prot_Ecto-sp13_S_contig864.20082.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig864.20082.1
Unique Nameprot_Ecto-sp13_S_contig864.20082.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length411
Homology
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Match: A0A6H5JK18_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK18_9PHAE)

HSP 1 Score: 689 bits (1779), Expect = 4.180e-239
Identity = 368/410 (89.76%), Postives = 380/410 (92.68%), Query Frame = 0
Query:    1 MSVSPPEEGSAXXXXXXXXXXXXXXXXXXXXSPCSPPPLEPVSRSRGGSSNEGEEAMQPWGCLGGDSPPAPLIQFPFEPSAASGGGGHANGGEGGGLFDLNVGAGIAPVEGXXXXXXXXXXXGGVEWVMQGGEVIAQVDNAEMPLVAEVRLNLHRNFAHFFQMSNSGLWACVATGDTPMMCHRVAFIPLGEAKASPPKSTSTRPAAMSPGDPGGSXXXXXTGDDEKDVFIHVLRSGSGGDAASLQPKVTARRMEAVECGGAVLSVSVTRDDRFIMVNVRPFMKGALDKLHRPEGRYTAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPKVR 410
            +SVS PEE +A XXXXXXXXXXXX       S CSP PLEPVSRSRGGSS EGEEAMQPWGCLGGDSPPAPLIQ+PFEPSAASG GGHANGGEGG LFDLNVG GIA V+ XXXXXXX    GGVEWVMQGGEVIAQVD+AEMPLVAEVRLNL RNFAHFFQMSNSGLWACVATGDTPMMCHRVAFIPL EA ASPPKSTSTRPAAMSPGDPGGS     +G+DEKDVFIHVLRSGSGGDAASLQPKVTARRMEAVECGGAVLS+S+TRDDRFIMVNVRPFMKGALDKL+RPEGR+TAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGP+VR
Sbjct:  642 LSVSLPEEAAAPXXXXXXXXXXXXTSFG---SSCSPTPLEPVSRSRGGSSIEGEEAMQPWGCLGGDSPPAPLIQYPFEPSAASGDGGHANGGEGGVLFDLNVGVGIAAVDDXXXXXXXENEEGGVEWVMQGGEVIAQVDDAEMPLVAEVRLNLRRNFAHFFQMSNSGLWACVATGDTPMMCHRVAFIPLMEATASPPKSTSTRPAAMSPGDPGGSDDDDGSGNDEKDVFIHVLRSGSGGDAASLQPKVTARRMEAVECGGAVLSLSLTRDDRFIMVNVRPFMKGALDKLYRPEGRHTAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPRVR 1048          
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Match: D7G5J6_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J6_ECTSI)

HSP 1 Score: 588 bits (1517), Expect = 2.370e-200
Identity = 342/417 (82.01%), Postives = 352/417 (84.41%), Query Frame = 0
Query:    1 MSVSPPEEGSAXXXXXXXXXXXXXXXXXXXXSPCSPPPLEPVSRSRGGSSNEGEEAMQPWGCLGGDSPPAPLIQFPFEPSAASGGGGHANGGEG-GGLFDLNVGAGIAPVEGXXXXXXXXXXX---GGVEWVMQGGEVIAQVDNAEMPLVAEVRLNLHRNFAHFFQMSNSGLWACVATGDTPMMCHRVAFIPLGEAKASPPKSTSTRPAAMSPGDPGGSXXXXXTGDD---EKDVFIHVLRSGSGGDAASLQPKVTARRMEAVECGGAVLSVSVTRDDRFIMVNVRPFMKGALDKLHRPEGRYTAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPKVR 410
            MSVS PEE +      XXXXXXXXXXX    SP SPPPLEPVS S GGSSNEGEE MQPWGCLGGDS P PLIQ+PFEPSA+SG           GGLFDLNVG GIA VEGXXXXXXXXXXX   GGVEWVMQGGEVIAQVD+              +    FF  SNSG WACVATGDTPMMCHRVAFIPLGEA+ASPPKSTSTRPAA+SPGDPG S XXXX       EKDVFI VLRSGSGGDAASLQPKVTARRMEAVECGGAVLS+SVTRDDRFIMVNVRPFMKGALDKLHRPEGR+TAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGP+VR
Sbjct:  578 MSVSLPEEEAVAPAGAXXXXXXXXXXXPSFGSPFSPPPLEPVS-SHGGSSNEGEETMQPWGCLGGDSHPTPLIQYPFEPSASSGXXXXXXXXXXXGGLFDLNVGVGIAAVEGXXXXXXXXXXXDEEGGVEWVMQGGEVIAQVDDGGDAAGRRGSAQPSQELRAFFP-SNSGSWACVATGDTPMMCHRVAFIPLGEARASPPKSTSTRPAAISPGDPGVSDXXXXXXXXXXXEKDVFIRVLRSGSGGDAASLQPKVTARRMEAVECGGAVLSLSVTRDDRFIMVNVRPFMKGALDKLHRPEGRHTAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPRVR 992          
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Match: A0A812MSZ5_9DINO (WDR26 protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812MSZ5_9DINO)

HSP 1 Score: 101 bits (252), Expect = 1.710e-20
Identity = 71/199 (35.68%), Postives = 99/199 (49.75%), Query Frame = 0
Query:  239 GDAASLQPKVTARRMEAVECGG-AVLSVSVTRDDRFIMVNVRPF---------------------MKGAL--DKLHRPEGRYTAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIW---GPKVR 410
            G+AAS  P V   +++    G   VLS        FI++N RP+                       GA   D L RP     AP++S ++EL + D  T  +     GH AFTTK+ PFLI   + +     D++ SG E+HRV++WH RH  L+  L GH + VN+VSWN +  G+++S SDD   IIW   G K R
Sbjct:  117 GEAASALPAVYDVKVKVYSMGERVVLSAKWNEAGDFILLNTRPYAHAVSGSQKTGGQSEASQASLQAGASFEDLLLRP-----APDLSTKMELLLLDARTLDVVSVFDGHFAFTTKESPFLIFTEEWSDS---DFLASGGEDHRVYIWHRRHGRLIRRLCGHAEPVNAVSWNGR--GLLASASDDNGIIIWAAAGAKER 305          
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Match: A0A0G4GZR2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GZR2_VITBC)

HSP 1 Score: 103 bits (257), Expect = 5.010e-20
Identity = 70/249 (28.11%), Postives = 102/249 (40.96%), Query Frame = 0
Query:  251 RRMEAVECGGAVLSVSVTRDDRFIMVNVRPFMKGA------LDKLHRPEGRYTAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLI------------------------------------------------------------------------MAAQSAADPFG------------DYVCSGSEEHRVFVWHLRHRLLLGVL-KGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPK 408
            R +  ++    VL++ VT+D +F++VN RPF          LD+L     R   P++ + +E+ ++ + T      L GH AFTTK CPFLI                                                                           + A  P G            D+V SGSE+HRV+VWH+RH+ L+ +L  GH DVVNSVSWN   PG+++SC D+G   +W P+
Sbjct: 1016 RPLVVIDARAGVLTLRVTQDGQFLLVNCRPFEGSQYLRLRLLDRLSAV--RQPKPDLKSAMEVHIYHIPTLTKVAVLKGHVAFTTKACPFLINLMEGGPGPDLPFPPIHHTRDTHDHPAXXXXXXXXXXXXXXXXXXXXXXXXXRDADAMMDQDEPSDGQEPSSSCVEGARRPAGVCGQQQPPWRCYDFVASGSEDHRVYVWHMRHQRLVSILANGHTDVVNSVSWNSGVPGLLASCGDEGHVCLWSPR 1262          
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Match: A0A812H3E1_9DINO (Wdr26 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812H3E1_9DINO)

