prot_Ecto-sp13_S_contig8634.20075.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8634.20075.1
Unique Nameprot_Ecto-sp13_S_contig8634.20075.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length182
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8634.20075.1 vs. uniprot
Match: D7FQN3_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN3_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 4.700e-48
Identity = 82/114 (71.93%), Postives = 91/114 (79.82%), Query Frame = 0 
Query:   19 MGGERQRHNVRAINRTEGHCEYASISGGGSPDDCDEHGHAVNPIVDETHNYGWTDYRSISWWKFPARPLLKPSARAKMTIGTLHVKVVEARGLMSRDFAGKSDPFAELELTGRY 132
            MG  +  H+  A+N   G  EYA I+GG + D CDE G+AVNPIVDE  NYGW DYRSIS WKFPA PLL+PS RAKMTIGTLH KVVEARGL+SRDFAG+SDPFAELELTGRY
Sbjct:    1 MGHVQPGHDGTAMNHAGGQHEYACIAGGENHDGCDERGNAVNPIVDEADNYGWMDYRSISGWKFPAWPLLQPSTRAKMTIGTLHAKVVEARGLISRDFAGRSDPFAELELTGRY 114
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BLAST of mRNA_Ecto-sp13_S_contig8634.20075.1 vs. uniprot
Match: D7G4V0_ECTSI (Protein kinase C, beta 1, like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V0_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 5.150e-16
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 0 
Query:   69 YGWTDYRSISWWKFPARPLLKPSARAKMTIGTLHVKVVEARGLMSRD-FAGKSDPFAELELTGRY 132
            YG  DYRSI+ W FPAR LLK   +A ++IG LHVKVVEARGLM+RD   GKSDP+  L LTGRY
Sbjct:   38 YGVKDYRSINPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYVNLALTGRY 102
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BLAST of mRNA_Ecto-sp13_S_contig8634.20075.1 vs. uniprot
Match: A0A6H5JW30_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW30_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 5.850e-16
Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 0 
Query:   53 DEHGHA-VNPIVDETHNYGWTDYRSISWWKFPARPLLKPSARAKMTIGTLHVKVVEARGLMSRD-FAGKSDPFAELELTGRY 132
            D HG +  + + +E   YG  DYRSI  W FPAR LLK   +A ++IG LHVKVVEARGLM+RD   GKSDP+  L LTGRY
Sbjct:   23 DTHGRSNADELYEE--RYGVKDYRSIKPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYVNLALTGRY 102
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8634.20075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQN3_ECTSI4.700e-4871.93C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
D7G4V0_ECTSI5.150e-1666.15Protein kinase C, beta 1, like n=1 Tax=Ectocarpus ... [more]
A0A6H5JW30_9PHAE5.850e-1657.32C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..181
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 90..130
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 87..137
e-value: 4.1E-7
score: 31.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8634contigEcto-sp13_S_contig8634:453..1738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8634.20075.1mRNA_Ecto-sp13_S_contig8634.20075.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8634 366..4218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8634.20075.1 ID=prot_Ecto-sp13_S_contig8634.20075.1|Name=mRNA_Ecto-sp13_S_contig8634.20075.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MFCGQEQRKSRMAHVGSFMGGERQRHNVRAINRTEGHCEYASISGGGSPD
DCDEHGHAVNPIVDETHNYGWTDYRSISWWKFPARPLLKPSARAKMTIGT
LHVKVVEARGLMSRDFAGKSDPFAELELTGRYDGLPLCSFPAQGYAQLLV
MPLIEGLLIAWSCKSVMYGTKVHECVVSSKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf