prot_Ecto-sp13_S_contig8786.20259.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8786.20259.1
Unique Nameprot_Ecto-sp13_S_contig8786.20259.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length352
Homology
BLAST of mRNA_Ecto-sp13_S_contig8786.20259.1 vs. uniprot
Match: D7FX46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX46_ECTSI)

HSP 1 Score: 459 bits (1182), Expect = 3.920e-160
Identity = 276/308 (89.61%), Postives = 286/308 (92.86%), Query Frame = 0
Query:   52 MVQARPYAERVAEFRPFACSDFIIPMLTRLCPPGEKMDRWLGNAKVPVAVTMHDFMQAVKEVCPDVPAECPAMVVFLIQIGRLAESLDDRCRREKLNKPNAGRPSVDLDEALGVAMPVWSAEEEYLIMKVTLNAIDVLRRWMRRPRRRKAAGETLPPTRQPEPNRAAKVKTARKTKRPTLTSTNNKETTKAARLAAMSEAPPSIDSSSRTSNSKAPRRGSTRNMQGSASSPSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------NEEGQHESPRARQRLEQAKVLDKQVEARREEGGGG 350
            MVQARPYAERVAEFRPFACSDFIIPM T+LCPPGEKMDRWLGNAKVPVAVTMHDFMQAVKEVCPDVPAECPAMVVFLIQIGRLAESLDD+CRREKLNKPNAGRPSVDLDEAL VAMPVWSAEEEYLIMKVTLNAID+LRRWMRRPRRR+AAGETLPPT+QPEPN+AA+ KTARKTKRPTLTS+NNKET KAARLAA SEAPPSID+S RTSNSKAPRRGSTR M+GSASSPSVT     XXXXXXXXXXXXXXXXXXXXXXXXX         NEEGQHESPRARQRLEQAKVLDKQVEA REEGGGG
Sbjct:    1 MVQARPYAERVAEFRPFACSDFIIPMFTKLCPPGEKMDRWLGNAKVPVAVTMHDFMQAVKEVCPDVPAECPAMVVFLIQIGRLAESLDDQCRREKLNKPNAGRPSVDLDEALRVAMPVWSAEEEYLIMKVTLNAIDILRRWMRRPRRRRAAGETLPPTQQPEPNQAARAKTARKTKRPTLTSSNNKETAKAARLAATSEAPPSIDNS-RTSNSKAPRRGSTRKMRGSASSPSVTAPNPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEGQHESPRARQRLEQAKVLDKQVEASREEGGGG 307          
BLAST of mRNA_Ecto-sp13_S_contig8786.20259.1 vs. uniprot
Match: A0A6H5KDS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS0_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 1.580e-101
Identity = 213/313 (68.05%), Postives = 228/313 (72.84%), Query Frame = 0
Query:   38 PRIAAFAELIGVPIMVQARPYAERVAEFRPFACSDFIIPMLTRLCPPGEKMDRWLGNAKVPVAVTMHDFMQAVKEVCPDVPAECPAMVVFLIQIGRLAESLDDRCRREKLNKPNAGRPSVDLDEALGVAMPVWSAEEEYLIMKVTLNAIDVLRRWMRRPRRRKAAGETLPPTRQPEPNRAAKVKTARKTKRPTLTSTNNKETTKAARLAAMSEAPPSIDSSSRTSNSKAPRRGSTRNMQGSASSPSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEGQHESPRARQRLEQAKVLDKQVEARREEGGGG 350
            PR  AFAELIGVPIMVQARPY ERV EFRPFACSDFIIP+LT+LCPPGEKMD       +P +++   ++Q    +CPDVPAECPAMV+FLIQIGRLAESLDDRCRREKLNKPNAGRPSVDLDEAL +AMPVWSAEEEYLIMKVTLNAIDVLRRWMRRPRRR+AAGETLPPT+QPEPN+AAKVKTARKTKR TLT                                                     XXXXXXX   XXXXXXXXXXXXXXXX    NE  QHES RARQRLEQAKVLDK+VEA REEGGGG
Sbjct:   32 PREQAFAELIGVPIMVQARPYVERVVEFRPFACSDFIIPVLTKLCPPGEKMD------SLP-SISSSVWLQ----ICPDVPAECPAMVMFLIQIGRLAESLDDRCRREKLNKPNAGRPSVDLDEALRIAMPVWSAEEEYLIMKVTLNAIDVLRRWMRRPRRRRAAGETLPPTQQPEPNQAAKVKTARKTKRSTLTXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNPXXXXXXXXXXXXXXXXTAAANEGEQHESTRARQRLEQAKVLDKKVEASREEGGGG 327          
BLAST of mRNA_Ecto-sp13_S_contig8786.20259.1 vs. uniprot
Match: A0A6H5K7X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X3_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 4.820e-14
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    1 MDRFVLQFHVRQFGTKKLARRNLRQLCKSIAKLAPTNPRIAA 42
            MDRFVLQFHVRQFGTKKLARRNL QLCKSIAKLAPTNPRIAA
Sbjct:  560 MDRFVLQFHVRQFGTKKLARRNLHQLCKSIAKLAPTNPRIAA 601          
BLAST of mRNA_Ecto-sp13_S_contig8786.20259.1 vs. uniprot
Match: D7FX47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX47_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.310e-13
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0
Query:    1 MDRFVLQFHVRQFGTKKLARRNLRQLCKSIAKLAPTNPRIAA 42
            MDRFVLQFHVRQFGTKKLARRNL QLCKSI KLAPTNPRIAA
Sbjct:  446 MDRFVLQFHVRQFGTKKLARRNLHQLCKSITKLAPTNPRIAA 487          
BLAST of mRNA_Ecto-sp13_S_contig8786.20259.1 vs. uniprot
Match: D7FNA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA3_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 6.710e-8
Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   23 LRQLCKSI-AKLAPTNPRIAAFAELIGVPIMVQARPYAERVAEFRPFACSDFIIPMLTRLCPPGEKMDRWLGNAKVPVA 100
            LR L  S+ +K    +PR+  FA+L G+P+        E   +FRPFA +D+ +P++  L PPGE +D W+G  K PV+
Sbjct:    2 LRTLLLSLDSKEGLAHPRVTLFAKLSGIPVST------EDSRDFRPFALTDYFLPIVRLLVPPGEDLDLWMGTGKEPVS 74          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8786.20259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FX46_ECTSI3.920e-16089.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDS0_9PHAE1.580e-10168.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7X3_9PHAE4.820e-1497.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX47_ECTSI1.310e-1395.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FNA3_ECTSI6.710e-839.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8786contigEcto-sp13_S_contig8786:656..4927 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8786.20259.1mRNA_Ecto-sp13_S_contig8786.20259.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8786 644..4933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8786.20259.1 ID=prot_Ecto-sp13_S_contig8786.20259.1|Name=mRNA_Ecto-sp13_S_contig8786.20259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=352bp
MDRFVLQFHVRQFGTKKLARRNLRQLCKSIAKLAPTNPRIAAFAELIGVP
IMVQARPYAERVAEFRPFACSDFIIPMLTRLCPPGEKMDRWLGNAKVPVA
VTMHDFMQAVKEVCPDVPAECPAMVVFLIQIGRLAESLDDRCRREKLNKP
NAGRPSVDLDEALGVAMPVWSAEEEYLIMKVTLNAIDVLRRWMRRPRRRK
AAGETLPPTRQPEPNRAAKVKTARKTKRPTLTSTNNKETTKAARLAAMSE
APPSIDSSSRTSNSKAPRRGSTRNMQGSASSPSVTAANPAAAAAAAAAAV
GGGAKEDNEAAEAAANEEGQHESPRARQRLEQAKVLDKQVEARREEGGGG
A*
back to top