prot_Ecto-sp13_S_contig8633.20073.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8633.20073.1
Unique Nameprot_Ecto-sp13_S_contig8633.20073.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length631
Homology
BLAST of mRNA_Ecto-sp13_S_contig8633.20073.1 vs. uniprot
Match: D8LSM0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM0_ECTSI)

HSP 1 Score: 565 bits (1455), Expect = 2.460e-177
Identity = 439/650 (67.54%), Postives = 453/650 (69.69%), Query Frame = 0
Query:    1 VIEFPRGNNNVEGCNALVEDVPLGARMLAAMANANR-----LRVWNDPIKRKEKLEVSLSLKQSVWFTKEGIVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------VVYTPANSVSASIVYQGRNRHVYAVASGIIQLPHGNAISEGVTVFPVGHHWVCLALLCAGTPISELPSHMHADLDKEQMDKAIEFANTFWSTSSTQERWGKVETEGLRAMLREIFDDRALAEGGGGDR---VSKKDAKDGLTDGKDGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGYGAAPGAAATAGMVAEFQGGFDSASDYRGSPLAILREDPGLWKMGGREPARVREAAAGVAAVATAAVEAVEAPLNGAKKKMEMSLGLGRALMEWSESLSEAGRDMAALMGLQAVVMCILGVHRRNVLAGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAGQQQTTAGVGEIREDAPTPEGGMAAAAV-DGAERGRSDDRFVYGDLARLEAEIFAATGVEDALLHLCPGGHGGGASGAGKGGVGAAAQKSSVLRGVPWLGFLDENGAGR-AVGDVEGRLLVWRPPAVVAEALDADLDADPTGWLSDFGVGGID 624
            VIEFPRGNNNVEGCN+LVEDVPLGARMLAAMANANR     LRVWNDPIKRKEKLEVSLSLKQSVWFTKEGI+PSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                VVYTPANSVSASIVYQGRNRHVYAVASGIIQLPHGNAISEGVTVFPVGHHWVCLALLCAGTPISELPSHMHADLD +QMDKAIEF+ TFWSTSSTQERWGK            IFDDRALAEGG       +SKKDAKDGL DGKD V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +   AAT GMVAEFQGGFDSASDYRGSPLAILREDPGLWK+G REPAR                                                                                                                         QT  GVGE R+DA  PE  +AAAA  DGA RGR  D FVYGDLARLEAEIF ATGVEDALLHLCPGG+GGGASGAGKGGV AAA++SSVLRGVPWL FLD++G G  AVGDVEGRLLVWRPPAVVAEALDADLDADPTGWLS FG GGID
Sbjct: 1659 VIEFPRGNNNVEGCNSLVEDVPLGARMLAAMANANRAGGRKLRVWNDPIKRKEKLEVSLSLKQSVWFTKEGILPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVYTPANSVSASIVYQGRNRHVYAVASGIIQLPHGNAISEGVTVFPVGHHWVCLALLCAGTPISELPSHMHADLDNKQMDKAIEFSKTFWSTSSTQERWGK------------IFDDRALAEGGXXXXXXXLSKKDAKDGLADGKDEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---AATPGMVAEFQGGFDSASDYRGSPLAILREDPGLWKLGEREPAR-------------------------------------------------------------------------------------------------------------------------QTATGVGESRDDATPPEAVVAAAAAGDGAARGRPYDGFVYGDLARLEAEIFTATGVEDALLHLCPGGYGGGASGAGKGGVDAAAKRSSVLRGVPWLSFLDDDGDGDGAVGDVEGRLLVWRPPAVVAEALDADLDADPTGWLSGFGGGGID 2172          
BLAST of mRNA_Ecto-sp13_S_contig8633.20073.1 vs. uniprot
Match: A0A6H5KJQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ6_9PHAE)

HSP 1 Score: 460 bits (1183), Expect = 6.540e-146
Identity = 318/403 (78.91%), Postives = 328/403 (81.39%), Query Frame = 0
Query:  233 EIFDDRALAEGGGGDR----VSKKDAKDGLTDGKDGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGYGAAPGAAATAGMVAEFQGGFDSASDYRGSPLAILREDPGLWKMGGREPARVREAAAGV-AAVATAAVEAVEAPLNGAKKK-MEMSLGLGRALMEWSESLSEAGRDMAALMGLQAVVMCILGVHRRNVLAGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAGQQQTTAGVGEIREDAPTPEGGMAAAAVDGAERGRSDDRFVYGDLARLEAEIFAATGVEDALLHLCPGGHGGGASGAGKGGVGAAAQKSSVLRGVPWLGFLDENGAGRAVGDVEGRLLVWRPPAVVAEALDADLDADPTGWLSDFGVGGIDGGGGD 629
            EIFDDRALAEGG        VSKKDAKDGL DGKD VD XXXXXXXXXXXX                    XXX   GA  G+  TAGMVAEFQGGFDSASDYRGSPLAILREDPGLWK+G REPARVREAAA V AA A AAVEAVEAPLNGAKKK M+MS  LGRALMEWSESLSEAGRDMAAL GLQAVVMCILGVHRRNVLAG E       XXXXXXXXXXXXXXXXXXXXXXXXXXXX         AGVGE R+DA TPEGG+AAAA D AERGR DD FVYGDLARLEAEIF+ATGVEDALLHLCPGGHGGGASGAG+GGVGAAA++SSVLRGVPWL FLDE+G G AVGDVEGRLLVWRPPAVVAEALDADLDADPTGWLS FG GGIDGGGGD
Sbjct:    6 EIFDDRALAEGGXXXXXXXXVSKKDAKDGLADGKDEVDDXXXXXXXXXXXXKDEEEHGTGGGNVSDSGRSGXXXXXXGA-HGSVGTAGMVAEFQGGFDSASDYRGSPLAILREDPGLWKLGEREPARVREAAADVGAAAAAAAVEAVEAPLNGAKKKKMKMSPRLGRALMEWSESLSEAGRDMAALTGLQAVVMCILGVHRRNVLAGVEETTAGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXAGVGETRDDAATPEGGVAAAAGDWAERGRPDDGFVYGDLARLEAEIFSATGVEDALLHLCPGGHGGGASGAGRGGVGAAAKRSSVLRGVPWLSFLDEDGNGGAVGDVEGRLLVWRPPAVVAEALDADLDADPTGWLSSFGSGGIDGGGGD 406          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8633.20073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSM0_ECTSI2.460e-17767.54Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KJQ6_9PHAE6.540e-14678.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8633contigEcto-sp13_S_contig8633:378..5701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8633.20073.1mRNA_Ecto-sp13_S_contig8633.20073.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8633 378..5702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8633.20073.1 ID=prot_Ecto-sp13_S_contig8633.20073.1|Name=mRNA_Ecto-sp13_S_contig8633.20073.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=631bp
VIEFPRGNNNVEGCNALVEDVPLGARMLAAMANANRLRVWNDPIKRKEKL
EVSLSLKQSVWFTKEGIVPSSSSSSSSSASPSATSSSSAETGGSGSRPQT
GASSSSSSAAAGPPKKERRRVVYTPANSVSASIVYQGRNRHVYAVASGII
QLPHGNAISEGVTVFPVGHHWVCLALLCAGTPISELPSHMHADLDKEQMD
KAIEFANTFWSTSSTQERWGKVETEGLRAMLREIFDDRALAEGGGGDRVS
KKDAKDGLTDGKDGVDDDDDDDEDEDEEEHGTGGGNGSDSGSDSGSDRGS
SDYGYGAAPGAAATAGMVAEFQGGFDSASDYRGSPLAILREDPGLWKMGG
REPARVREAAAGVAAVATAAVEAVEAPLNGAKKKMEMSLGLGRALMEWSE
SLSEAGRDMAALMGLQAVVMCILGVHRRNVLAGAEETTTAAAAAAIVGEA
SSSPAGEEVIAAAGDNGGVALSAGQQQTTAGVGEIREDAPTPEGGMAAAA
VDGAERGRSDDRFVYGDLARLEAEIFAATGVEDALLHLCPGGHGGGASGA
GKGGVGAAAQKSSVLRGVPWLGFLDENGAGRAVGDVEGRLLVWRPPAVVA
EALDADLDADPTGWLSDFGVGGIDGGGGDGD
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