prot_Ecto-sp13_S_contig86.20018.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig86.20018.1
Unique Nameprot_Ecto-sp13_S_contig86.20018.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length312
Homology
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BLAST of mRNA_Ecto-sp13_S_contig86.20018.1 vs. uniprot
Match: A0A6H5JTH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH5_9PHAE)

HSP 1 Score: 598 bits (1543), Expect = 1.060e-214
Identity = 308/311 (99.04%), Postives = 310/311 (99.68%), Query Frame = 0 
Query:    1 MSTAMNTNDGARWAPIPNVPNMKGGTNPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQRAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDSKSSRELVEEEESGTAPPP 311
            MSTAMNTNDGARWAPIPNVPNM+GGTNPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQRAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLA RSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPD+KSSRELVEEEESGTAPPP
Sbjct:   74 MSTAMNTNDGARWAPIPNVPNMEGGTNPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQRAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLATRSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDTKSSRELVEEEESGTAPPP 384
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BLAST of mRNA_Ecto-sp13_S_contig86.20018.1 vs. uniprot
Match: D7FQU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQU3_ECTSI)

HSP 1 Score: 553 bits (1425), Expect = 3.160e-198
Identity = 287/290 (98.97%), Postives = 288/290 (99.31%), Query Frame = 0 
Query:   22 MKGGTNPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQRAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDSKSSRELVEEEESGTAPPP 311
            MKGG +PEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQ AYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDSKSSRELVEEEESGTAPPP
Sbjct:    1 MKGGADPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQMAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDSKSSRELVEEEESGTAPPP 290
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86.20018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTH5_9PHAE1.060e-21499.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQU3_ECTSI3.160e-19898.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 227..284
e-value: 8.8E-10
score: 38.7
NoneNo IPR availablePANTHERPTHR45641:SF3NEPHROCYSTIN-3coord: 40..295
NoneNo IPR availablePANTHERPTHR45641FAMILY NOT NAMEDcoord: 40..295
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 29..164
e-value: 6.0E-12
score: 47.2
coord: 171..299
e-value: 8.5E-26
score: 92.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 178..284
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 52..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig86contigEcto-sp13_S_contig86:22019..25873 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig86.20018.1mRNA_Ecto-sp13_S_contig86.20018.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig86 21591..26047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig86.20018.1 ID=prot_Ecto-sp13_S_contig86.20018.1|Name=mRNA_Ecto-sp13_S_contig86.20018.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp
MSTAMNTNDGARWAPIPNVPNMKGGTNPEEMMRQMSIPDLAQKLDQAEST
FGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQRAYKERPSVE
MAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYAR
CLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVAS
ALDDLASALLFHRDDDYTEMKAVTLLPEAETLAARSLAISRASLGEEHPI
TAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDSKSSRELV
EEEESGTAPPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf