prot_Ecto-sp13_S_contig867.20117.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig867.20117.1
Unique Nameprot_Ecto-sp13_S_contig867.20117.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length325
Homology
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BLAST of mRNA_Ecto-sp13_S_contig867.20117.1 vs. uniprot
Match: A0A6H5K8M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M6_9PHAE)

HSP 1 Score: 444 bits (1141), Expect = 3.660e-154
Identity = 271/303 (89.44%), Postives = 274/303 (90.43%), Query Frame = 0 
Query:    1 MGKANRGGQKRKEAPARKQLQGRGGNSGLLHKNNQKHGAHRE-GLDGAAAMGKRTLAQQLLQPNKRARGGKRRRKSSGAPSKPGSSETAVIQAEYAAVDAREKAKEDSEYARRVR-PVRIRLAPSTTELRMPSEGEVSMASLRASSSARMVEALLQSITDEPAPDAPPSRPVRSAGRKRKGNPFAALGDDGSDSDSDS--GSWGAAGGRVGIISNGRTSSSKPDQRTGGLFTNSTGRAFGSGPPAEEGGGLMAFASPSSFAGFSGTGGGAGAGRMGSVXFGGSKGGALAGAAAXXATMGGGPQ 299
            MGKANRGGQKRKEAPARKQLQG+GGNSGLLHKNN KHGAHR  G DGAAAMGKRTLAQQLLQPNKRARGGKRRRKSSG PSKPGSSETAVIQAEYAAVDAREKAKEDSE ARRVR PVRIRLAPSTTELRMPSEGEVSMASLRASSSARMVEALLQSITDEPAPDAPPSRPVRSAGRKRKGNPFAAL DDGSDSDSDS  GS GAAGGRVGII NGRTS+SKP QRTGGLFTNSTG AFGSGPPAEEGGGLMAFASPSSFAGF+G         MGSV FGGSK GALAGA A  ATMG GPQ
Sbjct:    1 MGKANRGGQKRKEAPARKQLQGKGGNSGLLHKNNHKHGAHRAAGFDGAAAMGKRTLAQQLLQPNKRARGGKRRRKSSGTPSKPGSSETAVIQAEYAAVDAREKAKEDSEKARRVRAPVRIRLAPSTTELRMPSEGEVSMASLRASSSARMVEALLQSITDEPAPDAPPSRPVRSAGRKRKGNPFAALEDDGSDSDSDSDHGSLGAAGGRVGIILNGRTSNSKPAQRTGGLFTNSTGCAFGSGPPAEEGGGLMAFASPSSFAGFAGXXXXXXXXXMGSVGFGGSKVGALAGATAAVATMGAGPQ 303
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BLAST of mRNA_Ecto-sp13_S_contig867.20117.1 vs. uniprot
Match: D7G3V9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V9_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 4.240e-94
Identity = 183/209 (87.56%), Postives = 184/209 (88.04%), Query Frame = 0 
Query:   82 PGSSETAVIQAEYAAVDAREKAKEDSEYARRVR-PVRIRLAPSTTELRMPSEGEVSMASLRASSSARMVEALLQSITDEPAPDAPPSRPVRSAGRKRKGNPFAALGDDGSDSDSDS--GSWGAAGGRVGIISNGRTSSSKPDQRTGGLFTNSTGRAFGSGPPAEEGGGLMAFASPSSFAGFSGTGGGAGAGRMGSVXFGGSKGGALAGA 287
            PGSSETAVIQAEYAAVDAREKAKEDSE ARR+R PVRIRLAPSTTELRMPSEGEVSMASLRASSSARMVEALLQSITDEPAPDAPPSRPVRSAGRKRKGNPFAALGDDGSDS      GS GAAGGRVGIISNGRTSSSKP QRTG LFTNS GRAFGSGPPAEEGGGLMAFASPSSFAGFSGT            XFGGSK GALAGA
Sbjct:   20 PGSSETAVIQAEYAAVDAREKAKEDSEKARRLRAPVRIRLAPSTTELRMPSEGEVSMASLRASSSARMVEALLQSITDEPAPDAPPSRPVRSAGRKRKGNPFAALGDDGSDSXXXXXXGSLGAAGGRVGIISNGRTSSSKPAQRTGALFTNSAGRAFGSGPPAEEGGGLMAFASPSSFAGFSGTXXXXXXXXXXXXXFGGSKVGALAGA 228
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig867.20117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K8M6_9PHAE3.660e-15489.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3V9_ECTSI4.240e-9487.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig867contigEcto-sp13_S_contig867:7638..11150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig867.20117.1mRNA_Ecto-sp13_S_contig867.20117.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig867 7638..11150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig867.20117.1 ID=prot_Ecto-sp13_S_contig867.20117.1|Name=mRNA_Ecto-sp13_S_contig867.20117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=325bp
MGKANRGGQKRKEAPARKQLQGRGGNSGLLHKNNQKHGAHREGLDGAAAM
GKRTLAQQLLQPNKRARGGKRRRKSSGAPSKPGSSETAVIQAEYAAVDAR
EKAKEDSEYARRVRPVRIRLAPSTTELRMPSEGEVSMASLRASSSARMVE
ALLQSITDEPAPDAPPSRPVRSAGRKRKGNPFAALGDDGSDSDSDSGSWG
AAGGRVGIISNGRTSSSKPDQRTGGLFTNSTGRAFGSGPPAEEGGGLMAF
ASPSSFAGFSGTGGGAGAGRMGSVGFGGSKGGALAGAAAAVATMGGGPQP
AASAAAASVGSGAGNADDDDDPDL*
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