prot_Ecto-sp13_S_contig867.20115.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig867.20115.1
Unique Nameprot_Ecto-sp13_S_contig867.20115.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length259
Homology
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Match: D7G3W0_ECTSI (ERCC4 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W0_ECTSI)

HSP 1 Score: 493 bits (1269), Expect = 2.030e-173
Identity = 248/258 (96.12%), Postives = 254/258 (98.45%), Query Frame = 0
Query:    1 MQVARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLTRLIYLLEGKLEGHVAYKSSVDKSKTMRTMEADTLAEGFAIKRVDNVEETAAFLLSLSLQLMASQGAETIQEYCSNPSRPKVSFGEWSTAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLRLADGGKKGSCRTVNEPTARKLVALFTDKPQS 258
            MQVARLQTGDFAWAWRRRRSG+RGTDLLTG SEE+LLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGL+RLIYLLEGKLEGHVAYKSSVDK+KTMRTME DTLAEGFAIKRVDNVEETAAFLLSLSLQLMASQGAETIQEYCSNPSRPKVSFGEWSTAMKPKRLEPRTV MEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKL+LADGGKKGSCRTVNEPTARKLVALF DKPQ+
Sbjct:  159 MQVARLQTGDFAWAWRRRRSGSRGTDLLTGPSEELLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLSRLIYLLEGKLEGHVAYKSSVDKTKTMRTMETDTLAEGFAIKRVDNVEETAAFLLSLSLQLMASQGAETIQEYCSNPSRPKVSFGEWSTAMKPKRLEPRTVTMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLKLADGGKKGSCRTVNEPTARKLVALFADKPQA 416          
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Match: A0A6H5K3W4_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3W4_9PHAE)

HSP 1 Score: 464 bits (1193), Expect = 6.570e-164
Identity = 236/258 (91.47%), Postives = 250/258 (96.90%), Query Frame = 0
Query:    1 MQVARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLTRLIYLLEGKLEGHVAYKSSVDKSKTMRTMEADTLAEGFAIKRVDNVEETAAFLLSLSLQLMASQGAETIQEYCSNPSRPKVSFGEWSTAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLRLADGGKKGSCRTVNEPTARKLVALFTDKPQS 258
            M+VARLQTGDFAWAWRRRRSG RGT+LLTGSSEEVLLLDCLVERKKEDD+INSVEGLAGR+ AQKRRMSL GL+RLIYLLEGKLEGHVAYKSSVDKSKTMRTME DTLAEGFAIKRVDNVE TAAFLLSLSLQLMASQGAETIQEYCSNPSRPKVSFGEWSTAM+PKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTP+RFI+ALR+C+SPEEQ+SL  +L+LADGGKKGSCRTVNEPTARKLVALF DKPQ+
Sbjct:   28 MRVARLQTGDFAWAWRRRRSGVRGTNLLTGSSEEVLLLDCLVERKKEDDMINSVEGLAGRHLAQKRRMSLRGLSRLIYLLEGKLEGHVAYKSSVDKSKTMRTMETDTLAEGFAIKRVDNVEGTAAFLLSLSLQLMASQGAETIQEYCSNPSRPKVSFGEWSTAMEPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPVRFIQALRKCNSPEEQESL--QLKLADGGKKGSCRTVNEPTARKLVALFADKPQA 283          
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Match: M4A614_XIPMA (ERCC4 domain-containing protein n=18 Tax=Poeciliinae TaxID=586240 RepID=M4A614_XIPMA)

HSP 1 Score: 106 bits (265), Expect = 1.550e-22
Identity = 72/239 (30.13%), Postives = 119/239 (49.79%), Query Frame = 0
Query:    3 VARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLTRLIYLLEGKLEGHVAYKSSVDKSKTMRTMEADTLAEGFAIKRVDNVEETAAFLLSLSLQLMASQGAETI--------------QEYCSNPSRPKVSFGEWSTAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLR 227
            V +L  GDF W  R + +   G   L   +   L+LD ++ERK+ DD+  S+  + GR+R QK R+  CGL R IYL+EG      A   S+ ++   + +    + +GF +KRV +V E+AA+L  ++  L      +T+              +E   NPS   +SF E++      + +  TV   FAR L+ ++G+S   A  I  ++ TP   + A  +C S  E++ L+  +R
Sbjct:  360 VRKLNVGDFLWVAREKVAPVPGR--LRAPAARELVLDYIIERKRMDDLCGSI--IDGRFREQKFRLKRCGLRRPIYLVEGSSSS--AAHLSLPEATLQQAIVNTQVLDGFFVKRVQDVRESAAYLTVMTRYLSKLYQNQTLVCRSRELEGDVPSDEEESGNPSCSLISFAEFNHGAVKNKCQ--TVREVFARQLMQISGLSGHKAAAILEQYGTPHSLLAAYEKCGSESEKEKLLSCIR 590          
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Match: A0A3B4U4H9_SERDU (MUS81 structure-specific endonuclease subunit n=5 Tax=Carangaria TaxID=1489904 RepID=A0A3B4U4H9_SERDU)

