prot_Ecto-sp13_S_contig861.20039.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig861.20039.1
Unique Nameprot_Ecto-sp13_S_contig861.20039.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length672
Homology
BLAST of mRNA_Ecto-sp13_S_contig861.20039.1 vs. uniprot
Match: D8LQX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX2_ECTSI)

HSP 1 Score: 881 bits (2276), Expect = 1.240e-308
Identity = 519/675 (76.89%), Postives = 542/675 (80.30%), Query Frame = 0
Query:    1 VVLPVRNAVLGLRPVSIARGPQESGVDKEEAAAGSHARSSINTSSSDNDRNDCIIRNSTDSGSWRLLRGKVSGAFPAADRRGRVGTAGNTPLVLRLRLSVSLSLKPPEELACPPEPRNRR------GRYKEAVGTAAAPYATVGAERESVPPHGGAVFDETGSRRAGRPEGLGLVDMPTRSAGRVQGKGDRRTTRTKRGGGDANRGG-NRDKIAYDHGAALLRRRVKRQECIARENERMERRLKVIREAAPNPREPRCYKRVGRAPCVPRGGDAAGSASVGVTEQPLQCRRRRQRSVGRVAGGLHGDAPPHHAGVRSTVESGNNRXXXXHPVAASCWDSTTPLEXXXXXXXXGKKETAGWQKLNDEREALASAVEAAAXXXXXVRARVEALRAKTLWTEANARRSSLTVASLENGAHGRCASSRTTGKEASAVVAADSSGASVVFERRTFDTDGEGGLVEEGLAAELRRQEELYKALAEARRRAVAAGEAARLAREAHLKELDELRSRLTEAEARQTRHQWRRENETVTTVPPPIRAAATVPLRRRESPRGDECSPTRAAGAHAAGAASAGDDARLALDGVKEDRGGXXXXGTLPKDALERAQDLALALRVEVETLRLEEALGAGKRADVNVAGVGRAPSDAQEEVARLKARLKNKTRRLEGAIFDRDAIRAEYQ 668
            VVLPVRNAVLGL+PV IA GPQ+SGVDKEEAA G+HAR SIN SSSD+D ND IIRN+TDSGSWRLLRG VSGAF AADR GRV TAGN PLVL+LRLSVS SLKPPE+LACP EPRNR       G  KEAVGTAAAPYATVGAERE VPPHGG VFDETG+RRAG+P GLGL DMPTRSAGR +GKGDRRTTR KRGGG AN GG NRD  A+DHGAALLRR+VKRQECIARENERMERRLKVIREA PN REPRCY+RVGRAPCVPRGG AAG A VG TEQP       QRS G V GGL G+APPH AGVRSTVESG+NR    HPV A CWDSTTP          GKKETAGW++L DEREALASAVEAAA XXXXVRARVEALRAKTLWTEANARRSSLTVASLENGAHGRCASSRTTGKE SAVVAA+SSGA V F+RRT D D EGGLVEEGLAAELRRQEELY ALAEARRR VAAGEAARLAREA LKELDELRSRLTEAEAR TRHQWRRENETVT                                             RLALDGV+     XXXX TLPKDALERA+DLAL+LRVEVETLRLEEALGAG  ADVNVAGVGRAPSDAQ+EVARLKARLKNKTRRLEGAIFDRDAIRAEYQ
Sbjct:  427 VVLPVRNAVLGLQPVDIAPGPQKSGVDKEEAATGTHARPSINISSSDDDNNDGIIRNNTDSGSWRLLRGDVSGAFRAADRLGRVETAGNAPLVLQLRLSVSFSLKPPEDLACPTEPRNRAAAQTMGGYPKEAVGTAAAPYATVGAEREPVPPHGGVVFDETGARRAGKPGGLGLADMPTRSAGRARGKGDRRTTRAKRGGGHANSGGGNRDWRAHDHGAALLRRKVKRQECIARENERMERRLKVIREAVPNTREPRCYERVGRAPCVPRGGGAAGGAGVGFTEQPRHRXXXXQRSDGTVVGGLQGEAPPHAAGVRSTVESGSNRRRVGHPVVAGCWDSTTPSAGGGEAAAAGKKETAGWRELYDEREALASAVEAAAAXXXXVRARVEALRAKTLWTEANARRSSLTVASLENGAHGRCASSRTTGKEVSAVVAAESSGAVVAFDRRTLDIDDEGGLVEEGLAAELRRQEELYTALAEARRRVVAAGEAARLAREADLKELDELRSRLTEAEARHTRHQWRRENETVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLALDGVEXXXXXXXXXXTLPKDALERAKDLALSLRVEVETLRLEEALGAGSGADVNVAGVGRAPSDAQDEVARLKARLKNKTRRLEGAIFDRDAIRAEYQ 1101          
BLAST of mRNA_Ecto-sp13_S_contig861.20039.1 vs. uniprot
Match: A0A6H5KVJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ5_9PHAE)

