prot_Ecto-sp13_S_contig86960.20157.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig86960.20157.1
Unique Nameprot_Ecto-sp13_S_contig86960.20157.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length37
Homology
BLAST of mRNA_Ecto-sp13_S_contig86960.20157.1 vs. uniprot
Match: A0A6H5KRU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRU5_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.720e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query:    1 VNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDP 36
            VNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDP
Sbjct:  136 VNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDP 171          
BLAST of mRNA_Ecto-sp13_S_contig86960.20157.1 vs. uniprot
Match: A0A6H5JCH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH5_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 8.660e-7
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    2 NLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDP 36
            NLGKVI TLREDYP +  +P  FDI+T +++LRDP
Sbjct:  113 NLGKVIDTLREDYPTMLDEPLNFDIYTPDLQLRDP 147          
BLAST of mRNA_Ecto-sp13_S_contig86960.20157.1 vs. uniprot
Match: A0A7S0PU43_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PU43_9EUKA)

HSP 1 Score: 50.1 bits (118), Expect = 5.200e-6
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 VNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRD 35
            +N G+VI TLR DYPR+F D P   IF E++ELRD
Sbjct:   93 LNQGRVIDTLRYDYPRLFVDKPDLSIFREDVELRD 127          
BLAST of mRNA_Ecto-sp13_S_contig86960.20157.1 vs. uniprot
Match: A0A7J7CGB3_TRIWF (Uncharacterized protein n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CGB3_TRIWF)

HSP 1 Score: 49.3 bits (116), Expect = 9.560e-6
Identity = 20/37 (54.05%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 VNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPV 37
            VNLG  I TLRED+P++F+   +FDI+ ++I LRDP+
Sbjct:   90 VNLGYAIRTLREDFPQLFYRELSFDIYRDDIVLRDPI 126          
BLAST of mRNA_Ecto-sp13_S_contig86960.20157.1 vs. uniprot
Match: D8LJ76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ76_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 3.730e-5
Identity = 20/35 (57.14%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    2 NLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDP 36
            NLGKVI TLREDY  +  +P  F+I+T +++LRDP
Sbjct:   25 NLGKVIDTLREDYATMLDEPLNFEIYTPDLQLRDP 59          
BLAST of mRNA_Ecto-sp13_S_contig86960.20157.1 vs. uniprot
Match: K3Z8S8_SETIT (Uncharacterized protein n=5 Tax=Paniceae TaxID=147428 RepID=K3Z8S8_SETIT)

HSP 1 Score: 46.6 bits (109), Expect = 9.240e-5
Identity = 18/37 (48.65%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 VNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPV 37
            VN+G  I TLRE+ P +F+  P+FDI+ ++I L+DP+
Sbjct:  107 VNMGDAIRTLREELPVVFYREPSFDIYRDDIVLKDPL 143          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86960.20157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KRU5_9PHAE3.720e-16100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JCH5_9PHAE8.660e-762.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0PU43_9EUKA5.200e-660.00Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7J7CGB3_TRIWF9.560e-654.05Uncharacterized protein n=1 Tax=Tripterygium wilfo... [more]
D8LJ76_ECTSI3.730e-557.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3Z8S8_SETIT9.240e-548.65Uncharacterized protein n=5 Tax=Paniceae TaxID=147... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018790Protein of unknown function DUF2358PFAMPF10184DUF2358coord: 5..37
e-value: 6.3E-5
score: 23.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig86960contigEcto-sp13_S_contig86960:460..570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig86960.20157.1mRNA_Ecto-sp13_S_contig86960.20157.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig86960 460..570 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig86960.20157.1 ID=prot_Ecto-sp13_S_contig86960.20157.1|Name=mRNA_Ecto-sp13_S_contig86960.20157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=37bp
VNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018790DUF2358