prot_Ecto-sp13_S_contig860.20021.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig860.20021.1
Unique Name	prot_Ecto-sp13_S_contig860.20021.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	1181

Homology

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BLAST of mRNA_Ecto-sp13_S_contig860.20021.1 vs. uniprot
Match: A0A6H5KFG5_9PHAE (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFG5_9PHAE)

HSP 1 Score: 1732 bits (4486), Expect = 0.000e+0
Identity = 1080/1193 (90.53%), Postives = 1103/1193 (92.46%), Query Frame = 0

Query:    1 MAIGGGMVPGGDDLLTRDAGTIAEYIRLMSFEVLGEEAQGRDRPVERWHQ----------PGLSLTEALDKAEATAARPARLPNLLALAAAIRPVDSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GSDPRAGAPGAKRRRVDANAIMCPFELNGVCNDDDCRYQHLDVYLPPSLNPGASPVPNSSSAAANIQPAKSSASGPGGASPVXXXLXXXXXXXXARTDERASALGQHRLPAIDFTGAAKRDAVARAREDGRRGVVKPSSWRQPSPETGGLTPTAAEGGXXXXXXXXXXXXXXXXVSGELEEADAVDSGEXXXXXXXXXXXXXDFLALPTERTENTGGDSGEASSETXXXXXXXTAPEQASPAALAKAFALAASGALASDGRSNVVRGAGGSGVGREERYYLEGGDGKTQGAASAALPDDQLSELEAQLNEGTSCDVEGWLLLAMHRLPRTGGSAKAVLNTISASDVACGASGPMGSVDQAAIKSALRTFVRPLERAEGGHAEVLWLLYLRVFDFLPGKSEDALGMAEYALEKFPTSRRIWRLYHSMLQTSPGWSLSEDVSCYRRQIEALLLLQPRAVDMRASPQDSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEANVKMILYLVLERCSLLAEAGYKLQAAAEVLDSLGALAEGQPLWGWDARDGQGRRTLLRTREGGGHARKGEGKGARREEGGAKAGGSTEAGDDDGQRLPAGVAAALKRAPRDSRCVLWLTALHLLVMGVFPRHALTLAENDGGGLGGSNDTTAAGGGLADLLLWPTEWLSPKSSAILRLSASPDLQDATLKTFMTALSDVGLLPPPRSQGCWAPAIKDRDALLSSAAEAKAARAGGMAPDASALEGPPLVLALNWLAFCLRRGRVDARQGRMMAFACCRRFQLSRPDQPALLEHFLLEHAVSKTRTLGDTYHEISRAFDADGVAAGALRERRDGEGKSASLNPAGARRRNEQSVNLVPQPSGERIQAVYAFLRFVESRLEAARSESESANDAGRGALEDARRVLRDALVGMWTGGXXXXXXXXXXXXXXXXXRSDSDRWLEEEGGESVRRALEGAKASLFRWADGGSGGCDAPGGNGERQLSTIVFSLWVLGGASAAIGSLDHILSAESFSGVSAERKRLAWLQRLEAAMILSTQQQQKQQ 1181
            MAIGGGMVPGGDDLLTRDAGTIAEYIRLMSFE+LGEE+QGRDRPVERWHQ          PGLSLTEALDKAEATAARPARLPNLLALAAAIRPVDSSA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  G +PRA APGAKRRRVDANAIMCPFELNGVCNDDDCRYQHLDVYLPP LNPG S  P S+SAAAN+QPAKSSASGPG  SPV   L        ARTDERASALGQHRLPAIDFTGAAKRDAVARARE+GRRGVVKPSS RQP+ ETGG+TPTAAEGG    XXXXXXXXXXXX  GELEEADAVDSGEXXXXXXXXXXXXX FLALPTER EN GGD GEASS T        APEQASPAALAKAFALAASGALAS GR NVVRGAGGSGVGREERYYLEGGDGKTQGAASAALPDDQLS LEA+LNEG SCDVEGWLLLAMH+LPR GGSAKAVLNTIS  DVACGASGPMGSVDQAA+KSALRTFVRPLERA+G  AEVLWLLYLR+F FLPGKS+DALGMAEYALEKFPTSRRIWRLYHSMLQTSPGWSL EDVSCYRRQIEALLLLQPRA DMRASPQD    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEA VKMI+YLVLERCSLLAEAGYKLQAAAEVLDSLGALAEGQPLWGWDARDGQGRRTLLRT EGGGH R+GEG GA R  GGA AGGSTEA DD+GQRLPAGVAAALK APRDSRCVLWLTALHLLVMGVFPRHALTLAENDGGGLGGSNDTTAAGG LA LLLWPTEWLSPKSSAILRLSASPDLQDATLKTFMTALSDVGLLPPPRSQGCWAPAIKDRDALLSSAAEAKAARAGGMAPDASALEGPPLVLALNWLAFCLRRGRVDARQGRMMAFACCRRFQLSRPDQPALLEHFLLEHAVSKTRTLGDTYHEISRAFDADGVAAGALRERRDGEGKSASLNPAGARRR+EQSVNLVP PSGERIQAVYAFLRFVESRLEAARSESESANDA RGALEDARRVLRDALVGMWTG    XXXXXXXXXXXXX RS+S RWLEEEGGESVR+ALEGAKASLFRWADGGSGGCDAPGGNGERQLSTIVFSLWVLGGASAAIGSLDHILSAESFSGVSAERKRLAWLQRLEAA+ILSTQQ++KQQ
Sbjct:   66 MAIGGGMVPGGDDLLTRDAGTIAEYIRLMSFEMLGEESQGRDRPVERWHQVGASIRRRLVPGLSLTEALDKAEATAARPARLPNLLALAAAIRPVDSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEPRAEAPGAKRRRVDANAIMCPFELNGVCNDDDCRYQHLDVYLPP-LNPGTSSAPISASAAANVQPAKSSASGPGSTSPVPGPLAAAA----ARTDERASALGQHRLPAIDFTGAAKRDAVARARENGRRGVVKPSSSRQPTSETGGVTPTAAEGGTADQXXXXXXXXXXXX--GELEEADAVDSGEXXXXXXXXXXXXX-FLALPTERAENNGGDGGEASSGTA------AAPEQASPAALAKAFALAASGALASGGRGNVVRGAGGSGVGREERYYLEGGDGKTQGAASAALPDDQLSALEAKLNEGASCDVEGWLLLAMHQLPRAGGSAKAVLNTIS--DVACGASGPMGSVDQAAVKSALRTFVRPLERADGAQAEVLWLLYLRLFAFLPGKSDDALGMAEYALEKFPTSRRIWRLYHSMLQTSPGWSLPEDVSCYRRQIEALLLLQPRAADMRASPQDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEVKMIVYLVLERCSLLAEAGYKLQAAAEVLDSLGALAEGQPLWGWDARDGQGRRTLLRTFEGGGHEREGEGNGATRXXGGANAGGSTEASDDNGQRLPAGVAAALKHAPRDSRCVLWLTALHLLVMGVFPRHALTLAENDGGGLGGSNDTTAAGGDLAALLLWPTEWLSPKSSAILRLSASPDLQDATLKTFMTALSDVGLLPPPRSQGCWAPAIKDRDALLSSAAEAKAARAGGMAPDASALEGPPLVLALNWLAFCLRRGRVDARQGRMMAFACCRRFQLSRPDQPALLEHFLLEHAVSKTRTLGDTYHEISRAFDADGVAAGALRERRDGEGKSASLNPAGARRRDEQSVNLVPPPSGERIQAVYAFLRFVESRLEAARSESESANDADRGALEDARRVLRDALVGMWTG-VSSXXXXXXXXXXXXXARSESYRWLEEEGGESVRQALEGAKASLFRWADGGSGGCDAPGGNGERQLSTIVFSLWVLGGASAAIGSLDHILSAESFSGVSAERKRLAWLQRLEAAIILSTQQRRKQQ 1241

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig860.20021.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig860.20021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KFG5_9PHAE	0.000e+0	90.53	C3H1-type domain-containing protein n=2 Tax=Ectoca...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1012..1032
IPR019607	Putative zinc-finger domain	PFAM	PF10650	zf-C3H1	coord: 154..173 e-value: 2.0E-9 score: 37.0
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 149..175 score: 8.578

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig860	contig	Ecto-sp13_S_contig860:180..6300 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig860.20021.1	mRNA_Ecto-sp13_S_contig860.20021.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig860 180..6300 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig860.20021.1 ID=prot_Ecto-sp13_S_contig860.20021.1|Name=mRNA_Ecto-sp13_S_contig860.20021.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1181bp
MAIGGGMVPGGDDLLTRDAGTIAEYIRLMSFEVLGEEAQGRDRPVERWHQ
PGLSLTEALDKAEATAARPARLPNLLALAAAIRPVDSSAATATGGGRTSG
AATTAPPSGGTKRKGRDDAVNSPGTAAAAAAAGSDPRAGAPGAKRRRVDA
NAIMCPFELNGVCNDDDCRYQHLDVYLPPSLNPGASPVPNSSSAAANIQP
AKSSASGPGGASPVPGPLASAAAAAAARTDERASALGQHRLPAIDFTGAA
KRDAVARAREDGRRGVVKPSSWRQPSPETGGLTPTAAEGGAADQAGGGGG
GGGGGNVSGELEEADAVDSGEETTSVGGEEEEEEDFLALPTERTENTGGD
SGEASSETASAAAAATAPEQASPAALAKAFALAASGALASDGRSNVVRGA
GGSGVGREERYYLEGGDGKTQGAASAALPDDQLSELEAQLNEGTSCDVEG
WLLLAMHRLPRTGGSAKAVLNTISASDVACGASGPMGSVDQAAIKSALRT
FVRPLERAEGGHAEVLWLLYLRVFDFLPGKSEDALGMAEYALEKFPTSRR
IWRLYHSMLQTSPGWSLSEDVSCYRRQIEALLLLQPRAVDMRASPQDSGS
GGGGGGPGAKATSSGSLGKNKSGNGGTGGTGGGDGGSGAEANVKMILYLV
LERCSLLAEAGYKLQAAAEVLDSLGALAEGQPLWGWDARDGQGRRTLLRT
REGGGHARKGEGKGARREEGGAKAGGSTEAGDDDGQRLPAGVAAALKRAP
RDSRCVLWLTALHLLVMGVFPRHALTLAENDGGGLGGSNDTTAAGGGLAD
LLLWPTEWLSPKSSAILRLSASPDLQDATLKTFMTALSDVGLLPPPRSQG
CWAPAIKDRDALLSSAAEAKAARAGGMAPDASALEGPPLVLALNWLAFCL
RRGRVDARQGRMMAFACCRRFQLSRPDQPALLEHFLLEHAVSKTRTLGDT
YHEISRAFDADGVAAGALRERRDGEGKSASLNPAGARRRNEQSVNLVPQP
SGERIQAVYAFLRFVESRLEAARSESESANDAGRGALEDARRVLRDALVG
MWTGGSSSSSAAASSAAGGGAARSDSDRWLEEEGGESVRRALEGAKASLF
RWADGGSGGCDAPGGNGERQLSTIVFSLWVLGGASAAIGSLDHILSAESF
SGVSAERKRLAWLQRLEAAMILSTQQQQKQQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019607	Putative_zinc-finger_domain
IPR000571	Znf_CCCH