prot_Ecto-sp13_S_contig8708.20174.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8708.20174.1
Unique Nameprot_Ecto-sp13_S_contig8708.20174.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length713
Homology
BLAST of mRNA_Ecto-sp13_S_contig8708.20174.1 vs. uniprot
Match: D8LJE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE2_ECTSI)

HSP 1 Score: 1035 bits (2676), Expect = 0.000e+0
Identity = 629/728 (86.40%), Postives = 644/728 (88.46%), Query Frame = 0
Query:    2 QVACLSIDRRGELLVTGDESGAICARLLHHSGDRSGDGAAYRSSSVEGXXXXXXXXXX-VVEVLREAHSGEVLAISHVEGGSGDDDPALFVSGGKAGGVVRLWKAACLERSRETAAXXXXXGDLEVQVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEPLDRRDREAEDDRPTVD-----YGDRGGHGGSAESGRERPDDAVGRTELGAVLMKFEHTSEPIEGVCCSQEQELIAATDAAGIVRTYRPLLPRGGSTDNNPSXXXXXXXXXXAEARRFELVVECRLGARPVSCEFGSGPRGVVSGGERR-GAGGEGEVLRTCTTRGVLRLWPTASLPTRPIRSPPQSAPTRFPDDHEALAPLPHPSNAGTNSGSGXXXXXXXXXXXXXXXXXXXXXXX-----QENRDPSDPFSRWTAIDAEGRDSGKVGVGGGERGEEEEPTARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSXXXXXXXXXXXXXXXXXXXXXXXXXH---EEVEAPRXXXXAPTPMRASGATGPSRRLRQTWGTSTSSTRDSRARPGCSMGASDDV-FVAPSRMQEPSLWSTAAEQAELERRMTEASMSTEFDGSAVPEPAAPAYRSAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPMRKGKQVSKSHLSKVQEQRITEEDLEFDGMEPDCSAIMGFGSSTAGRMWPHEELEWYGGRKMFAELDRS 713
            +V CLSIDRRGELLVTGDESGAICARLLHHSG+RSGDG A  SSSVEGXXXXXXXXXX V EV+REAHSGEVLAISHVEGG+GDDDPALFVSGGK GGVVRLWKAACLERSRET A     GDLEV VELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEP DRRDREAEDDRPTV      YGDRG  GGS  SGRERPD+AVGRTELGAVLMKFEHTSEP+E VCCSQEQELIAATDAAGIVRTYRPLLPRGGSTDNNPS          AEARRFELVVECRLGARPVSCEFGSGPRGV SGG+RR G GGEGEVLRTCT RGVLRLWPTASLPTRP+R PP SAPTR PD HEALAPLPHPSNAGT+    XXXXXXXXXXXXXXXXXXXXX       QENRDPSDPFSRWTAIDA+GR  G VGVGGGE GEEEEP+ARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSXXXXXXXXXXXXXXXXXXXXXXXXX    +E+ APRXXXXAPTPMRASGATGP RRLRQTWGTS SS R SRAR G S  ASDD  FVAPSRMQEPSLWSTAAEQAELERRMTE     EFDGS VPEP AP YR+AAAAAVNIHPLAKTFEGLVPVSLDAPPPRP RKGKQVSKSHLSKVQEQRITEEDL FDGMEPDCSAI+GFGSSTAGRMWPHEELEWYGGRKMFAELDRS
Sbjct:   16 KVGCLSIDRRGELLVTGDESGAICARLLHHSGNRSGDGTACGSSSVEGXXXXXXXXXXXVAEVVREAHSGEVLAISHVEGGAGDDDPALFVSGGK-GGVVRLWKAACLERSRETVAAGGGGGDLEVHVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEPSDRRDREAEDDRPTVGRPTVGYGDRGSRGGSVASGRERPDNAVGRTELGAVLMKFEHTSEPVERVCCSQEQELIAATDAAGIVRTYRPLLPRGGSTDNNPSDGAPPTAAAAAEARRFELVVECRLGARPVSCEFGSGPRGVESGGDRRRGVGGEGEVLRTCTARGVLRLWPTASLPTRPMRPPPSSAPTRLPDYHEALAPLPHPSNAGTDXXXXXXXXXXXXXXXXXXXXXXXXXAMAAGTEQENRDPSDPFSRWTAIDAKGRGPGLVGVGGGEGGEEEEPSARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELGAPRXXXXAPTPMRASGATGPPRRLRQTWGTSASSPRGSRARRGSSTDASDDASFVAPSRMQEPSLWSTAAEQAELERRMTE-----EFDGSGVPEPVAPVYRAAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPKRKGKQVSKSHLSKVQEQRITEEDLAFDGMEPDCSAIIGFGSSTAGRMWPHEELEWYGGRKMFAELDRS 737          
BLAST of mRNA_Ecto-sp13_S_contig8708.20174.1 vs. uniprot
Match: A0A6H5L2I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2I0_9PHAE)

HSP 1 Score: 976 bits (2523), Expect = 0.000e+0
Identity = 591/711 (83.12%), Postives = 600/711 (84.39%), Query Frame = 0
Query:    3 VACLSIDRRGELLVTGDESGAICARLLHHSGDRSGDGAAYRSSSVEGXXXXXXXXXXVVEVLREAHSGEVLAISHVEGGSGDDDPALFVSGGKAGGVVRLWKAACLERSRETAAXXXXXGDLEVQVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEPLDRRDREAEDDRPTVDYGDRGGHGGSAESGRERPDDAVGRTELGAVLMKFEHTSEPIEGVCCSQEQELIAATDAAGIVRTYRPLLPRGGSTDNNPSXXXXXXXXXXAEARRFELVVECRLGARPVSCEFGSGPRGVVSGGERRGAGGEGEVLRTCTTRGVLRLWPTASLPTRPIRSPPQSAPTRFPDDHEALAPLPHPSNAGTNSGSGXXXXXXXXXXXXXXXXXXXXXXXQENRDPSDPFSRWTAIDAEGRDSGKVGVGGGERGEEEEPTARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSXXXXXXXXXXXXXXXXXXXXXXXXXHEEVEAPRXXXXAPTPMRASGATGPSRRLRQTWGTSTSSTRDSRARPGCSMGASDDVFVAPSRMQEPSLWSTAAEQAELERRMTEASMSTEFDGSAVPEPAAPAYRSAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPMRKGKQVSKSHLSKVQEQRITEEDLEFDGMEPDCSAIMGFGSSTAGRMWPHEELEWYGGRKMFAELDRS 713
            V CLSIDRRGELLVTGDESGAICARLLHHSG+RSGDG AY SSS EG   XXXXXXXV EVLREAHSGEVLAISHVEGG+GDDDPALFVSGGK GGVVRLWKAACLERSRETAA     GDLEVQVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEP DRRD EAEDDRP V YGDRGG GGSA SGRE PDDAVGRTELGAVLMKFEHTSEPIEGVCCSQEQELIAATDAAGIVRTYRPLLPR  STDNNP           AEARRFELVVECRLGARPV                    GGEGEVLRTCT RG+LRLW TASLPTRP+R P  SAPTR PDDHEALAPLPH SNAGT+S   XXXXXXXXXXXXXXXXXXX    QENRDPSDPFSR TAIDA G  SG VGVGGGERGEE E TARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGS   XXXXXXXXXXXXXXXXXXXXXX        XXXX    MRASGA G   RLRQTWGTSTSS R +RAR GCSM ASDD FVAPSRMQEPSLWSTAAEQ ELERRMTEA+   EFDG AVPEPAAP YR+AAAAAVNIHPLAKTFEGLVPVSLDAPPPRPMRKGKQVSK HLSKVQEQRITEEDL FDGMEPDCS IMGFGSST GRMWP+EELEWYGGRKM AELD S
Sbjct:    5 VGCLSIDRRGELLVTGDESGAICARLLHHSGNRSGDGTAYGSSSFEGGPSXXXXXXXVAEVLREAHSGEVLAISHVEGGAGDDDPALFVSGGK-GGVVRLWKAACLERSRETAAAGGSGGDLEVQVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEPSDRRDGEAEDDRPAVGYGDRGGRGGSAASGREPPDDAVGRTELGAVLMKFEHTSEPIEGVCCSQEQELIAATDAAGIVRTYRPLLPRRVSTDNNPGDGAPPTTAAAAEARRFELVVECRLGARPVXXXXXXXXXXXXXXXXXXXVGGEGEVLRTCTARGILRLWLTASLPTRPMRPPXXSAPTRLPDDHEALAPLPHTSNAGTDSSXXXXXXXXXXXXXXXXXXXXXVGAEQENRDPSDPFSRSTAIDATGSGSGVVGVGGGERGEEVELTARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MRASGANGTPGRLRQTWGTSTSSPRSNRARRGCSMDASDDAFVAPSRMQEPSLWSTAAEQVELERRMTEATH--EFDGGAVPEPAAPTYRAAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPMRKGKQVSKRHLSKVQEQRITEEDLAFDGMEPDCSVIMGFGSSTVGRMWPYEELEWYGGRKMSAELDHS 710          
BLAST of mRNA_Ecto-sp13_S_contig8708.20174.1 vs. uniprot
Match: A0A836CAG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG1_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.010e-20
Identity = 84/265 (31.70%), Postives = 118/265 (44.53%), Query Frame = 0
Query:   88 ALFVSGGKAGGVVRLWKAACLERSRETAAXXXXXGDLEVQVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEPLDRRDREAEDDRPTVDYGDRGGHGGSA--ESGRERPDDAVGRTELGA--VLMKFEHTSEPIEGVCCSQEQELIAATDAAGIVRTYRPLLPRGGSTDNNPSXXXXXXXXXXAEARRFELVVECRLGARPVSCEFGSGPRGVVSGGERRGAGGEGEVLRTCTTRGVLRLWPTASLPTRP 348
            A FV+GG + GVVR+W     E               E+++  L+++  GG QV+ LAA+      +V+AG+ EGTVFAF          R D               GG G +A  + G   P D    T +    ++   EHT++PI G+ CS EQ+L  A DA G VR YRP        +              A A R+  + E +LG+    CEFG              A  +GE L  C+  G++R+WPTA+LP  P
Sbjct:  196 ARFVTGG-SDGVVRMWGVQVGESG-------------ELKLAPLRELQAGGCQVTALAANAR----MVVAGSLEGTVFAF----------RAD---------------GGRGAAAAPDDGSSAPPDQEVETVVDGQPLIFMLEHTTQPIVGIACSSEQQLTVAADATGAVRLYRPQ-----PDERRGQLRQLRTPAERAAALRWRTIAEMQLGSAAAGCEFG--------------AASQGERLAACSAEGLVRIWPTAALPLEP 398          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8708.20174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJE2_ECTSI0.000e+086.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2I0_9PHAE0.000e+083.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAG1_9STRA2.010e-2031.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8708contigEcto-sp13_S_contig8708:1..6049 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8708.20174.1mRNA_Ecto-sp13_S_contig8708.20174.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8708 1..6049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8708.20174.1 ID=prot_Ecto-sp13_S_contig8708.20174.1|Name=mRNA_Ecto-sp13_S_contig8708.20174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=713bp
SQVACLSIDRRGELLVTGDESGAICARLLHHSGDRSGDGAAYRSSSVEGG
SNGGGGGGGVVEVLREAHSGEVLAISHVEGGSGDDDPALFVSGGKAGGVV
RLWKAACLERSRETAAAGGGGGDLEVQVELLKDMLVGGFQVSCLAASLSP
TVPIVLAGTAEGTVFAFHLLQAQEPLDRRDREAEDDRPTVDYGDRGGHGG
SAESGRERPDDAVGRTELGAVLMKFEHTSEPIEGVCCSQEQELIAATDAA
GIVRTYRPLLPRGGSTDNNPSDGGPPTAAAAAEARRFELVVECRLGARPV
SCEFGSGPRGVVSGGERRGAGGEGEVLRTCTTRGVLRLWPTASLPTRPIR
SPPQSAPTRFPDDHEALAPLPHPSNAGTNSGSGGSGGGDKNPEMPHTAAA
AAAGAEQENRDPSDPFSRWTAIDAEGRDSGKVGVGGGERGEEEEPTARGE
PPLPKARPAAPRRVSFAPADQVYKLEDPYYGSSSSSNNNQQDDWEDDDHD
DDGKEEDHEEVEAPRPPPPAPTPMRASGATGPSRRLRQTWGTSTSSTRDS
RARPGCSMGASDDVFVAPSRMQEPSLWSTAAEQAELERRMTEASMSTEFD
GSAVPEPAAPAYRSAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPMRKGKQ
VSKSHLSKVQEQRITEEDLEFDGMEPDCSAIMGFGSSTAGRMWPHEELEW
YGGRKMFAELDRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf