prot_Ecto-sp13_S_contig8724.20192.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8724.20192.1
Unique Nameprot_Ecto-sp13_S_contig8724.20192.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8724.20192.1 vs. uniprot
Match: D7G047_ECTSI (Topo_C_assoc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G047_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 2.210e-16
Identity = 79/90 (87.78%), Postives = 81/90 (90.00%), Query Frame = 0 
Query:    1 MNVPPDWNFSYETLYNSKQSLLDVPRPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGSACASAASPKNPEVKGKGKAKNVED 90
            MNVPPDWNFSYETLYNSKQS+LDVPRPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        ASPKNPEVKGKGKAK VE+
Sbjct:   33 MNVPPDWNFSYETLYNSKQSVLDVPRPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXASPKNPEVKGKGKAKKVEE 120
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BLAST of mRNA_Ecto-sp13_S_contig8724.20192.1 vs. uniprot
Match: D7G042_ECTSI (TOPEUc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G042_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.260e-14
Identity = 45/89 (50.56%), Postives = 46/89 (51.69%), Query Frame = 0 
Query:    1 MNVPPDWNFSYETLYNSKQSLLDVPRPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGSACASAASPKNPEVKGKGKAKNVE 89
            MNVPPDWNFSYETLYNSKQS+LDVPRPPG                                          ASPKNPEVKGKGKAK VE
Sbjct:  951 MNVPPDWNFSYETLYNSKQSVLDVPRPPG-----------------------------------------GASPKNPEVKGKGKAKKVE 998
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BLAST of mRNA_Ecto-sp13_S_contig8724.20192.1 vs. uniprot
Match: A0A6H5K298_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K298_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 7.730e-12
Identity = 74/89 (83.15%), Postives = 75/89 (84.27%), Query Frame = 0 
Query:    1 MNVPPDWNFSYETLYNSKQSLLDVPRPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGSACASAASPKNPEVKGKGKAKNVE 89
            MNVPPDWNFSYETLYNSKQS+LDVPRPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             PEVKGKGKAK VE
Sbjct:  104 MNVPPDWNFSYETLYNSKQSVLDVPRPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEVKGKGKAKQVE 192
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8724.20192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G047_ECTSI2.210e-1687.78Topo_C_assoc domain-containing protein n=1 Tax=Ect... [more]
D7G042_ECTSI1.260e-1450.56TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5K298_9PHAE7.730e-1283.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8724contigEcto-sp13_S_contig8724:4979..5248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8724.20192.1mRNA_Ecto-sp13_S_contig8724.20192.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8724 4979..5911 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8724.20192.1 ID=prot_Ecto-sp13_S_contig8724.20192.1|Name=mRNA_Ecto-sp13_S_contig8724.20192.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
MNVPPDWNFSYETLYNSKQSLLDVPRPPGGGKKKADAAAATTTAKTPPKT
AAAAAAAKKPAAAEGSACASAASPKNPEVKGKGKAKNVED
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