prot_Ecto-sp13_S_contig8609.20036.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8609.20036.1
Unique Nameprot_Ecto-sp13_S_contig8609.20036.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length120
Homology
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 2.200e-40
Identity = 81/119 (68.07%), Postives = 90/119 (75.63%), Query Frame = 0
Query:    1 LGSTFFGVQYSFQCFCGPSTADYAKHGSLTSDNCEYLCEAYPEEFCGGFATMEVFTIEDPPPTEAPAPNPWVDNSTTPAPGTTPSPTTTTIGPVLVGPSTAPTTPAPLDAGATGYLGCF 119
            LGSTFFGVQ+SFQCFCGPSTADY KHGSL+SDNCEYLC+A P+ FCGGF+T+EVFTI DP PTEAPAP P V N +T AP                  STAPTTPAP++AGA GYLGCF
Sbjct:  472 LGSTFFGVQFSFQCFCGPSTADYDKHGSLSSDNCEYLCDANPDFFCGGFSTIEVFTIGDPTPTEAPAPTPLV-NPSTQAPXXXXXXXXXXXXXXXX--STAPTTPAPVNAGAAGYLGCF 587          
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.800e-37
Identity = 81/120 (67.50%), Postives = 87/120 (72.50%), Query Frame = 0
Query:    1 LGSTFFGVQYSFQCFCGPSTADYAKHGSLTSDNCEYLCEAYPEEFCGGFATMEVFTIEDPPPTEAPAPNPWVDNSTTPAPGTTPSPTTTTIGPVLVGPSTAPTTPAPLDAGATGYLGCFA 120
            LGSTFFGVQYSFQ                          AYP+EFCGGF+TMEVFTIEDP PTEAPAP P +++STT APG TPSPTTTT+GPVLVGPSTAPTTPAPLDAG  GYLGCFA
Sbjct:  539 LGSTFFGVQYSFQ--------------------------AYPDEFCGGFSTMEVFTIEDPLPTEAPAPTPLMNHSTT-APGATPSPTTTTVGPVLVGPSTAPTTPAPLDAGVAGYLGCFA 631          
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Match: A0A6H5JZZ1_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ1_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 7.120e-29
Identity = 62/118 (52.54%), Postives = 74/118 (62.71%), Query Frame = 0
Query:    2 GSTFFGVQYSFQCFCGPSTADYAKHGSLTSDNCEYLCEAYPEEFCGGFATMEVFTIEDPPPTEAPAPNPWVDNSTTPAPGTTPSPTTTTIGPVLVGPSTAPTTPAPLDAGATGYLGCF 119
            G+TFFGVQ++++CFCG STADY KHGSL   +CEYLC+A P++FCGGF+ MEVFTIE P  TEAPA +P V     P     PSPTTT                 P DA    YLGC+
Sbjct:    5 GATFFGVQFAYECFCGSSTADYDKHGSLPDSDCEYLCDANPDQFCGGFSAMEVFTIEAPAETEAPATSPLVAQPIEPI---APSPTTT-----------------PSDAS---YLGCY 99          
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Match: D7G960_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G960_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 5.760e-27
Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    1 LGSTFFGVQYSFQCFCGPSTADYAKHGSLTSDNCEYLCEAYPEEFCGGFATMEVFTIE 58
            LGSTF GVQ SFQCFCGPSTADYAKHGSL+SDNCEYLC A+PE+FCGGF+TMEVF I+
Sbjct:  391 LGSTFSGVQNSFQCFCGPSTADYAKHGSLSSDNCEYLCHAHPEDFCGGFSTMEVFRID 448          
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 2.180e-17
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    2 GSTFFGVQYSFQCFCGPSTADYAKHGSLTSDNCEYLCEAYPEEFCGGFATMEV 54
            G+T+FGV++S++CFCG STAD+ KHGSL    CEYLC+A P++FCGGF  +EV
Sbjct:  620 GATYFGVEFSYECFCGSSTADFDKHGSLPDSECEYLCDANPDQFCGGFGAIEV 672          
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Match: A0A6H5L0X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X8_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.590e-13
Identity = 47/68 (69.12%), Postives = 53/68 (77.94%), Query Frame = 0
Query:   53 EVFTIEDPPPTEAPAPNPWVDNSTTPAPGT-TPSPTTTTIGPVLVGPSTAPTTPAPLDAGATGYLGCF 119
            +VFTI DP PTEAPAP  +V N +T APGT +P PT    GPVLVGPSTAPTTP P++AGA GYLGCF
Sbjct:   27 KVFTIGDPTPTEAPAPTIFV-NPSTKAPGTLSPVPT---AGPVLVGPSTAPTTPVPVNAGAAGYLGCF 90          
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Match: D7FRS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 6.620e-9
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    2 GSTFFGVQYSFQCFCGPSTADYAKHGSLTSDNCEYLCEAYPEEFCGGFATMEVFT 56
            GST+FG+QY  +CFCG S+ D  +HG  T+  C+Y C    +E CGGF  M V++
Sbjct:  460 GSTYFGMQYGRECFCGGSSTDLLQHGESTA--CDYECPGDSDELCGGFYAMSVYS 512          
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 3.480e-6
Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0
Query:    2 GSTFFGVQYSFQCFCGPSTADYAKHGSLTSDNCEYLCEAYPEEFCGGFATMEVFTIEDPP 61
            GST+FG +Y+F+CFC  S     + G  +  NC+  C     E CGGF  ++V+ +ED P
Sbjct:  325 GSTYFGTEYAFECFCSSSGDSPDELGEAS--NCDMTCSGDSSETCGGFNAIQVYMLEDGP 382          
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Match: A0A6G1NFZ1_VERDA (tRNA (Guanine-N(7)-)-methyltransferase subunit TRM82 n=11 Tax=Verticillium TaxID=1036719 RepID=A0A6G1NFZ1_VERDA)

HSP 1 Score: 51.6 bits (122), Expect = 4.310e-5
Identity = 20/60 (33.33%), Postives = 33/60 (55.00%), Query Frame = 0
Query:    2 GSTFFGVQYSFQCFCGPSTADYAKHGSLTSDNCEYLCEAYPEEFCGGFATMEVFTIEDPP 61
            GST+FGV+Y  +C+CG +  D     +   D+C +LC      FCG    ++++ + D P
Sbjct: 1401 GSTYFGVEYGRECYCGDALRDATVKRADNQDDCSFLCPGDKTTFCGAGVRLQLYKLGDAP 1460          
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Match: A0A6H5JVT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT8_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 5.070e-5
Identity = 20/57 (35.09%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    2 GSTFFGVQYSFQCFCGPSTADYAKHGSLTSDNCEYLCEAYPEEFCGGFATMEVFTIE 58
            G +F+G+QYS QC+CG    +Y+ +G      C+  C     + CGGF +M++++I+
Sbjct:  263 GFSFYGLQYSIQCWCGDHNTEYSANGDGV---CDMPCGGDAYDMCGGFYSMDIYSID 316          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8609.20036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G957_ECTSI2.200e-4068.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G961_ECTSI1.800e-3767.50Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
A0A6H5JZZ1_9PHAE7.120e-2952.54WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G960_ECTSI5.760e-2784.48Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
D7G4P3_ECTSI2.180e-1762.26Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
A0A6H5L0X8_9PHAE2.590e-1369.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRS2_ECTSI6.620e-947.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LC73_ECTSI3.480e-640.00Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6G1NFZ1_VERDA4.310e-533.33tRNA (Guanine-N(7)-)-methyltransferase subunit TRM... [more]
A0A6H5JVT8_9PHAE5.070e-535.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 2..48
e-value: 1.2E-6
score: 28.6
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 1..58
score: 7.643
NoneNo IPR availablePANTHERPTHR24269:SF19coord: 2..89
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 2..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8609contigEcto-sp13_S_contig8609:893..3563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8609.20036.1mRNA_Ecto-sp13_S_contig8609.20036.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8609 893..3564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8609.20036.1 ID=prot_Ecto-sp13_S_contig8609.20036.1|Name=mRNA_Ecto-sp13_S_contig8609.20036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=120bp
LGSTFFGVQYSFQCFCGPSTADYAKHGSLTSDNCEYLCEAYPEEFCGGFA
TMEVFTIEDPPPTEAPAPNPWVDNSTTPAPGTTPSPTTTTIGPVLVGPST
APTTPAPLDAGATGYLGCFA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd