prot_Ecto-sp13_S_contig8605.20033.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8605.20033.1
Unique Nameprot_Ecto-sp13_S_contig8605.20033.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length379
Homology
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Match: D8LRJ6_ECTSI (Cyclin H n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ6_ECTSI)

HSP 1 Score: 672 bits (1734), Expect = 9.950e-243
Identity = 354/378 (93.65%), Postives = 362/378 (95.77%), Query Frame = 0
Query:    1 MDFNTSTHRRHWLFTKETLREVQEETAKLAAEACAAGTPPEGSRSFAVTRSTAGNKSGGQVTTDSEEGTLDVKGEGGVPATDTGEGDGGGKGHWDGSGKKRPAPTAPSAELLLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDILVTDLPFLHPPSRLALAALLRESRRMEAPPFDLPALLGKEFGDREGWQDVLREAQRLALELDAILPYRVEKDKLIAVNKKLKKHAWWSQKRGRVEGGGGRERRKSKKIKTEA 378
            M+FN+STHRRHWLFTK TLREVQEETAKLAAEACAAGTPPEGSRSFAVTRSTAG+KSGG+ TTD+EEGTLDVKGEGGVPATDTGEG          SGKKRPAPTA SAE LLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATA+AYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDI+VTDLPFLHPPSRLALAALLRESRRMEAPPFDLPALLGKEFGDREGW+DVLREAQRLALELD ILPYRVEKDKLIAVNKKLKKHAWWSQKRGR EGGGGRERRKSKKIKTEA
Sbjct:    1 MEFNSSTHRRHWLFTKGTLREVQEETAKLAAEACAAGTPPEGSRSFAVTRSTAGDKSGGRATTDNEEGTLDVKGEGGVPATDTGEGXXXXXXXXXXSGKKRPAPTASSAEPLLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAIAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDIVVTDLPFLHPPSRLALAALLRESRRMEAPPFDLPALLGKEFGDREGWKDVLREAQRLALELDEILPYRVEKDKLIAVNKKLKKHAWWSQKRGRAEGGGGRERRKSKKIKTEA 378          
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Match: A0A7S3XH57_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XH57_HETAK)

HSP 1 Score: 134 bits (338), Expect = 6.960e-35
Identity = 69/133 (51.88%), Postives = 96/133 (72.18%), Query Frame = 0
Query:  108 SAELLLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKA 240
            S    LTVEEE ++K YY+  IQ  CGR++ +  LRRS KVQATA+ +F RFYL+NS++ +DPKI++LTCV+LASK EE++ NV  LA+ATG  + ++L  E+ +LQGL F L  +HPYRAL A ++   + A
Sbjct:   11 SDSSFLTVEEESMLKIYYSGMIQALCGRNTDELKLRRSSKVQATAIVFFKRFYLANSIMAYDPKIIMLTCVYLASKIEEEIINVADLAQATGQQEDKVLRAEMPVLQGLRFELRCYHPYRALRAFLDDLAVAA 143          
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Match: A0A7S4ARS1_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ARS1_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.080e-33
Identity = 98/282 (34.75%), Postives = 146/282 (51.77%), Query Frame = 0
Query:  102 PAPTAPSAELLLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDL-----QILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTE------------GIPPQPERIMALHDGARAALDDILVTDLPFLHPPSRLALAALL----RESRRMEAPPFDLPALLGKEFGD------REGWQDVLREAQRLALELDAILPYRVEKDKLIAVNKKLKKHAWWSQK 356
            P  T  S E L T+EEE L+ ++YA K+    G  +    LRR  KV ATA     RFYLSNSV+ HDPK ++++  FLASK E+ MT+V  L + T L +      +IL  E  LL G++F L  FHPY+A+ A+ E  R   K+E              P   + +  +HD A++ ++D++V+D+P L+ P ++ LAAL+    ++  +   P  DL   L   F D      R   +++  + Q L         Y+V+  KL  ++KKLKK   W  K
Sbjct:   68 PTHTEDSKEFL-TLEEENLLVSFYASKLPSLIGPLAQLPRLRRESKVPATAATLLRRFYLSNSVMIHDPKTIMVSAAFLASKVEDAMTDVRYLEEGTNLMNSPVTLSEILPAETKLLSGINFELLCFHPYKAVLAITEDLRTYLKSEKGRSLVKFLNGTDRPIIGQDLKPMHDDAQSIVNDVIVSDIPLLYTPGQIGLAALIVANEKQRGKDNVPQIDLMGYLSHRFEDADIARMRSLLKEIGTKLQELKEGQHGCANYKVDMQKLKGIHKKLKKCRVWGVK 348          
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Match: A0A8K1C540_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C540_PYTOL)

HSP 1 Score: 132 bits (332), Expect = 2.620e-31
Identity = 75/190 (39.47%), Postives = 116/190 (61.05%), Query Frame = 0
Query:  113 LTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDILVTDLPFLHPPSRLALAALLRESRRMEAPPFDLPAL 302
            L+VE+E LV+ YY  K+QE+C      +  R SDKV+ +AV  F RFYLSNSV+E  PK ++ T +++A K EEQ  NV+ +A    +D   ++  E+ LL+G+ F L ++HP+RAL   V+  R  +K +G     E +  LH  +   ++++L+T+LP +H P+ LALAAL   +  +E    + PAL
Sbjct:  116 LSVEQERLVREYYESKVQESCS-----QLFRTSDKVKCSAVMLFKRFYLSNSVMEFHPKYIVPTAIYVAGKVEEQYINVDTIADQLKVDHKHVIDHEMILLEGVRFQLIMYHPFRALLGFVDDFRGFSKAQGRDLPLEALQKLHANSCVVVNELLLTELPLVHYPAYLALAALCHVAEELER---ETPAL 297          
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Match: A0A662YDE0_9STRA (CYCLIN domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDE0_9STRA)

HSP 1 Score: 130 bits (328), Expect = 9.610e-31
Identity = 74/175 (42.29%), Postives = 111/175 (63.43%), Query Frame = 0
Query:  112 LLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMA-LHDGARAALDDILVTDLPFLHPPSRLALAAL 285
             L+ ++E L++++Y +KI E+C      + LR SDKV+  AV  F RFYLSNSV+E  PK ++ T +++A K EEQ  +V+ +A    +D   I+G E+ LL+G+ F L ++HP+RAL   ++  R+ AK       P  ++  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  104 FLSADQEALLRDFYEQKIVESCSA----QFLRTSDKVKCCAVLLFKRFYLSNSVMEFHPKFMVPTAIYVAGKVEEQYMSVDTVADQLHVDHKFIIGHEMVLLEGVRFQLIMYHPFRALLGFLDDFRVFAKQALAKELPANVLQKLHANSSALLNDLLLTDLPLLHYPSYLALAAL 274          
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Match: A0A024GEU2_9STRA (CYCLIN domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GEU2_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.270e-30
Identity = 71/175 (40.57%), Postives = 111/175 (63.43%), Query Frame = 0
Query:  111 LLLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDILVTDLPFLHPPSRLALAAL 285
            LL ++EEE  +  +Y  K+QE+C      +  R S+KV+++A+  F RFYLSNSV E  PK L+ T +++A+K EEQ  +V  +A+   +D   ++G E+ LL+G+ FHL ++HP+R L   V+  RL AK +G     E +  LH  A   +++ L+TD+P L+ P++LALAAL
Sbjct:  107 LLPSLEEEKTLVEFYESKVQESC-----TQLFRTSEKVKSSAIQLFKRFYLSNSVAEFHPKYLVPTVIYVAAKVEEQYISVETIAEHLKVDHKHVIGHEMILLEGVRFHLIMYHPFRPLLGFVDDLRLYAKAKGKQLPLELLQILHTKASVVVNEFLLTDVPLLYHPAQLALAAL 276          
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Match: D8SKW4_SELML (Uncharacterized protein CYCH-2 n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SKW4_SELML)

HSP 1 Score: 127 bits (320), Expect = 3.550e-30
Identity = 79/176 (44.89%), Postives = 105/176 (59.66%), Query Frame = 0
Query:  113 LTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARL---KAKTEGIPPQPERIMALHDGARAALDDILVTDLPFLHPPSRLALAAL 285
            L +EEE  ++ YY  KIQ+ CG  S        +K+QATAV YF RFYLS SV+EHDPK ++LTC++++ K EE   +   L K    D   IL  ELTLLQGL+F L V+ PYR+L   V   +     AK E +    ++I+ L   A   +D +L+TD P L PP +LALAAL
Sbjct:   68 LKIEEELFIRRYYEHKIQQVCGAFSFP------NKIQATAVLYFKRFYLSWSVMEHDPKHIMLTCIYISCKVEEFHVSAEELGKGIQQDHQVILKNELTLLQGLNFDLIVYAPYRSLDGFVLDIQKWADAAKDENVS---QKILDLQSEAIRKVDAMLLTDCPLLFPPGQLALAAL 234          
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Match: H3GBD3_PHYRM (CYCLIN domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBD3_PHYRM)

HSP 1 Score: 129 bits (323), Expect = 4.720e-30
Identity = 76/175 (43.43%), Postives = 109/175 (62.29%), Query Frame = 0
Query:  112 LLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMA-LHDGARAALDDILVTDLPFLHPPSRLALAAL 285
             L  E+E L++ +Y +KIQE+C      + LR SDKV+  A+  F RFYLSNSV+E  PK L+ T +++A K EEQ  +V+ +A    +D   I+G E+ LL+G+ F L ++HP+RAL   ++  R  AK       P  ++  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  103 FLNPEQEALLRAFYEEKIQESCSA----QFLRTSDKVKCCAMLLFKRFYLSNSVMEFHPKFLVPTAIYVAGKVEEQYMSVDTVADQLHVDHKFIIGHEMILLEGVRFQLIMYHPFRALLGFLDDFRAFAKQVLSKDLPATVLQKLHANSTALLNDMLLTDLPLLHYPSVLALAAL 273          
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Match: A0A421F9D0_9STRA (CYCLIN domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F9D0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 6.660e-30
Identity = 74/175 (42.29%), Postives = 111/175 (63.43%), Query Frame = 0
Query:  112 LLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMA-LHDGARAALDDILVTDLPFLHPPSRLALAAL 285
             L+ E+E L++++Y +KIQE+C      + LR SDKV+  AV  F RFYLSNSV+E  PK ++ T +++A K EEQ  +V+ +A    +D   I+G E+ LL+G+ F L ++HP+RAL   ++  R  +K       P  ++  LH  + A L+D+L+TDLP LH P+ LALAAL
Sbjct:   68 FLSAEQETLLRDFYEEKIQESCSA----QFLRTSDKVKCCAVLLFKRFYLSNSVMEFHPKFMVPTAIYVAGKIEEQYISVDTVADQLHVDHKFIIGHEMILLEGVRFQLIMYHPFRALLGFMDDFRAFSKQVLSNDLPATVLQKLHANSCALLNDMLLTDLPLLHYPAYLALAAL 238          
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Match: F0W4T4_9STRA (CyclinH putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4T4_9STRA)

HSP 1 Score: 128 bits (321), Expect = 7.550e-30
Identity = 68/175 (38.86%), Postives = 113/175 (64.57%), Query Frame = 0
Query:  111 LLLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDILVTDLPFLHPPSRLALAAL 285
            LL ++EEE L+ ++Y  K+ ++C      +  R S+KV+++A+    RFYLSNSV E  PK L+ T +++A+K EEQ  +V  +A+   +D   ++G E+ LL+G+ FHL ++HP+R L A V+  R+ AK +G     E + +LH  A + ++++L+TD   L+ P++LALAAL
Sbjct:   97 LLPSLEEENLLVSFYQSKVHDSCS-----QLFRTSEKVKSSAIQLLKRFYLSNSVAEFHPKYLVPTVIYVAAKVEEQYISVETIAEQLKVDHKHVIGHEMILLEGVRFHLIMYHPFRPLLAFVDDLRIYAKAQGKQLSLELLQSLHTKANSVVNELLLTDATLLYHPAQLALAAL 266          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8605.20033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRJ6_ECTSI9.950e-24393.65Cyclin H n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A7S3XH57_HETAK6.960e-3551.88Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4ARS1_9STRA1.080e-3334.75Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A8K1C540_PYTOL2.620e-3139.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662YDE0_9STRA9.610e-3142.29CYCLIN domain-containing protein n=1 Tax=Nothophyt... [more]
A0A024GEU2_9STRA1.270e-3040.57CYCLIN domain-containing protein n=1 Tax=Albugo ca... [more]
D8SKW4_SELML3.550e-3044.89Uncharacterized protein CYCH-2 n=4 Tax=Selaginella... [more]
H3GBD3_PHYRM4.720e-3043.43CYCLIN domain-containing protein n=1 Tax=Phytophth... [more]
A0A421F9D0_9STRA6.660e-3042.29CYCLIN domain-containing protein n=3 Tax=Phytophth... [more]
F0W4T4_9STRA7.550e-3038.86CyclinH putative n=1 Tax=Albugo laibachii Nc14 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 127..214
e-value: 4.0E-6
score: 36.3
NoneNo IPR availableGENE3D1.10.472.10coord: 108..221
e-value: 1.8E-21
score: 78.3
NoneNo IPR availableGENE3D1.10.472.10coord: 223..325
e-value: 2.0E-15
score: 58.8
NoneNo IPR availablePANTHERPTHR10026:SF8CYCLIN-Hcoord: 1..349
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 1..349
IPR031658Cyclin, C-terminal domain 2PFAMPF16899Cyclin_C_2coord: 224..293
e-value: 1.7E-7
score: 31.6
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 146..220
e-value: 5.7E-11
score: 42.2
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 5..222
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 224..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8605contigEcto-sp13_S_contig8605:37..6346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8605.20033.1mRNA_Ecto-sp13_S_contig8605.20033.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8605 2..6420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8605.20033.1 ID=prot_Ecto-sp13_S_contig8605.20033.1|Name=mRNA_Ecto-sp13_S_contig8605.20033.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=379bp
MDFNTSTHRRHWLFTKETLREVQEETAKLAAEACAAGTPPEGSRSFAVTR
STAGNKSGGQVTTDSEEGTLDVKGEGGVPATDTGEGDGGGKGHWDGSGKK
RPAPTAPSAELLLTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQA
TAVAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGL
DDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPE
RIMALHDGARAALDDILVTDLPFLHPPSRLALAALLRESRRMEAPPFDLP
ALLGKEFGDREGWQDVLREAQRLALELDAILPYRVEKDKLIAVNKKLKKH
AWWSQKRGRVEGGGGRERRKSKKIKTEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR031658Cyclin_C_2
IPR006671Cyclin_N
IPR036915Cyclin-like_sf