prot_Ecto-sp13_S_contig8659.20100.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8659.20100.1
Unique Nameprot_Ecto-sp13_S_contig8659.20100.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8659.20100.1 vs. uniprot
Match: A0A6H5K5Q1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Q1_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 9.020e-12
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:   95 SFKLVVFVVYRLMSSSTFSKACVPGRKFDLQLCSCIHWSM 134
            +F+LVVF+VYR MSSSTFSKA VPG +FDL+LCSCIHWSM
Sbjct:   12 TFELVVFLVYRPMSSSTFSKAYVPGPEFDLKLCSCIHWSM 51
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BLAST of mRNA_Ecto-sp13_S_contig8659.20100.1 vs. uniprot
Match: A0A6H5JWM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM6_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 4.550e-11
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0 
Query:   95 SFKLVVFVVYRLMSSSTFSKACVPGRKFDLQLCSCIHWSM 134
            +F+LVVF+VYR MSSSTFSKA VPG +FDL+LCSC H SM
Sbjct:   12 TFELVVFLVYRPMSSSTFSKAYVPGPEFDLKLCSCTHSSM 51
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BLAST of mRNA_Ecto-sp13_S_contig8659.20100.1 vs. uniprot
Match: A0A6H5JK31_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK31_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.000e-9
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:    1 MANRSFSLCQKSLKNVFPSLSILTISLPAFSTHFPCP 37
            MANRSF LCQ+ LKNV PSLSI TISLPAFSTH  CP
Sbjct:    1 MANRSFLLCQRWLKNVSPSLSIPTISLPAFSTHLLCP 37
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8659.20100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K5Q1_9PHAE9.020e-1280.00Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JWM6_9PHAE4.550e-1175.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK31_9PHAE2.000e-981.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..134
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8659contigEcto-sp13_S_contig8659:4842..5246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8659.20100.1mRNA_Ecto-sp13_S_contig8659.20100.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8659 4827..5844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8659.20100.1 ID=prot_Ecto-sp13_S_contig8659.20100.1|Name=mRNA_Ecto-sp13_S_contig8659.20100.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
MANRSFSLCQKSLKNVFPSLSILTISLPAFSTHFPCPSAANVFSWLSHAS
NISLYFSSTFPSSELRALPSSSCTAFTPRLHEHGLRIRSHTQSQSFKLVV
FVVYRLMSSSTFSKACVPGRKFDLQLCSCIHWSM*
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