HSP 1 Score: 106 bits (264), Expect = 2.130e-22
Identity = 74/243 (30.45%), Postives = 121/243 (49.79%), Query Frame = 0
Query:    3 VARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLTRLIYLLE--GKLEGHVAYKSSVDKSKTMRTMEADTLAEGFAIKRVDNVEETAAFLLSL----------------SLQLMASQGAETIQEYCSNPSRPKVSFGEWSTAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLR 227
            V +L  GDF W  R + +   G   L   +   L+LD ++ERK+ DD+  S+  + GR+R QK R+  CGL R +YL+E  G    H++   +  +   + T   D    GF +KRV +V E+AA+L  +                S QL   +G++  +E    PS   +SF E++      + +  TV   FAR L+ ++G+S + A  I  ++ TP   + A  QC+S  E++ L+  +R
Sbjct:  365 VRKLNVGDFLWVAREKMAPVPGQ--LRAPAGRELVLDYIIERKRMDDLCGSI--IDGRFREQKFRLKRCGLRRPVYLVEECGTAASHLSLPEATLQQAIVNTQVVD----GFFVKRVQDVRESAAYLTVMTRYLTKLYQNRTLICRSRQLEGDEGSD--EEERGIPSCALISFAEFNYGAVKNKCQ--TVREVFARQLMQISGLSGDKAAAILEQYSTPHSLLAAYEQCASEAEKEKLLSSIR 595          
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Match: UPI0014900039 (crossover junction endonuclease MUS81 n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI0014900039)

HSP 1 Score: 106 bits (264), Expect = 2.130e-22
Identity = 73/241 (30.29%), Postives = 120/241 (49.79%), Query Frame = 0
Query:    3 VARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLTRLIYLLE--GKLEGHVAYKSSVDKSKTMRTMEADTLAEGFAIKRVDNVEETAAFLLSLSLQLMASQGAETI--------------QEYCSNPSRPKVSFGEWSTAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLR 227
            V +L  GDF W  R + +   G   L   +   L+LD ++ERK+ DD+  S+  + GR+R QK R+  CGL R IYL+E  GK   H++   +  +   + T   D    GF +KRV +V E+AA+L  ++  L       T+              +E   NPS   +SF E++      + +  TV   FAR L+ ++G+S + A  +  ++ TP   + A  +C+S  E++ L+  +R
Sbjct:  365 VRKLNVGDFLWVAREKVAPVPGQ--LRAPAGRELVLDYIIERKRMDDLCGSI--IDGRFREQKFRLKRCGLHRPIYLVEECGKAASHMSLPETTLQQAIVNTQVVD----GFFVKRVQDVRESAAYLTVMTRYLTKLYQNRTLICRSRELEGDTGSDEEGGGNPSCSLISFAEFNHGAVKNKCQ--TVKEVFARQLMQISGLSGDKAAAVLEQYSTPHSLLTAYDRCASEAEKEKLLSSIR 595          
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Match: A0A6P7I3J4_9TELE (crossover junction endonuclease MUS81 n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7I3J4_9TELE)

HSP 1 Score: 106 bits (264), Expect = 2.170e-22
Identity = 75/242 (30.99%), Postives = 122/242 (50.41%), Query Frame = 0
Query:    3 VARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLTRLIYLLE--GKLEGHVAYKSSVDKSKTMRTMEADTLAEGFAIKRVDNVEETAAFLLSLSLQLMASQGAETI--------------QEYCSNPSRPKVSFGEWS-TAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLR 227
            + +L  GDF W  R + +   G   L       L+LD ++ERK+ DD+  S+  + GR+R QK R+  CGL R IYL+E  G    H++   +  +   + T   D    GF +KRV +V E+AA+L  ++  L       T+              +E   +PS   +SF E++ +A+K K    +TV   FAR L+ ++G+S + A  I  ++ TP   + A  QC+S  E++ L+  +R
Sbjct:  378 IRKLNVGDFLWVAREKMAPVPGQ--LRAPEGRELVLDYIIERKRMDDLCGSI--IDGRFREQKFRLKRCGLRRPIYLVEECGTAASHLSLPETTLQQAIVNTQVVD----GFFVKRVQDVRESAAYLTVMTRYLTKLYQGRTLVCRSRELEGDGGSEEEDRGSPSGALISFAEFNYSAVKNKC---QTVREVFARQLMQISGLSGDKAAAILEQYSTPHSLLTAYGQCASEAEKEKLLSSIR 608          
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Match: A0A3B5M007_9TELE (MUS81 structure-specific endonuclease subunit n=2 Tax=Poeciliinae TaxID=586240 RepID=A0A3B5M007_9TELE)

