prot_Ecto-sp13_S_contig86781.20129.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig86781.20129.1
Unique Nameprot_Ecto-sp13_S_contig86781.20129.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
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BLAST of mRNA_Ecto-sp13_S_contig86781.20129.1 vs. uniprot
Match: D7FJ00_ECTSI (Suppressor of lin-12-like protein-related / sel-1 protein-related n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ00_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.110e-30
Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = 0 
Query:    1 DSVASLNAGTWNHVMFTFDNITSGEFSSTIFINGTLDTSVQFDGTIVLGNDGPLHIGRDTSN 62
            DSVASLNAGTWNHV+FTFDN TSGEFSSTIFINGTLD SVQFDGT VLGNDGPLHIGRDTSN
Sbjct:  288 DSVASLNAGTWNHVVFTFDNTTSGEFSSTIFINGTLDISVQFDGTTVLGNDGPLHIGRDTSN 349
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86781.20129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJ00_ECTSI1.110e-3093.55Suppressor of lin-12-like protein-related / sel-1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 1..62
e-value: 9.9E-9
score: 37.4
NoneNo IPR availablePFAMPF13385Laminin_G_3coord: 2..61
e-value: 8.7E-10
score: 38.9
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 3..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig86781contigEcto-sp13_S_contig86781:379..564 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig86781.20129.1mRNA_Ecto-sp13_S_contig86781.20129.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig86781 379..564 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig86781.20129.1 ID=prot_Ecto-sp13_S_contig86781.20129.1|Name=mRNA_Ecto-sp13_S_contig86781.20129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
DSVASLNAGTWNHVMFTFDNITSGEFSSTIFINGTLDTSVQFDGTIVLGN
DGPLHIGRDTSN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom_sf