIRKAITGAGGAVLHANFDLWTSKLSNEKYIGLRLFWCTSTFVLDSVLVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAG 157
            +I  LL      +  V+ F + C      K     + + H + ++YHAT   F   +RK        + H N DLWTSK S +KY+G+R+ +  + + +D  ++A+K F P +    S +LS++L  WV +VL EFG   + +  + +D G
Sbjct:   54 VIPKLLPLGFCENDKVQHFVK-CSGSPIGKHLPTRKRLHHLIFKVYHATKEGFRTDLRKIKASCPLPIFHLNVDLWTSKTSKDKYVGIRIIFVDAQWRMDISILAIKRFCPGSAKYKSFRLSEVLHSWVIDVLAEFGFLPSDIAGSTSDGG 203          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8787.20261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KVU5_9PHAE1.440e-13497.09Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KEC8_9PHAE5.080e-4543.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V3ILY8_9FLOR2.040e-4337.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6H5KWS6_9PHAE5.500e-4340.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ82_9PHAE4.620e-3740.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JNY1_9PHAE3.960e-2648.25Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L6Z1_9PHAE3.940e-2532.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX27_9PHAE3.980e-2532.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V3IPY4_9FLOR1.460e-2233.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A0N7L827_PLAHL2.850e-1530.46Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.552
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 72..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8787contigEcto-sp13_S_contig8787:2314..4289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8787.20261.1mRNA_Ecto-sp13_S_contig8787.20261.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8787 2314..4289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8787.20261.1 ID=prot_Ecto-sp13_S_contig8787.20261.1|Name=mRNA_Ecto-sp13_S_contig8787.20261.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp
MYVKVFIISHLLAFSLSNSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVE
LYHATVSKFSYSIRKAITGAGGAVLHANFDLWTSKLSNEKYIGLRLFWCT
STFVLDSVLVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHLF
CTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCALVEAFGTNASRAACKNL
GARQVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf