prot_Ecto-sp13_S_contig8745.20216.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8745.20216.1
Unique Nameprot_Ecto-sp13_S_contig8745.20216.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length477
Homology
BLAST of mRNA_Ecto-sp13_S_contig8745.20216.1 vs. uniprot
Match: D8LFL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFL8_ECTSI)

HSP 1 Score: 838 bits (2164), Expect = 3.840e-293
Identity = 432/478 (90.38%), Postives = 441/478 (92.26%), Query Frame = 0
Query:    1 QPGEPTELVLLSPVSDSDSGPVITADAGSSLPAFSLGAMDACGNRTAPPHNEAWQVSLEITAASAGDAGEVGPEFAGPVREKVAAGAASFNDSVVKWHRPLKSDGELAVVDATLWVGTTGKDTKQVASTSFTVRVMPSKVPFRAVVCLDGNAWPDPEEAEHAPEAGTGAAKAADAVGVRRAYIAGGEISGLHLRLYDQGGSELVVNKDTFDASNKEAVTCSWDAAWRWPLKTAEKGVGYDVLPDLKVPTQLSRLENGIHHAKVVVTPRTVGGWPLTPLPATFAFAVQAGPVARWMAVKPSAGGKITDNITPLELTSGGDAKACHESFKAVVQGFVPVDSYGNLVKNVPRAPEIRIEGMPLTNLLPEHQCKLMKPSKANGHYHFPRSLNLEGPPGQSGHILIMGSSSEDSANGGGPARGGDQGDGAAAGG-VVDETRVLRLPVSIRAGPPVQLLIRSPALGVEQFTREIRATQLSGFTV 477
            +PG+PTELVLLSP SDSDSGPVITADAGSSLP FSLGAMDACGNRTAPPHNEAWQV+LEITAASAGDAGEVGPEFAGPVREKVAAGAASFNDSVVKWHRPLKSDGELAVVDATLWV T+GKD KQVASTSFTVRVMPSKVPFRAVVCLDGNAWPDPEEAEHAP AGTGAAKAADAVGVRRAYIAGGEISGLHLRLYDQGGSELVV +DTFDASNKEAVTCSWDAAWRWP KT E G+GYDVLPDLKVPTQLSRLENGIHHAKVVVTPR VGGWPLTPLPATFAFAVQAGPV+RWMAVKPSAGGKITDNITPLELTSG DAKACHES KAVVQGFVPVDSYGNLVKNVPRAPEIRIEGMP TNLLPEHQCKLMKPSKANGHYHFPRSLNLEGPPGQ+GHILIMGSSSED                      VVDETRVLRLPVSIRAGPPVQLLIRSP LG+ QFTREIRATQLSGFTV
Sbjct:  339 EPGKPTELVLLSPASDSDSGPVITADAGSSLPPFSLGAMDACGNRTAPPHNEAWQVTLEITAASAGDAGEVGPEFAGPVREKVAAGAASFNDSVVKWHRPLKSDGELAVVDATLWVDTSGKDRKQVASTSFTVRVMPSKVPFRAVVCLDGNAWPDPEEAEHAPAAGTGAAKAADAVGVRRAYIAGGEISGLHLRLYDQGGSELVVGEDTFDASNKEAVTCSWDAAWRWPPKTIENGLGYDVLPDLKVPTQLSRLENGIHHAKVVVTPRAVGGWPLTPLPATFAFAVQAGPVSRWMAVKPSAGGKITDNITPLELTSGDDAKACHESLKAVVQGFVPVDSYGNLVKNVPRAPEIRIEGMPFTNLLPEHQCKLMKPSKANGHYHFPRSLNLEGPPGQNGHILIMGSSSEDXXXXXXXXXXXXXXXXXXXXXXVVDETRVLRLPVSIRAGPPVQLLIRSPELGIGQFTREIRATQLSGFTV 816          
BLAST of mRNA_Ecto-sp13_S_contig8745.20216.1 vs. uniprot
Match: A0A6H5JXR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR4_9PHAE)

HSP 1 Score: 837 bits (2163), Expect = 2.350e-281
Identity = 432/477 (90.57%), Postives = 440/477 (92.24%), Query Frame = 0
Query:    1 QPGEPTELVLLSPVSDSDSGPVITADAGSSLPAFSLGAMDACGNRTAPPHNEAWQVSLEITAASAGDAGEVGPEFAGPVREKVAAGAASFNDSVVKWHRPLKSDGELAVVDATLWVGTTGKDTKQVASTSFTVRVMPSKVPFRAVVCLDGNAWPDPEEAEHAPEAGTGAAKAADAVGVRRAYIAGGEISGLHLRLYDQGGSELVVNKDTFDASNKEAVTCSWDAAWRWPLKTAEKGVGYDVLPDLKVPTQLSRLENGIHHAKVVVTPRTVGGWPLTPLPATFAFAVQAGPVARWMAVKPSAGGKITDNITPLELTSGGDAKACHESFKAVVQGFVPVDSYGNLVKNVPRAPEIRIEGMPLTNLLPEHQCKLMKPSKANGHYHFPRSLNLEGPPGQSGHILIMGSSSEDSANGGGPARGGDQGDGAAAGGVVDETRVLRLPVSIRAGPPVQLLIRSPALGVEQFTREIRATQLSGFTV 477
            +PG+PTELVLLSP SDSDSGPV+TADAGSSLPAFSLGAMDACGNRTAPPHNEAWQVSLEITAASAGDAGEVGPEFAGP R+ VAAGAASFNDSVVKWHRPLKSDGELAVVDATL VGT+GKD KQVASTSFTVRVMPSKVPFRAVVCLDG AWPDPEEAEHAP AGTGAAKAADAVGVRRAY AGGEISGLHLRLYDQGGSELVV KDTFDASNKEAVTCSWDAAWRWP KTAE G+GYDVLPDLKVPTQLSRLENGIHHAKVVVTPR VGGWPLTPLPATFAFAVQAGPVARWMAVKPSAGG ITDNITPLELTSGGDAKACHE+ KAVV+GFVPVDSYGNLVKNVPRAPEIRIEGMPLTNLLPEHQCKLMKPSK NGHYHFPRSLNLEGPPGQSGHILIMGSSSE S                    VVDETRVLRLPVSIRAGPPVQLLIRSP LGVEQFTREIRATQLSGFTV
Sbjct:  982 EPGKPTELVLLSPASDSDSGPVMTADAGSSLPAFSLGAMDACGNRTAPPHNEAWQVSLEITAASAGDAGEVGPEFAGPARQSVAAGAASFNDSVVKWHRPLKSDGELAVVDATLLVGTSGKDMKQVASTSFTVRVMPSKVPFRAVVCLDGTAWPDPEEAEHAPAAGTGAAKAADAVGVRRAYAAGGEISGLHLRLYDQGGSELVVGKDTFDASNKEAVTCSWDAAWRWPPKTAEMGLGYDVLPDLKVPTQLSRLENGIHHAKVVVTPRAVGGWPLTPLPATFAFAVQAGPVARWMAVKPSAGGNITDNITPLELTSGGDAKACHEALKAVVKGFVPVDSYGNLVKNVPRAPEIRIEGMPLTNLLPEHQCKLMKPSKVNGHYHFPRSLNLEGPPGQSGHILIMGSSSEGSXXXXXXXXXXXX-----XXXVVDETRVLRLPVSIRAGPPVQLLIRSPELGVEQFTREIRATQLSGFTV 1453          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8745.20216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFL8_ECTSI3.840e-29390.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXR4_9PHAE2.350e-28190.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8745contigEcto-sp13_S_contig8745:263..5690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8745.20216.1mRNA_Ecto-sp13_S_contig8745.20216.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8745 263..5690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8745.20216.1 ID=prot_Ecto-sp13_S_contig8745.20216.1|Name=mRNA_Ecto-sp13_S_contig8745.20216.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=477bp
QPGEPTELVLLSPVSDSDSGPVITADAGSSLPAFSLGAMDACGNRTAPPH
NEAWQVSLEITAASAGDAGEVGPEFAGPVREKVAAGAASFNDSVVKWHRP
LKSDGELAVVDATLWVGTTGKDTKQVASTSFTVRVMPSKVPFRAVVCLDG
NAWPDPEEAEHAPEAGTGAAKAADAVGVRRAYIAGGEISGLHLRLYDQGG
SELVVNKDTFDASNKEAVTCSWDAAWRWPLKTAEKGVGYDVLPDLKVPTQ
LSRLENGIHHAKVVVTPRTVGGWPLTPLPATFAFAVQAGPVARWMAVKPS
AGGKITDNITPLELTSGGDAKACHESFKAVVQGFVPVDSYGNLVKNVPRA
PEIRIEGMPLTNLLPEHQCKLMKPSKANGHYHFPRSLNLEGPPGQSGHIL
IMGSSSEDSANGGGPARGGDQGDGAAAGGVVDETRVLRLPVSIRAGPPVQ
LLIRSPALGVEQFTREIRATQLSGFTV
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