prot_Ecto-sp13_S_contig864.20083.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig864.20083.1
Unique Nameprot_Ecto-sp13_S_contig864.20083.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length569
Homology
BLAST of mRNA_Ecto-sp13_S_contig864.20083.1 vs. uniprot
Match: D7G5J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J9_ECTSI)

HSP 1 Score: 508 bits (1308), Expect = 1.430e-176
Identity = 237/257 (92.22%), Postives = 244/257 (94.94%), Query Frame = 0
Query:   10 QSSILVLEACLHRSIWDSLTALSTAVLHLVPHRQRVSCDGFTSGCKAVLRRRTRMLMWGWTLLPGLLLVLTPFIEESGLAPVTGAPSGVEPADACADFAPGQYTGSGWTPEDCLHVWNGFNDTVWEQFHPRMPDADLWIDTAEELRRAGSPCLVGSIPNGDGAGSTTIRHLATWIFSREMGCDWVTPDWGKKFVGGRGGTAVMYCHRAGTAAEMDPSKTKEELKAMRRCVIVDWLSYFQFDVPSVPSPVHEKLMVAK 266
            QS ILVLEACLHRS+W+SLTA+STAV H +PHRQRVSCDGFTSGCK VL RRTRMLM  WTLLPGLLLVLTPF EESGLAPV GA SGVEPADACADFAPGQYTGSGWTPEDCLHVWN FNDTVWEQFHPRMPDADLWIDTAEELRRAGSPCLVGSIPNGDGAGSTTIRHLATWIFSREMGCDWVTPDWGKKFVGGR GTAVMYCHRAGTAAEMDPSKTKEELKAMRRCVI+DWLSYFQFD+PSVPSPVHEKLMV +
Sbjct:   10 QSLILVLEACLHRSVWESLTAVSTAVSHFLPHRQRVSCDGFTSGCKVVLGRRTRMLMSRWTLLPGLLLVLTPFFEESGLAPVAGALSGVEPADACADFAPGQYTGSGWTPEDCLHVWNDFNDTVWEQFHPRMPDADLWIDTAEELRRAGSPCLVGSIPNGDGAGSTTIRHLATWIFSREMGCDWVTPDWGKKFVGGRSGTAVMYCHRAGTAAEMDPSKTKEELKAMRRCVIIDWLSYFQFDIPSVPSPVHEKLMVVE 266          
BLAST of mRNA_Ecto-sp13_S_contig864.20083.1 vs. uniprot
Match: D7G5J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J8_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 5.990e-140
Identity = 198/208 (95.19%), Postives = 201/208 (96.63%), Query Frame = 0
Query:  361 MGDRRAFYDGSPQYFHNVELIMETVADEFRERGLPQPLFHVFSETLSPCPSTVTGLFDEFPTWPVELDRIEECLAATTPRDCPEKQAGTFCTPKRAGIFHIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISFFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLSSRSIFSAALDTLLVAKIRR 568
            MGDRRAFYDGS QYFHNVELIMETVADEFRERGLP+PLFHVFSETLSPCPSTVTGLFDEFP WPVELD+IEECLAA TP DCPEKQAGTFCTPKRAGIF IRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGIS FSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVL+SRSIFSAALDTLLVAK RR
Sbjct:    1 MGDRRAFYDGSLQYFHNVELIMETVADEFRERGLPEPLFHVFSETLSPCPSTVTGLFDEFPIWPVELDKIEECLAAATPIDCPEKQAGTFCTPKRAGIFRIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISLFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLTSRSIFSAALDTLLVAKSRR 208          
BLAST of mRNA_Ecto-sp13_S_contig864.20083.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 9.000e-97
Identity = 176/398 (44.22%), Postives = 235/398 (59.05%), Query Frame = 0
Query:  176 TIRHLATWIFSREMGCDWVTPD-WGKKFVGGRGGTAVMYCHRAGTAAEMDP---SKTKEELKAM-RRCVIVDWLSYFQFDVPSVPSPVHEKLMVAKKRSFTQSILEMQNK-LQQSGIEGQRWDRVVFSLTATLASQH-LVNVGSWDERKRKIVREVLQEARSNFHRHPRPWYDENPRCHFEDDRFHFAVHIRMGDRRAFYDGSPQYFHNVELIMETVADEFRERGLPQPLFHVFSETLSPCPSTVTGLFDEFPTWPVELDRIEECLAATTPRDCPEKQAGTFCTPKRAGIFHIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTR-GISFFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLSSRSIFSAALDTLLVAK 565
            T+RHLA  IF+ E+GCDW+TP  WG   V G G  A +YCH A T  E      + TK+E + M  RC +V+W  YF  +  SV  P +    V +  +     LEM  K    +G +   WDR+   L    AS + L ++GSWD  KR++VR+VL++ R NFH+ PRPWY++ P C +E+   +FA+H+RMGDRR     +P+YF  +E  M TV     ER    P+FHVFSE L PCP      F EFP WPVE D++  C      +D P  +  TF          +  + ++LH+G +    +SCM+ ADG+LMGCSTFGQ+AG+L   GISFFST C G   P Q + IPPLA+AE+G +WVPI GSW DPVL ++ +FSA LD LL  K
Sbjct:    2 TMRHLAAKIFAEEVGCDWLTPSQWGMP-VAGDGSGASVYCHSAATYDEQRRGFGNATKDEAEIMVHRCSVVNWPEYFNLNASSVELPANCTFRVVEADTSRNHDLEMALKETDANGFDNLGWDRLKIVLRQPHASSNFLASLGSWDGWKREVVRKVLRQFRENFHQSPRPWYNDEPECGYEESELNFALHVRMGDRRELEGVTPEYFSLLEGFMATVTQAVVEREQAAPMFHVFSEALYPCPFPENATFTEFPFWPVERDQVSVCPRNAAEQDGPASRPDTF---------RVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDGISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHVFSAVLDELLKRK 389          
BLAST of mRNA_Ecto-sp13_S_contig864.20083.1 vs. uniprot
Match: A0A6H5JW68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW68_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 1.260e-95
Identity = 142/276 (51.45%), Postives = 188/276 (68.12%), Query Frame = 0
Query:  291 WDRVVFSLTATLASQHLVNVGSWDERKRKIVREVLQEARSNFHRHPRPWYDENPRCHFEDDRFHFAVHIRMGDRR-AFYDGSPQYFHNVELIMETVADEFRERGLPQPLFHVFSETLSPCPSTVTGLFDEFPTWPVELDRIEECLAATTPRDCPEKQAGT-FCTPKRAGIFHIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISFFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLSSRSIFSAALDTLLVA 564
            W++ +  +    A ++   VGSW+ RKR+ VR VL   + +FH  PRPW +  P C F   +   A+H+R+GDR+ +  D S  YF  +E  METVA     RG   P+FH+FSET S CPS   G F+EFP WPVE+D++  C+ ATTP +CPEK AG   C P R+GIF +  + + LHVG DVQN++SCM  A+GVLMGCSTFGQ+AG+L++GI FFST C+G  T  QY+ IPP+AIA +GH+WVP+ GSWHDPV++S SI  A+LD LL A
Sbjct:   15 WNQWLLMMNLMTAPRYFSAVGSWNARKREAVRTVLHTFKQSFHTFPRPWNNIQPECAFSQSKLDIAIHVRLGDRKDSLNDDS--YFDYLEDFMETVASAAIARGQDHPVFHIFSETHSRCPSAENGAFEEFPKWPVEMDQVSTCMEATTPEECPEKDAGAPSCNPTRSGIFAVDGREMNLHVGLDVQNDLSCMANANGVLMGCSTFGQVAGVLSKGIRFFSTECAGWRTTIQYKLIPPMAIAGRGHMWVPVSGSWHDPVIASESILGASLDLLLGA 288          
BLAST of mRNA_Ecto-sp13_S_contig864.20083.1 vs. uniprot
Match: A0A6H5L814_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L814_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.730e-64
Identity = 109/235 (46.38%), Postives = 142/235 (60.43%), Query Frame = 0
Query:  340 YDENPRCHFEDDRFHFAVHIRMGDRRAFYDGSPQYFHNVELIMETVADEFRERGLPQPLFHVFSETLSPCPSTVTGLFDEFPTWPVELDRIEE--------CLAATTPRDCPEKQAGTFCTPKRAGIFHIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRG-ISFFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLSSRSIFSAALDTLLVAK 565
            Y++ P C +E+ + +FA+H+RMGDRR     +P+YF  +E  M TV     ER    P+FHVFSE L PCPS     F EFP WPVE D+++          L+      C    A       R G F +  + ++LH+G +    +SCM+ ADG+LMGCSTFGQ+AG+L    ISFFST C G   P Q + IPPLA+AE+G +WVPI GSW DPVL ++ IFSAALD LL  K
Sbjct:   14 YNDEPGCGYEESQLNFALHVRMGDRRELEGVTPEYFSLLEDFMATVTQAVVEREQAAPMFHVFSEALYPCPSPENATFTEFPLWPVERDQVDLNVSLHRLFSLSNEKVSVCLRNAAEQGAPASRKGTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDRISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHIFSAALDALLKRK 248          
BLAST of mRNA_Ecto-sp13_S_contig864.20083.1 vs. uniprot
Match: A0A6H5JJ94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ94_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.950e-54
Identity = 99/141 (70.21%), Postives = 104/141 (73.76%), Query Frame = 0
Query:  428 DRIEECLAATTPRDCPEKQAGTFCTPKRAGIFHIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISFFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLSSRSIFSAALDTLLVAKIRR 568
            D+IEECLAATTP+DCPEKQAGTFCTPKRAGIF IR KSIVLH+GSDVQNEMSC+I+ADGVLM                                RSIPPL IAEKGHLWVPIEGSWHDPV SSRSIFSAALDTLLVAK RR
Sbjct:   20 DQIEECLAATTPQDCPEKQAGTFCTPKRAGIFRIRYKSIVLHMGSDVQNEMSCIIEADGVLM--------------------------------RSIPPLTIAEKGHLWVPIEGSWHDPVWSSRSIFSAALDTLLVAKSRR 128          
BLAST of mRNA_Ecto-sp13_S_contig864.20083.1 vs. uniprot
Match: A0A6H5JXM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM8_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.010e-52
Identity = 91/179 (50.84%), Postives = 112/179 (62.57%), Query Frame = 0
Query:  382 METVADEFRERGLPQPLFHVFSETLSPCPSTVTGLFDEFPTWPVELDRIEECLAATTPRDCPEKQAG-TFCTPKRAGIFHIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISFFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLSSRSIFSAALD 559
            M+ +A E    G   PLFH+FSET  PCPS   G+F EFP W V  D I EC +A  P DCPEKQAG  FC P   GIF +  + I+ +VG +V   +  MI AD V+MGCS FGQ+AG+L++GI  FST C G  T  Q +  P  AIAE G LWVP+EGSW DP L++  IF  A +
Sbjct:    1 MKVIAKEVHGLGQRTPLFHIFSETELPCPSLEDGVFPEFPEWAVAPDEIRECHSARPPDDCPEKQAGGDFCYPHHTGIFRVPGEPIIFNVGGNVVQSLMSMISADAVVMGCSAFGQLAGILSKGIKLFSTGCEGNMTWEQNKMAPLFAIAELGELWVPLEGSWADPTLTNVGIFRKAFE 179          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig864.20083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G5J9_ECTSI1.430e-17692.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5J8_ECTSI5.990e-14095.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRT1_ECTSI9.000e-9744.22Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus ... [more]
A0A6H5JW68_9PHAE1.260e-9551.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L814_9PHAE1.730e-6446.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ94_9PHAE1.950e-5470.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXM8_9PHAE1.010e-5250.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 567..568
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 84..568
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..64
NoneNo IPR availableTMHMMTMhelixcoord: 65..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig864contigEcto-sp13_S_contig864:10671..16705 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig864.20083.1mRNA_Ecto-sp13_S_contig864.20083.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig864 10671..16705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig864.20083.1 ID=prot_Ecto-sp13_S_contig864.20083.1|Name=mRNA_Ecto-sp13_S_contig864.20083.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=569bp
CVGPTCTTSQSSILVLEACLHRSIWDSLTALSTAVLHLVPHRQRVSCDGF
TSGCKAVLRRRTRMLMWGWTLLPGLLLVLTPFIEESGLAPVTGAPSGVEP
ADACADFAPGQYTGSGWTPEDCLHVWNGFNDTVWEQFHPRMPDADLWIDT
AEELRRAGSPCLVGSIPNGDGAGSTTIRHLATWIFSREMGCDWVTPDWGK
KFVGGRGGTAVMYCHRAGTAAEMDPSKTKEELKAMRRCVIVDWLSYFQFD
VPSVPSPVHEKLMVAKKRSFTQSILEMQNKLQQSGIEGQRWDRVVFSLTA
TLASQHLVNVGSWDERKRKIVREVLQEARSNFHRHPRPWYDENPRCHFED
DRFHFAVHIRMGDRRAFYDGSPQYFHNVELIMETVADEFRERGLPQPLFH
VFSETLSPCPSTVTGLFDEFPTWPVELDRIEECLAATTPRDCPEKQAGTF
CTPKRAGIFHIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGL
LTRGISFFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLSS
RSIFSAALDTLLVAKIRR*
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