HSP 1 Score: 105 bits (263), Expect = 2.340e-22
Identity = 72/239 (30.13%), Postives = 119/239 (49.79%), Query Frame = 0
Query:    3 VARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLTRLIYLLEGKLEGHVAYKSSVDKSKTMRTMEADTLAEGFAIKRVDNVEETAAFLLSLSLQLMASQGAETI--------------QEYCSNPSRPKVSFGEWSTAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLR 227
            V +L  GDF W  R + +   G   L   +   L+LD ++ERK+ DD+  S+  + GR+R QK R+  CGL R IYL+EG      A   S+ ++   + +    + +GF +KRV +V E+AA+L  ++  L      +T+              +E   NPS   +SF E++      + +  TV   FAR L+ ++G+S   A  I  ++ TP   + A  +C S  E++ L+  +R
Sbjct:  281 VRKLNVGDFLWVAREKVAPVPGQ--LRAPAARELVLDYIIERKRMDDLCGSI--IDGRFREQKFRLKRCGLRRPIYLVEGSSSS--AAHLSLPEATLQQAIVNTQVLDGFFVKRVQDVRESAAYLTVMTRYLSKLYQNQTLVCRSRELEGDVPSDEEERGNPSCSLISFAEFNHGAVKNKCQ--TVREVFARQLMQISGLSGHKAAAILEQYGTPHSLLAAYEKCGSESEKEKLLSCIR 511          
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Match: H2TXA7_TAKRU (ERCC4 domain-containing protein n=4 Tax=Takifugu TaxID=31032 RepID=H2TXA7_TAKRU)

HSP 1 Score: 105 bits (263), Expect = 2.770e-22
Identity = 71/239 (29.71%), Postives = 121/239 (50.63%), Query Frame = 0
Query:    3 VARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLTRLIYLLEGKLEGHVAYKSSVDKSKTMRTMEADTLAEGFAIKRVDNVEETAAFLLSLSLQLMASQGAETI--------------QEYCSNPSRPKVSFGEWSTAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLR 227
            V +L  GDF W  R + S   G   +    E  L+LD ++ERK+ DD+ +S+  + GR+R QK R+  CGL + IYL+E  L G+ A   S+ +    + + +  + +GF +KRV +V E+AA+L  ++ QL       T+              ++    PS   +SF E++      + +  TV   FAR L+ ++G+S + A  I   + TP   + A   C++  E++ L+  +R
Sbjct:  341 VRKLNVGDFLWVAREKVSPVPGQLQVPVGRE--LVLDYIIERKRIDDLCSSI--IDGRFREQKFRLKRCGLRKPIYLVE--LHGNAASHQSLPEKTLQQAIVSTQVVDGFFVKRVQDVRESAAYLTIMTRQLTKLYQNRTLVCRSRELEGDQVGQEDRAGIPSCSLISFAEFNHGAVKNKCQ--TVKEVFARQLMQISGLSGDKAAAILEHYNTPQSLVTAYDHCATDAEKEKLLSCIR 571          
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Match: A0A4W6CFE8_LATCA (MUS81 structure-specific endonuclease subunit n=7 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6CFE8_LATCA)

HSP 1 Score: 105 bits (263), Expect = 2.890e-22
Identity = 75/243 (30.86%), Postives = 119/243 (48.97%), Query Frame = 0
Query:    3 VARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLTRLIYLLE--GKLEGHVAYKSSVDKSKTMRTMEADTLAEGFAIKRVDNVEETAAFL----------------LSLSLQLMASQGAETIQEYCSNPSRPKVSFGEWSTAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLR 227
            V +L  GDF W  R + +   G   L       L+LD ++ERK+ DD+  S+  + GR+R QK R+  CGL R +YL+E  G    H++   +  +   + T   D    GF +KRV +V E+AA+L                L  S +L   +G+   +E   NPS   +SF E++      + +  TV   FAR L+ ++G+S + A  I  ++ TP   + A  QC S  E++ L+  +R
Sbjct:  365 VRKLNVGDFLWVAREKVAPVPGQ--LRAPVARELVLDYIIERKRMDDLCGSI--IDGRFREQKFRLKRCGLRRPVYLVEECGTAASHLSLPETTLQQAIVNTQVVD----GFFVKRVQDVRESAAYLTVMTRYLTKLYQNRALLCRSRELEGDEGSG--EEERGNPSCSLISFAEFNHGAVKNKCQ--TVREVFARQLMQISGLSGDKAAAILEQYSTPHSLLSAYEQCRSEAEKEKLLSSIR 595          
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Match: UPI0015E1BBF5 (crossover junction endonuclease MUS81 n=1 Tax=Morone saxatilis TaxID=34816 RepID=UPI0015E1BBF5)

HSP 1 Score: 104 bits (259), Expect = 3.530e-22
Identity = 76/242 (31.40%), Postives = 117/242 (48.35%), Query Frame = 0
Query:    3 VARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDIINSVEGLAGRYRAQKRRMSLCGLTRLIYLLE--GKLEGHVAYKSSVDKSKTMRTMEADTLAEGFAIKRVDNVEETAAFLLSLSLQL---------------MASQGAETIQEYCSNPSRPKVSFGEWSTAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREFPTPMRFIEALRQCSSPEEQKSLVQKLR 227
            V +L  GDF W  R + +   G   L       L+LD ++ERK+ DD+  S+  + GR R QK R+  CGL R IYL+E  GK   H++   S  +   + T   D    GF +KRV +V E+AA+L  ++  L               +   G  + +E    PS   +SF E++      + +  TV   FAR L+ V+G+S + A  I   + TP   + A  QC+S  E++ L+  +R
Sbjct:  152 VRKLNVGDFLWVAREKVAPVPGQ--LRAPVGRELVLDYVIERKRMDDLCGSI--IDGRCREQKFRLKRCGLRRPIYLVEECGKAASHLSLPESTLQQAIVNTQVVD----GFFVKRVQDVRESAAYLTVMTRYLTKLYQNCTLICRSRELEGDGGGSDEEERGTPSCSLISFQEFNHGAVKNKCQ--TVREVFARQLMQVSGLSGDKAAAILELYSTPHSLLAAYEQCASEAEKEKLLSSIR 383          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig867.20115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3W0_ECTSI2.030e-17396.12ERCC4 domain containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K3W4_9PHAE6.570e-16491.47ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
M4A614_XIPMA1.550e-2230.13ERCC4 domain-containing protein n=18 Tax=Poeciliin... [more]
A0A3B4U4H9_SERDU2.130e-2230.45MUS81 structure-specific endonuclease subunit n=5 ... [more]
UPI00149000392.130e-2230.29crossover junction endonuclease MUS81 n=1 Tax=Noto... [more]
A0A6P7I3J4_9TELE2.170e-2230.99crossover junction endonuclease MUS81 n=1 Tax=Para... [more]
A0A3B5M007_9TELE2.340e-2230.13MUS81 structure-specific endonuclease subunit n=2 ... [more]
H2TXA7_TAKRU2.770e-2229.71ERCC4 domain-containing protein n=4 Tax=Takifugu T... [more]
A0A4W6CFE8_LATCA2.890e-2230.86MUS81 structure-specific endonuclease subunit n=7 ... [more]
UPI0015E1BBF53.530e-2231.40crossover junction endonuclease MUS81 n=1 Tax=Moro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.10130coord: 3..187
e-value: 2.2E-25
score: 91.6
NoneNo IPR availablePANTHERPTHR13451:SF0CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 2..253
NoneNo IPR availablePANTHERPTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 2..253
IPR006166ERCC4 domainPFAMPF02732ERCC4coord: 3..129
e-value: 1.5E-11
score: 44.8
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 3..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig867contigEcto-sp13_S_contig867:15..4417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig867.20115.1mRNA_Ecto-sp13_S_contig867.20115.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig867 2..5352 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig867.20115.1 ID=prot_Ecto-sp13_S_contig867.20115.1|Name=mRNA_Ecto-sp13_S_contig867.20115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=259bp
MQVARLQTGDFAWAWRRRRSGARGTDLLTGSSEEVLLLDCLVERKKEDDI
INSVEGLAGRYRAQKRRMSLCGLTRLIYLLEGKLEGHVAYKSSVDKSKTM
RTMEADTLAEGFAIKRVDNVEETAAFLLSLSLQLMASQGAETIQEYCSNP
SRPKVSFGEWSTAMKPKRLEPRTVMMEFARCLLMVNGVSAEGARVIAREF
PTPMRFIEALRQCSSPEEQKSLVQKLRLADGGKKGSCRTVNEPTARKLVA
LFTDKPQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006166ERCC4_domain
IPR011335Restrct_endonuc-II-like