prot_Ecto-sp13_S_contig86625.20108.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig86625.20108.1
Unique Nameprot_Ecto-sp13_S_contig86625.20108.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length68
Homology
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Match: D8LSU0_ECTSI (Similar to helicase, lymphoid-specific isoform 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU0_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 3.070e-36
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
Query:    1 MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 68
            MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE
Sbjct:  804 MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 871          
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Match: A0A6H5KRD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD4_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 3.090e-36
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
Query:    1 MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 68
            MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE
Sbjct: 1072 MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 1139          
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Match: A0A7S3H645_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H645_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.160e-27
Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 0
Query:    1 MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 68
            + +T+ RLDGSTPV +R+ LID F  DTSIPVFLLST+AGGLGINLTAADTV+LHD+DFNPEND+QAE
Sbjct:  202 INLTYLRLDGSTPVKQRQDLIDTFNTDTSIPVFLLSTKAGGLGINLTAADTVVLHDLDFNPENDKQAE 269          
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Match: A0A7S2A6Z7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Z7_TRICV)

HSP 1 Score: 106 bits (265), Expect = 2.210e-27
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 0
Query:    1 MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 68
            +G  F RLDG TP++ER+ LID+F  DTSIPVFLLSTRAGG+GINLTAADT ILHD+DFNP ND QAE
Sbjct:   41 IGFRFLRLDGQTPIAERQGLIDEFNTDTSIPVFLLSTRAGGMGINLTAADTCILHDLDFNPFNDIQAE 108          
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Match: A0A267EFE2_9PLAT (Uncharacterized protein n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267EFE2_9PLAT)

HSP 1 Score: 108 bits (271), Expect = 4.150e-26
Identity = 51/64 (79.69%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    5 FCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 68
            F R+DGSTPV ER+AL+D+F  D+SIPVFLLSTRAGGLGINLTAADTVI+HD+DFNP ND+QAE
Sbjct: 1085 FLRVDGSTPVGERQALLDRFAEDSSIPVFLLSTRAGGLGINLTAADTVIIHDIDFNPYNDKQAE 1148          
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Match: A0A1I8GQ42_9PLAT (Uncharacterized protein n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GQ42_9PLAT)

HSP 1 Score: 108 bits (271), Expect = 4.150e-26
Identity = 51/64 (79.69%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    5 FCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 68
            F R+DGSTPV ER+AL+D+F  D+SIPVFLLSTRAGGLGINLTAADTVI+HD+DFNP ND+QAE
Sbjct: 1167 FLRVDGSTPVGERQALLDRFAEDSSIPVFLLSTRAGGLGINLTAADTVIIHDIDFNPYNDKQAE 1230          
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Match: A0A1I8JF11_9PLAT (Uncharacterized protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8JF11_9PLAT)

HSP 1 Score: 108 bits (271), Expect = 4.170e-26
Identity = 51/64 (79.69%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    5 FCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 68
            F R+DGSTPV ER+AL+D+F  D+SIPVFLLSTRAGGLGINLTAADTVI+HD+DFNP ND+QAE
Sbjct: 2878 FLRVDGSTPVGERQALLDRFAEDSSIPVFLLSTRAGGLGINLTAADTVIIHDIDFNPYNDKQAE 2941          
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Match: A0A7S2CCX4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCX4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.810e-26
Identity = 48/68 (70.59%), Postives = 60/68 (88.24%), Query Frame = 0
Query:    1 MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 68
            + + F RLDGSTPV+ER+ +I++F + T++ VFLLSTRAGGLGINLTAADTVILHD+DFNP +DRQAE
Sbjct:    6 LDLEFMRLDGSTPVAERQGMINEFNSSTTVNVFLLSTRAGGLGINLTAADTVILHDLDFNPIHDRQAE 73          
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Match: A0A067BPT2_SAPPC (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BPT2_SAPPC)

HSP 1 Score: 101 bits (252), Expect = 4.990e-26
Identity = 52/67 (77.61%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQA 67
            +G  F RLDGST VS+R+ALID+F  DTSI VFLLSTRAGGLGINLTAADTVILHD+DFNP  D QA
Sbjct:    2 LGYKFIRLDGSTTVSDRQALIDQFNEDTSIFVFLLSTRAGGLGINLTAADTVILHDLDFNPTIDAQA 68          
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Match: A0A482SY09_9ARCH (DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY09_9ARCH)

HSP 1 Score: 108 bits (269), Expect = 7.440e-26
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAE 68
            M + + RLDGST V ER+ LID F  DTSIPVFLLST+AGGLGINLT+ADTVILHD+DFNPEND+QAE
Sbjct:  558 MSLPYLRLDGSTAVKERQELIDTFNTDTSIPVFLLSTKAGGLGINLTSADTVILHDLDFNPENDKQAE 625          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86625.20108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSU0_ECTSI3.070e-36100.00Similar to helicase, lymphoid-specific isoform 9 n... [more]
A0A6H5KRD4_9PHAE3.090e-36100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3H645_9STRA1.160e-2776.47Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2A6Z7_TRICV2.210e-2775.00Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A267EFE2_9PLAT4.150e-2679.69Uncharacterized protein n=2 Tax=Macrostomum lignan... [more]
A0A1I8GQ42_9PLAT4.150e-2679.69Uncharacterized protein n=2 Tax=Macrostomum lignan... [more]
A0A1I8JF11_9PLAT4.170e-2679.69Uncharacterized protein n=1 Tax=Macrostomum lignan... [more]
A0A7S2CCX4_9STRA4.810e-2670.59Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
A0A067BPT2_SAPPC4.990e-2677.61Helicase C-terminal domain-containing protein (Fra... [more]
A0A482SY09_9ARCH7.440e-2676.47DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..68
e-value: 2.1E-28
score: 101.2
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 2..68
NoneNo IPR availablePANTHERPTHR10799:SF964SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A CONTAINING DEAD/H BOX 1coord: 2..68
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 2..67
e-value: 6.3E-11
score: 42.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..68
score: 10.016
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig86625contigEcto-sp13_S_contig86625:42..245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig86625.20108.1mRNA_Ecto-sp13_S_contig86625.20108.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig86625 36..245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig86625.20108.1 ID=prot_Ecto-sp13_S_contig86625.20108.1|Name=mRNA_Ecto-sp13_S_contig86625.20108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp
MGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAAD
TVILHDVDFNPENDRQAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase