prot_Ecto-sp13_S_contig86535.20094.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig86535.20094.1
Unique Nameprot_Ecto-sp13_S_contig86535.20094.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length40
Homology
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BLAST of mRNA_Ecto-sp13_S_contig86535.20094.1 vs. uniprot
Match: D8LGE6_ECTSI (Enkurin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE6_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 2.820e-13
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 0 
Query:    1 MVNLDTFGKLRRKEQMETQLKDLEKDIEKLEKTPVLVCP 39
            MVNLDTFGKLRRKEQMETQLK LEKDIEKLEKTPVL+ P
Sbjct:  235 MVNLDTFGKLRRKEQMETQLKGLEKDIEKLEKTPVLIRP 273
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BLAST of mRNA_Ecto-sp13_S_contig86535.20094.1 vs. uniprot
Match: A0A6H5LFQ2_9PHAE (Enkurin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFQ2_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 9.320e-13
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 0 
Query:    1 MVNLDTFGKLRRKEQMETQLKDLEKDIEKLEKTPVLVCP 39
            MVNLDTFGKLRRKEQME QLK LEKDIEKLEKTPVL+ P
Sbjct:  222 MVNLDTFGKLRRKEQMEKQLKGLEKDIEKLEKTPVLISP 260
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86535.20094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGE6_ECTSI2.820e-1392.31Enkurin domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5LFQ2_9PHAE9.320e-1389.74Enkurin domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
IPR027012Enkurin domainPFAMPF13864Enkurincoord: 2..32
e-value: 8.3E-8
score: 32.6
IPR027012Enkurin domainPROSITEPS51665ENKURINcoord: 1..38
score: 11.172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig86535contigEcto-sp13_S_contig86535:340..459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig86535.20094.1mRNA_Ecto-sp13_S_contig86535.20094.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig86535 340..468 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig86535.20094.1 ID=prot_Ecto-sp13_S_contig86535.20094.1|Name=mRNA_Ecto-sp13_S_contig86535.20094.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=40bp
MVNLDTFGKLRRKEQMETQLKDLEKDIEKLEKTPVLVCP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027012Enkurin_dom