HSP 1 Score: 102 bits (255), Expect = 9.210e-20
Identity = 71/197 (36.04%), Postives = 99/197 (50.25%), Query Frame = 0
Query:  239 GDAASLQPKVTARRMEAVECGG-AVLSVSVTRDDRFIMVNVRPFMKGAL---------DKLHRPE----GRYT--------APEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIW---GPKVR 410
            G+A S  P V    ++    G   VLS        FI++N RP+   A          D  H  +    G  T        AP++S ++EL + D  T  +     GH AFTTK+ PFLI   + +     D++ SG E+HRV+VWH RH  L+  L GH + VN+VSWN +  G+++S SDD + IIW   G KVR
Sbjct: 1185 GEAGSALPAVYDVGVKVYSMGERVVLSAKWNEAGDFILLNTRPYAHAASGSNKNGGHGDASHTSQAPLQGSATFEDLLLRPAPDLSTKMELLLLDARTLDILSVFDGHFAFTTKESPFLIFTEEWSDS---DFLASGGEDHRVYVWHRRHGRLIRRLCGHAEPVNAVSWNGQ--GLLASASDDNSIIIWAAAGAKVR 1376          
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Match: A0A813B4T2_SYMMI (Wdr26 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813B4T2_SYMMI)

HSP 1 Score: 101 bits (252), Expect = 2.010e-19
Identity = 71/199 (35.68%), Postives = 99/199 (49.75%), Query Frame = 0
Query:  239 GDAASLQPKVTARRMEAVECGG-AVLSVSVTRDDRFIMVNVRPF---------------------MKGAL--DKLHRPEGRYTAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIW---GPKVR 410
            G+AAS  P V   +++    G   VLS        FI++N RP+                       GA   D L RP     AP++S ++EL + D  T  +     GH AFTTK+ PFLI   + +     D++ SG E+HRV++WH RH  L+  L GH + VN+VSWN +  G+++S SDD   IIW   G K R
Sbjct:  830 GEAASALPAVYDVKVKVYSMGERVVLSAKWNEAGDFILLNTRPYAHAVSGSQKTGGQGEASQASLQAGASFEDLLLRP-----APDLSTKMELLLLDARTLDVVSVFDGHFAFTTKESPFLIFTEEWSDS---DFLASGGEDHRVYIWHRRHGRLIRRLCGHAEPVNAVSWNGR--GLLASASDDNGIIIWAAAGAKER 1018          
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Match: A0A813CRT9_9DINO (Wdr26 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CRT9_9DINO)

HSP 1 Score: 101 bits (252), Expect = 2.110e-19
Identity = 71/199 (35.68%), Postives = 99/199 (49.75%), Query Frame = 0
Query:  239 GDAASLQPKVTARRMEAVECGG-AVLSVSVTRDDRFIMVNVRPF---------------------MKGAL--DKLHRPEGRYTAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIW---GPKVR 410
            G+AAS  P V   +++    G   VLS        FI++N RP+                       GA   D L RP     AP++S ++EL + D  T  +     GH AFTTK+ PFLI   + +     D++ SG E+HRV++WH RH  L+  L GH + VN+VSWN +  G+++S SDD   IIW   G K R
Sbjct:  976 GEAASALPAVYDVKVKVYSMGERVVLSAKWNEAGDFILLNTRPYAHAVSGSQKTGGQGEASQASLQAGASFEDLLLRP-----APDLSTKMELLLLDARTLDVVSVFDGHFAFTTKESPFLIFTEEWSDS---DFLASGGEDHRVYIWHRRHGRLIRRLCGHAEPVNAVSWNGR--GLLASASDDNGIIIWAAAGAKER 1164          
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Match: A0A0B6ZSF1_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZSF1_9EUPU)

HSP 1 Score: 92.0 bits (227), Expect = 5.560e-19
Identity = 48/103 (46.60%), Postives = 60/103 (58.25%), Query Frame = 0
Query:  309 VWDVATKKLAFKLGGH-HAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPKVR 410
            +WD+  K L  K  G   AF      F I +     +   DYV SGSE+H+VF+WH R    + VL+GH   VN V WNPK P M++S SDDGTA IWGPK +
Sbjct:    8 LWDLKDKVLLRKFHGQTQAF------FTIYSCFGGLNQ--DYVASGSEDHKVFIWHKRRETPVAVLEGHRQTVNCVHWNPKEPSMLASVSDDGTARIWGPKDK 102          
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Match: A0A813IYS7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IYS7_POLGL)

HSP 1 Score: 95.9 bits (237), Expect = 7.730e-19
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 0
Query:  298 APEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIW 405
            AP++S  +EL + D  +  +     GH AFTTK+ PFLI   + A     D++ SG E+HRV+VWH RHR L+  L GH + VN+VSWN    G+++S SDD   IIW
Sbjct:  156 APDLSTTMELLLLDANSLDIIGLFDGHFAFTTKESPFLIFTDEWANS---DFLASGGEDHRVYVWHRRHRRLIRRLCGHTEPVNAVSWNGN--GLLASASDDKQIIIW 258          
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Match: A0A7S1KJU7_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KJU7_9ALVE)

HSP 1 Score: 87.4 bits (215), Expect = 6.990e-17
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 0
Query:  348 DYVCSGSEEHRVFVWHLRHRLLLGVL-KGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPK 408
            D+V SGSE+HRV+VWH+RH+ L+ +L  GH DVVNSVSWN   PG+++SC D+G   +W P+
Sbjct:   65 DFVASGSEDHRVYVWHMRHQRLVSILANGHTDVVNSVSWNSGVPGLLASCGDEGHVCLWSPR 126          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig864.20082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK18_9PHAE4.180e-23989.76F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G5J6_ECTSI2.370e-20082.01F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A812MSZ5_9DINO1.710e-2035.68WDR26 protein (Fragment) n=1 Tax=Symbiodinium necr... [more]
A0A0G4GZR2_VITBC5.010e-2028.11Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A812H3E1_9DINO9.210e-2036.04Wdr26 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A813B4T2_SYMMI2.010e-1935.68Wdr26 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A813CRT9_9DINO2.110e-1935.68Wdr26 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A0B6ZSF1_9EUPU5.560e-1946.60Uncharacterized protein (Fragment) n=1 Tax=Arion v... [more]
A0A813IYS7_POLGL7.730e-1945.37Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S1KJU7_9ALVE6.990e-1756.45Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 314..363
e-value: 55.0
score: 6.0
coord: 366..406
e-value: 1.3E-6
score: 38.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 370..405
e-value: 1.8E-4
score: 22.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 373..410
score: 11.411
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 231..408
e-value: 2.6E-18
score: 68.3
IPR042508F-box/WD repeat-containing protein 5PANTHERPTHR20995FAMILY NOT NAMEDcoord: 256..406
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..410
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 344..410
score: 13.079
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 308..406

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig864contigEcto-sp13_S_contig864:1129..6004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig864.20082.1mRNA_Ecto-sp13_S_contig864.20082.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig864 1092..8329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig864.20082.1 ID=prot_Ecto-sp13_S_contig864.20082.1|Name=mRNA_Ecto-sp13_S_contig864.20082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=411bp
MSVSPPEEGSAAPAGAAAAAAAAAAAATSSGSPCSPPPLEPVSRSRGGSS
NEGEEAMQPWGCLGGDSPPAPLIQFPFEPSAASGGGGHANGGEGGGLFDL
NVGAGIAPVEGGGGGGGGEDEEGGVEWVMQGGEVIAQVDNAEMPLVAEVR
LNLHRNFAHFFQMSNSGLWACVATGDTPMMCHRVAFIPLGEAKASPPKST
STRPAAMSPGDPGGSDDDDDTGDDEKDVFIHVLRSGSGGDAASLQPKVTA
RRMEAVECGGAVLSVSVTRDDRFIMVNVRPFMKGALDKLHRPEGRYTAPE
ISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYV
CSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDG
TAIIWGPKVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR042508FBXW5
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf