prot_Ecto-sp13_S_contig8608.20035.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8608.20035.1
Unique Nameprot_Ecto-sp13_S_contig8608.20035.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length241
Homology
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Match: D7FMD4_ECTSI (Similar to TPR, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD4_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 5.330e-146
Identity = 239/241 (99.17%), Postives = 239/241 (99.17%), Query Frame = 0
Query:    1 MRLMQMERELEYVRSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELEDXXXXXXGRPVERNGGGGDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQMTAELKDAKTAKDVEQRSLNSKVVQEMERQLDELKESRKRQDEMLVTVTGARHAEDQVKTLMADRASRTKQLDVASDKFMRLSGNVVRLQ 241
            MRLMQMERELEYVRSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELEDXXXXXXGRPVERNGGGGDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQMTAELKD K AKDVEQRSLNSKVVQEMERQLDELKESRKRQDEMLVTVTGARHAEDQVKTLMADRASRTKQLDVASDKFMRLSGNVVRLQ
Sbjct:   24 MRLMQMERELEYVRSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELEDXXXXXXGRPVERNGGGGDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQMTAELKDTKAAKDVEQRSLNSKVVQEMERQLDELKESRKRQDEMLVTVTGARHAEDQVKTLMADRASRTKQLDVASDKFMRLSGNVVRLQ 264          
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Match: A0A6H5KRL3_9PHAE (TPR_MLP1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRL3_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 5.200e-90
Identity = 195/310 (62.90%), Postives = 195/310 (62.90%), Query Frame = 0
Query:   39 MSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELE------------------DXXXXXXGRPVERNGGGGDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQMTAELKDAKTAKDVEQRSLNSKVVQEMERQLDELKESRKRQDEMLVTVTGAR-----------------------------------------------------------------------------------------HAEDQVKTLMADRASRTKQLDVASDKFMRLSGNVVRLQ 241
            MSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELE                  D      GRPVERNGG GDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQMTAELKDAKTAKDVEQRSLNSKVVQEMERQLDELKESRKRQDEMLV VTGAR                                                                                         HAEDQVKTLMADRASRTKQLDVASDKFMRLSGNVVRLQ
Sbjct:    1 MSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELEVTKDSLADLGAQVQKLLKDKLERDLGRPVERNGGAGDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQMTAELKDAKTAKDVEQRSLNSKVVQEMERQLDELKESRKRQDEMLVAVTGARDTYRLALAQEAMKNGXXXXXXXXXXXXXAQELEAMKSRVHELERDLGVSRDESRKLQESLRLMGEEVTTAERARSKATADFVSAQRLLSHAEDQVKTLMADRASRTKQLDVASDKFMRLSGNVVRLQ 310          
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Match: A0A7R9U495_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U495_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 6.630e-11
Identity = 53/195 (27.18%), Postives = 109/195 (55.90%), Query Frame = 0
Query:    8 RELEYVRSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRI-------ERELEDXXXXXXGRPVERNGGGGDGGVSKGGNVVP---------QDLDQVISDHLVTFQDIRELQERNRSLVQVVRQMTAELKDAKTAKDVEQRSLNSKVVQEMERQLDELK 186
            RE +  +++++R ++YL+RIL+++++K+P+L + K++YQRVLQS+  L  + E + +  ++   E   AA   DR+       ++E++D          +  GGG          V+P         ++ ++ IS+HLV F  + ELQ++N  L++VVR+++  +++  T    E R  +   +++  ++L+EL+
Sbjct:  358 RECDQYKAEKERLEIYLSRILKDIEEKAPVLAAQKREYQRVLQSYGHLTTRYEEACKELEEVRSEAMAAADETDRLREENGALQQEVQDVSAQLRAMLQKEMGGGA--------AVIPDTTPATDFVRNSEETISEHLVRFSSVEELQKKNAQLLRVVRKLSRRVEEEDTLALSESRIEHQAALKQALKRLEELR 544          
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Match: A0A7S1UHX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHX5_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 8.600e-11
Identity = 53/184 (28.80%), Postives = 106/184 (57.61%), Query Frame = 0
Query:   16 DRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRRCQK-------AEMEREVAARGRDRIERELEDXXXXXXGRPVERNGGGGDGGVSKGGN---VVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQMTAELKDAKTAKDVEQRSLNSKVVQEMERQLDELKESR 189
            +++R ++YL RIL+++++K+P+L + K++YQRVLQS+  L  + E + R  ++        E +R+  A   + +++E++D       R + +   G D  V    N      ++ D+ I++HLV F+ + ELQ++N  L++VVR+++   ++  T    E R  +   +++  +QL+ELK +R
Sbjct:    1 EKERLEMYLGRILKDIEEKAPVLAAQKREYQRVLQSYGHLSTRYEEACRELEELRGDAAGGEDDRKRLADENEALQQEIQDVSSQL--RSMLQKEAGTDAAVIPDTNPATATARNSDEAITEHLVNFRSVEELQKKNAQLLRVVRKLSRRAEEEDTMALNETRVEHQAALKQALKQLEELKGAR 182          
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Match: A0A7S3CEI5_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CEI5_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 1.730e-10
Identity = 70/225 (31.11%), Postives = 117/225 (52.00%), Query Frame = 0
Query:   14 RSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRR-------CQKAEMEREVAARGRDRIERELEDXXXXXX-----------GRPV--ERNGGGGDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQM--TAELKDAKTAKDVEQRSLNSKVVQEMERQLDELKESRKRQDEMLVTVTGARHAEDQVKTLMADR 216
            RSD+ R Q YL  IL E+++K+PL+   K++Y+RV++SH+ L  ++E +M           KA  + + AAR +  +E++ ED                 GR +   R  G G G  S  G VV      VI+DHLV F+ I ELQ++N+ L+ V RQ+    E K +   K +E+   ++K +  +E + ++L +  K+ + ++  V   R   D  K L+++R
Sbjct:  394 RSDKKRVQGYLDTILEELERKAPLINEQKQEYERVMRSHDALAKRLEDAMHERAALDATIGKARSDAQRAAREKRSVEQQAEDLSRQVQVLLKEVEDLKSGRALVGSRGNGAGAGQTSSNGGVVR--ASDVINDHLVEFKSIEELQQKNKQLLAVARQLGDDNEQKVSDVRKSLEEE--HAKQIAAVELRAEKLSQQHKQHEGLMQQVLRQR---DLYKQLLSER 611          
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Match: UPI00106C6780 (nucleoprotein TPR-like isoform X1 n=3 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C6780)

HSP 1 Score: 70.1 bits (170), Expect = 4.360e-10
Identity = 71/227 (31.28%), Postives = 118/227 (51.98%), Query Frame = 0
Query:   10 LEYVRSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELEDXXXXXXG---------RPVERNGGGGDGGVSKGGNVVPQDL----------DQVISDHLVTFQDIRELQERNRSLVQVVRQMTAELK--DAKTAKDVEQRSLNSKVVQEMERQLDELKESRKRQDEMLVTVTGARHAEDQVKTLMAD 215
            LE  +++  R + YL  IL+++++K+PLL   +KDY+  L + ++L LK+E +M+  +K  ME   A +  + + RE E                 +  E   G     VS   ++V  DL           +VIS  LVTF++I ELQE+N+ L+ VVR+++ E +  + K   D+    L  K+ + +  +L+ELKESR+RQ  M+  V   R   D  + L+A+
Sbjct:  427 LEIEKAENGRLKGYLEDILKDIEEKAPLLQQQRKDYEGSLITIDKLTLKLEDAMKEMEKYSMETSEAVQKSEHLRRENERMKVLTADLASQVKVLLKECEEARGSV---VSTTSSIVLDDLAHSHDEVSSSSEVISSRLVTFRNIEELQEQNQRLLTVVRELSEEKEKDEQKEKSDLAHTELKQKLDEALN-ELEELKESRERQTSMVEAVVRQR---DMYRVLLAN 646          
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Match: A0A2C9LYU0_BIOGL (Nucleoprotein TPR n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LYU0_BIOGL)

HSP 1 Score: 68.9 bits (167), Expect = 1.030e-9
Identity = 64/207 (30.92%), Postives = 114/207 (55.07%), Query Frame = 0
Query:   14 RSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELEDXXXXXXGRPVERNGGGGDGGVSKGGNVVPQDLD----------QVISDHLVTFQDIRELQERNRSLVQVVRQMTAELKDAKTAKDVEQRSLNSKVVQEMERQLD-------ELKESRKRQDEMLVTVTGAR 203
            R +  R   YL +IL+E+++K+PLL   ++DY+  L + +QL  +++++M  C+K   + +   R    I+RE   XXXXXX           +    KGG VV  +LD           +IS+ LVTF+ I ELQ++N+ L++V R+++ +       K++E+  + S+  +E++ QLD       +LK++R RQ E++ ++   R
Sbjct:  257 REENKRLNSYLEQILQEIEEKAPLLKKQREDYETTLNNLDQLTSQLDSAMLECEKLRADADDMRRRYGHIQREXXXXXXXXXXXXXXXXXLLKEVEELKGGRVVRDELDVSSSEVSSSSNIISEKLVTFRSIEELQQQNQRLIEVCRELSEK-------KELEENEMTSEKTKELKEQLDFALSELEQLKDARARQTELVESIVRQR 456          
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Match: A0A6P4ZV58_BRABE (Nucleoprotein TPR n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZV58_BRABE)

HSP 1 Score: 68.9 bits (167), Expect = 1.070e-9
Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = 0
Query:    9 ELEYVRSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELEDXXXXXXG---------RPVERNGGG----GDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQMTAELKDAKTAKDVEQRSLNSKVVQEMERQLD-------ELKESRKRQDEMLVTVTGARHAEDQVKTLMADRAS 218
            +LE  + +  R + YL +IL E++QK+P+L   ++DY+R LQ+  +L  K++ +   C++   E + + R    + RE E                 + VE   GG    G+  VS   +V      QVIS  LVTF+ I ELQERN  L+ ++R+M+AE + A       ++      +QE+ERQL+        L+E+R +Q  M+ ++   R   D  + L+A + +
Sbjct:  400 QLELEKMESTRMKGYLDQILEEIEQKAPVLQRQREDYERSLQTINKLSQKLDTTALECEQLRAEVDDSRRRTSHLTRENERLSTRAVDLSQQVRVLLKEVEEARGGHVASGEAEVSSSADVATSS--QVISQKLVTFRSIEELQERNEQLLTLMREMSAEHERA-------EKETTDTRIQELERQLEMSLQDVEALREARDKQQTMVESLVQQR---DMYRVLLAQQTA 617          
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Match: A0A5B8MVV5_9CHLO (Nucleoprotein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MVV5_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 1.900e-9
Identity = 68/222 (30.63%), Postives = 123/222 (55.41%), Query Frame = 0
Query:   14 RSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRR-------CQKAEMEREVAARGRDRIERELEDXXXXXXG--RPVE--RNG----GGGDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQM--TAELKDAKTAKDVEQRSLNSKVVQEMERQLDELKESRKRQDEMLVTVTGARHAEDQVKTLMADRAS 218
            R+D+ + Q YL  IL E+++K+PL+   K +Y+R++ SH+ L  ++E ++           KA  + + AAR +  IE++ ED         + VE  ++G    GG     S    VV      VI+DHLV F+ I+ELQE+N+ L+ V RQ+    E K +   K++E+   ++K +Q+++ Q+D+L   R++Q++++  +   R   D  K+L+ ++ S
Sbjct:  409 RNDKKKIQGYLDTILEELERKAPLINEQKAEYERLMNSHDALAKRLEDAINERATLESTMSKARSDVQRAAREKKAIEQQAEDLSRQVQVLLKEVEDMKSGRALMGGASQTTSSANGVVG--ASDVITDHLVEFKSIKELQEQNKRLLAVARQLGDDNEQKVSDVRKNLEEE--HTKQMQDVKSQVDKLSSQREQQEKLMQQILRQR---DLYKSLLMEKES 623          
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Match: A0A662YA30_9STRA (TPR_MLP1_2 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YA30_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.590e-9
Identity = 47/162 (29.01%), Postives = 88/162 (54.32%), Query Frame = 0
Query:    3 LMQMERELEYVRSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQSHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELEDXXXXXXG-----------RPVERNGGGGDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVRQMT 153
            ++++E  L+  R+D+D+ QLY+ RI++EV +K+P+LM  + D++R + SH Q+  ++E  M+   K++ + + A + +   E++ E                    P +R    G G  + G          V S++LV F+D+ ELQ RN+ L+ V+R++T
Sbjct:  371 IVELEEALQSERNDKDKLQLYMDRIVKEVQEKAPILMGLRLDHERAVASHTQMSERLEQCMQELSKSKSKEQQAWKDKHAFEKKCESLAQSVDDLSRQVQHLLFRSPEQRQQASGSGHFAPG---------VVASENLVVFKDVEELQVRNQQLLTVIRELT 523          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8608.20035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMD4_ECTSI5.330e-14699.17Similar to TPR, partial n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRL3_9PHAE5.200e-9062.90TPR_MLP1_2 domain-containing protein n=1 Tax=Ectoc... [more]
A0A7R9U495_9STRA6.630e-1127.18Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1UHX5_9STRA8.600e-1128.80Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3CEI5_9CHLO1.730e-1031.11Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
UPI00106C67804.360e-1031.28nucleoprotein TPR-like isoform X1 n=3 Tax=Dendrone... [more]
A0A2C9LYU0_BIOGL1.030e-930.92Nucleoprotein TPR n=1 Tax=Biomphalaria glabrata Ta... [more]
A0A6P4ZV58_BRABE1.070e-930.00Nucleoprotein TPR n=3 Tax=Branchiostoma TaxID=7737... [more]
A0A5B8MVV5_9CHLO1.900e-930.63Nucleoprotein n=2 Tax=Chloropicon primus TaxID=176... [more]
A0A662YA30_9STRA2.590e-929.01TPR_MLP1_2 domain-containing protein n=2 Tax=Notho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 171..195
NoneNo IPR availableCOILSCoilCoilcoord: 135..155
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
NoneNo IPR availablePANTHERPTHR18898NUCLEOPROTEIN TPR-RELATEDcoord: 6..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8608contigEcto-sp13_S_contig8608:167..6203 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8608.20035.1mRNA_Ecto-sp13_S_contig8608.20035.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8608 164..6203 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8608.20035.1 ID=prot_Ecto-sp13_S_contig8608.20035.1|Name=mRNA_Ecto-sp13_S_contig8608.20035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=241bp
MRLMQMERELEYVRSDRDRNQLYLTRILREVDQKSPLLMSNKKDYQRVLQ
SHEQLFLKVEASMRRCQKAEMEREVAARGRDRIERELEDKLERDLGRPVE
RNGGGGDGGVSKGGNVVPQDLDQVISDHLVTFQDIRELQERNRSLVQVVR
QMTAELKDAKTAKDVEQRSLNSKVVQEMERQLDELKESRKRQDEMLVTVT
GARHAEDQVKTLMADRASRTKQLDVASDKFMRLSGNVVRLQ
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