HSP 1 Score: 621 bits (1601), Expect = 1.920e-215
Identity = 383/520 (73.65%), Postives = 394/520 (75.77%), Query Frame = 0
Query:  121 GRYKEAVGTAAAPYATVGAERESVPPHGGAVFDETGSRRAGRPEGLGLVDMPTRSAGRVQGKGDRRTTRTKRGGGDANRGGNRDKIAYDHGAALLRRRVKRQECIARENERMERRLKVIREAAPNPREPRCYKRVGRAPCVPRGGDAAGSASVGVTEQPLQCRRRRQRSVGRVAGGLHGDAPPHHAGVRSTVESGNNRXXXXHPVAASCWDSTTPLEXXXXXXXXGKKETAGWQKLNDEREALASAVEAAAXXXXXVRARVEALRAKTLWTEANARRSSLTVASLENGAHGRCASSRTTGKEASAVVAADSSGASVVFERRTFDTDGEGGLVEEGLAAELRRQEELYKALAEARRRAVAAGEAARLAREAHLKELDELRSRLTEAEARQTRHQWRRENETVTTVPPPIRAAATVPLRRRESPRGDECSPTRAAGAHAAGAASAGDDARLALDGVKEDRGGXXXX-GTLPKDALERAQDLALALRVEVETLRLEEALGAGKRADVNVAGVGRAPSDAQEEV 639
            G  KEAVGTAAAPYATVGAERE VPPHGG VFDETGSRRAGRP GL   D+P RSAGR QG G+RRTTRT                           RVKRQECIARENERMERRLKVIREAAPNPREPRCYKRVGRAPCVPRGG A                    RS G VA GLHGDAPPH AGVRSTVESGNNR    H VAA CWDSTTP          GK  TAGW++L DEREALASAVEAAA XXXXVRARVEALRAKTLWTEANARRSSL+VASLENGAHGRCASSRTTGKE SAV  A+SSGA VVF+RRT D DG+GGLVEEGLAAELRRQEELYKALAE+RRR VAAGEAARLAREA LKELDELRSRLTEAEARQTRHQWRRENETVTT                 SPR DE SPTRAAG            ARLALDGVKEDRGGXXXX G LPKDALERAQDLAL+LRVEVETLRLEEALGAG  ADVNVAG+GRAPSDAQEEV
Sbjct:    3 GHPKEAVGTAAAPYATVGAEREPVPPHGGVVFDETGSRRAGRPGGLVPADIPIRSAGRAQGNGNRRTTRTXXXXXXXXXXXXXXXXXXXXXXXXXXXRVKRQECIARENERMERRLKVIREAAPNPREPRCYKRVGRAPCVPRGGGAXXXXXXXXXXXXXXXXXXXXRSDGPVAEGLHGDAPPHAAGVRSTVESGNNRRRGGHQVAAGCWDSTTPSAGSGEAAAAGKV-TAGWRELYDEREALASAVEAAAAXXXXVRARVEALRAKTLWTEANARRSSLSVASLENGAHGRCASSRTTGKEVSAVETANSSGAGVVFDRRTLDIDGDGGLVEEGLAAELRRQEELYKALAESRRRTVAAGEAARLAREADLKELDELRSRLTEAEARQTRHQWRRENETVTTXXXXXXXXXXXXXXXXXSPRDDERSPTRAAGXXXXXXXXXXXAARLALDGVKEDRGGXXXXAGALPKDALERAQDLALSLRVEVETLRLEEALGAGTGADVNVAGLGRAPSDAQEEV 521          
BLAST of mRNA_Ecto-sp13_S_contig861.20039.1 vs. uniprot
Match: D8LQW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW9_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 5.250e-21
Identity = 53/58 (91.38%), Postives = 54/58 (93.10%), Query Frame = 0
Query:  614 ALGAGKRADVNVAGVGRAPSDAQEEVARLKARLKNKTRRLEGAIFDRDAIRAEYQVRG 671
            ALGA   ADVNVAGVGRAPSDAQ+EVARLKARLKNKTRRLEGAIFDRDAIRAEYQV G
Sbjct:   70 ALGAESGADVNVAGVGRAPSDAQDEVARLKARLKNKTRRLEGAIFDRDAIRAEYQVLG 127          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig861.20039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQX2_ECTSI1.240e-30876.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVJ5_9PHAE1.920e-21573.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQW9_ECTSI5.250e-2191.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 488..515
NoneNo IPR availableCOILSCoilCoilcoord: 367..387
NoneNo IPR availableCOILSCoilCoilcoord: 592..612
NoneNo IPR availableCOILSCoilCoilcoord: 456..476

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig861contigEcto-sp13_S_contig861:1210..5045 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig861.20039.1mRNA_Ecto-sp13_S_contig861.20039.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig861 1210..5045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig861.20039.1 ID=prot_Ecto-sp13_S_contig861.20039.1|Name=mRNA_Ecto-sp13_S_contig861.20039.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=672bp
VVLPVRNAVLGLRPVSIARGPQESGVDKEEAAAGSHARSSINTSSSDNDR
NDCIIRNSTDSGSWRLLRGKVSGAFPAADRRGRVGTAGNTPLVLRLRLSV
SLSLKPPEELACPPEPRNRRGRYKEAVGTAAAPYATVGAERESVPPHGGA
VFDETGSRRAGRPEGLGLVDMPTRSAGRVQGKGDRRTTRTKRGGGDANRG
GNRDKIAYDHGAALLRRRVKRQECIARENERMERRLKVIREAAPNPREPR
CYKRVGRAPCVPRGGDAAGSASVGVTEQPLQCRRRRQRSVGRVAGGLHGD
APPHHAGVRSTVESGNNRRRGGHPVAASCWDSTTPLEGGGEAAAAGKKET
AGWQKLNDEREALASAVEAAAAEAAAVRARVEALRAKTLWTEANARRSSL
TVASLENGAHGRCASSRTTGKEASAVVAADSSGASVVFERRTFDTDGEGG
LVEEGLAAELRRQEELYKALAEARRRAVAAGEAARLAREAHLKELDELRS
RLTEAEARQTRHQWRRENETVTTVPPPIRAAATVPLRRRESPRGDECSPT
RAAGAHAAGAASAGDDARLALDGVKEDRGGGGGGGTLPKDALERAQDLAL
ALRVEVETLRLEEALGAGKRADVNVAGVGRAPSDAQEEVARLKARLKNKT
RRLEGAIFDRDAIRAEYQVRG*
back to top