prot_Ecto-sp13_S_contig8598.20012.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8598.20012.1
Unique Nameprot_Ecto-sp13_S_contig8598.20012.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8598.20012.1 vs. uniprot
Match: A0A6H5KQV8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV8_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 2.300e-42
Identity = 85/91 (93.41%), Postives = 87/91 (95.60%), Query Frame = 0 
Query:    1 MPCGGDADEICGGFYAISVYENGADDGEPVEFSCSGDAGVSSGSSCCEADCGXXXXXXXSSRGSGAASCCTSSIQSAGILCSASGAAPCIL 91
            MPCGGDADEICGGFYA+SVYENGADDG P EFSCSGDAGVSSGSSCCEADC XXXXXXXSSRGSGAASCCTS+IQSAGILCS SGAAPCIL
Sbjct:  229 MPCGGDADEICGGFYAMSVYENGADDGVPDEFSCSGDAGVSSGSSCCEADCXXXXXXXXSSRGSGAASCCTSNIQSAGILCSDSGAAPCIL 319
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BLAST of mRNA_Ecto-sp13_S_contig8598.20012.1 vs. uniprot
Match: A0A6H5JU45_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU45_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 4.620e-41
Identity = 78/91 (85.71%), Postives = 78/91 (85.71%), Query Frame = 0 
Query:    1 MPCGGDADEICGGFYAISVYENGADDGEPVEFSCSGDAGVSSGSSCCEADCGXXXXXXXSSRGSGAASCCTSSIQSAGILCSASGAAPCIL 91
            MPCGGDADEICGGFYAISVYEN   DGEPVEFSCSGDAGVSSGSSCCEADC        SSRGSGAASCCTSSIQSAG LCS SGAAPCIL
Sbjct:  172 MPCGGDADEICGGFYAISVYEN---DGEPVEFSCSGDAGVSSGSSCCEADCDTCGGSGCSSRGSGAASCCTSSIQSAGTLCSDSGAAPCIL 259
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BLAST of mRNA_Ecto-sp13_S_contig8598.20012.1 vs. uniprot
Match: A0A6H5K646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K646_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 6.020e-41
Identity = 85/91 (93.41%), Postives = 87/91 (95.60%), Query Frame = 0 
Query:    1 MPCGGDADEICGGFYAISVYENGADDGEPVEFSCSGDAGVSSGSSCCEADCGXXXXXXXSSRGSGAASCCTSSIQSAGILCSASGAAPCIL 91
            MPCGGDADEICGGFYA+SVYENGADDG P EFSCSGDAGVSSGSSCCEADC XXXXXXXSSRGSGAASCCTS+IQSAGILCS SGAAPCIL
Sbjct:  399 MPCGGDADEICGGFYAMSVYENGADDGVPDEFSCSGDAGVSSGSSCCEADCXXXXXXXXSSRGSGAASCCTSNIQSAGILCSDSGAAPCIL 489
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8598.20012.1 vs. uniprot
Match: A0A6H5JW06_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW06_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.210e-30
Identity = 73/91 (80.22%), Postives = 78/91 (85.71%), Query Frame = 0 
Query:    1 MPCGGDADEICGGFYAISVYENGADDGEPVEFSCSGDAGVSSGSSCCEADCGXXXXXXXSSRGSGAASCCTSSIQSAGILCSASGAAPCIL 91
            +PC GD +EICGGFYA+SVYEN ADDG P EFSCSGDAGVS G+SCCE    XXXXXXXS RGSGAASCCTSSIQ+AG LCS SGAAPCIL
Sbjct:  262 IPCSGDVNEICGGFYAMSVYEN-ADDGVPNEFSCSGDAGVSFGTSCCEXXXXXXXXXXXSMRGSGAASCCTSSIQAAGTLCSDSGAAPCIL 351
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8598.20012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KQV8_9PHAE2.300e-4293.41WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JU45_9PHAE4.620e-4185.71WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K646_9PHAE6.020e-4193.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW06_9PHAE1.210e-3080.22WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8598contigEcto-sp13_S_contig8598:5571..5846 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8598.20012.1mRNA_Ecto-sp13_S_contig8598.20012.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8598 4962..6781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8598.20012.1 ID=prot_Ecto-sp13_S_contig8598.20012.1|Name=mRNA_Ecto-sp13_S_contig8598.20012.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
MPCGGDADEICGGFYAISVYENGADDGEPVEFSCSGDAGVSSGSSCCEAD
CGTCGGSGCSSRGSGAASCCTSSIQSAGILCSASGAAPCIL*
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