prot_Ecto-sp13_S_contig8594.20009.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8594.20009.1
Unique Nameprot_Ecto-sp13_S_contig8594.20009.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length186
Homology
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Match: D8LQS3_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQS3_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 3.880e-74
Identity = 120/185 (64.86%), Postives = 139/185 (75.14%), Query Frame = 0
Query:    1 MVDTAVEKFGALHVAFNNAGVFKTATFANMTKDSLDSLLDVNVKSLAWCFKYQIPAMASTAGGKGSIIVNTSGTAIRTSTVPAMXXXXXXXXXXXXXXXXXXXXXXXXXASGVRVNSVLPGHVETPGYGDMPVETLAAITKTDQLIAMPIQPEEIAKVVVFLASGDAAMVNGSSYVMDGGFAITA 185
            MVDTA+EKFG LHVAFNNAGVF+   FA++T+D++D LL++NVKSLAWCFKYQIPAM +TAGGKGSIIVNTS TA+RT+ +P M                         ASGVRVNSV PGHVETP YG+MP ETL A+T T QLIA PI+PEEIA VV+FLAS DAAMV GS+Y MDGG+AI A
Sbjct:   72 MVDTAIEKFGGLHVAFNNAGVFRAVPFADITEDTIDDLLNINVKSLAWCFKYQIPAMKNTAGGKGSIIVNTSSTALRTTALPGMAGGGMYSASKAAAEMLMKYAAIEGAASGVRVNSVSPGHVETPIYGEMPRETLVAVTGTTQLIARPIKPEEIANVVIFLASEDAAMVTGSTYTMDGGWAIKA 256          
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Match: D8LQS1_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS1_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 1.800e-65
Identity = 109/185 (58.92%), Postives = 128/185 (69.19%), Query Frame = 0
Query:    1 MVDTAVEKFGALHVAFNNAGVFKTATFANMTKDSLDSLLDVNVKSLAWCFKYQIPAMASTAGGKGSIIVNTSGTAIRTSTVPAMXXXXXXXXXXXXXXXXXXXXXXXXXASGVRVNSVLPGHVETPGYGDMPVETLAAITKTDQLIAMPIQPEEIAKVVVFLASGDAAMVNGSSYVMDGGFAITA 185
            MVDTA+EKFG LHVAFNNAGVFKT  F ++T+D++D +L+ NVKS+AWC KYQIPAM  TAGGKGSIIVNTS T +R S +P +                         ASGVRVNSV PG VETP +GDMPV+TL A     QL+  P  PEEIAKVV+FLAS DA MV GS+Y MDGG+A+ A
Sbjct:   74 MVDTAIEKFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNTNVKSIAWCLKYQIPAMKDTAGGKGSIIVNTSVTGLRPSALPGLTGAGMYSASKAAAEMLMKYAAIEGAASGVRVNSVAPGLVETPIFGDMPVDTLVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA 258          
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Match: D8LQS5_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS5_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 3.340e-45
Identity = 80/138 (57.97%), Postives = 96/138 (69.57%), Query Frame = 0
Query:    1 MVDTAVEKFGALHVAFNNAGVFKTATFANMTKDSLDSLLDVNVKSLAWCFKYQIPAMASTAGGKGSIIVNTSGTAIRTSTVPAMXXXXXXXXXXXXXXXXXXXXXXXXXASGVRVNSVLPGHVETPGYGDMPVETLAA 138
            MVDTA++KFG LHVAFNNAGV+++A FA++ +D++D LL++NVKSLAWCFKYQIPAM  +AGGKGSIIVNTS TA+R S  P M                         ASGVRVNSV  G V+TP +GDMP ETL A
Sbjct:    1 MVDTAIQKFGGLHVAFNNAGVYRSAPFADIMEDTIDDLLNINVKSLAWCFKYQIPAMKDSAGGKGSIIVNTSSTALRPSASPGMTGSGMYAASKAAAELLMKYAAIEGAASGVRVNSVARGLVKTPIFGDMPDETLVA 138          
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Match: A0A835YRJ1_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ1_9STRA)

HSP 1 Score: 119 bits (298), Expect = 7.610e-30
Identity = 70/183 (38.25%), Postives = 100/183 (54.64%), Query Frame = 0
Query:    1 MVDTAVEKFGALHVAFNNAGVFKTATFANMTKDSLDSLLDVNVKSLAWCFKYQIPAMASTAGGKGSIIVNTSGTAIRTSTVPAMXXXXXXXXXXXXXXXXXXXXXXXXXASGVRVNSVLPGHVETPGYGDMPVETLAAITKTDQLIAMPIQPEEIAKVVVFLASGDAAMVNGSSYVMDGGFAI 183
            +VD A+E +GA++V+F NAG+++TA  A +TK  LD L D NVK +A+  KYQ+ A+   +GGKGS+++N+S      +  P                             G RVNS+ PG V T G GD P +    + KT  L+    +PEEIA+ V FLAS DA+ V G+    DGGF++
Sbjct:   73 LVDKALETYGAVNVSFINAGIYRTAVAAEVTKTILDELYDTNVKGVAYALKYQLAAIEK-SGGKGSVVINSSCAGGNVTAFPVFRSNGPYASTKAAADILMKYAAIEAIDHGTRVNSIAPGVVAT-GLGDFPEDAFDEMGKTVHLMPRAGRPEEIARCVCFLASDDASFVTGTVLYADGGFSL 253          
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Match: A0A835ZCI5_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI5_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.230e-24
Identity = 66/186 (35.48%), Postives = 97/186 (52.15%), Query Frame = 0
Query:    1 MVDTAVEKFGALHVAFNNAGVFKTATFANMTKDSLDSLLDVNVKSLAWCFKYQIPAMASTAGGKGSIIVNTSGTAIRTSTVPAMXXXXXXXXXXXXXXXXXXXXXXXXXASGVRVNSVLPGHVETPGYGD-MPVETLAAITKTDQLIAMPIQPEEIAKVVVFLASGDAAMVNGSSYVMDGGFAITA 185
            +VD A+  +G LH+AF NAG +  A    +T++  D + DVNVKS+A+  K+ +PA+  + GG GS+I+N+SG A+R +  PA                              RVNS+ PG V+T   G+ M  E+  A      L+     PEEIA  V FLAS +A  + GS + +DGG+ + A
Sbjct:   75 IVDAALSAYGKLHIAFLNAGTYGGAPVDQVTEELFDKIFDVNVKSVAFGLKHVLPAIEKSGGG-GSVIINSSGMALRATANPAFAGGGLYSASKAAADMVMKYAAIEASKHKTRVNSIAPGIVQTAIMGEGMTDESYNAFAAPVSLVGRVGTPEEIAPFVCFLASDEATFITGSVHEVDGGWGLKA 259          
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Match: A0A7C4R8I1_9ARCH (SDR family oxidoreductase n=1 Tax=Nitrososphaeria archaeon TaxID=2268198 RepID=A0A7C4R8I1_9ARCH)

HSP 1 Score: 92.4 bits (228), Expect = 1.540e-19
Identity = 59/183 (32.24%), Postives = 88/183 (48.09%), Query Frame = 0
Query:    1 MVDTAVEKFGALHVAFNNAGVFKTATFANMTKDSLDSLLDVNVKSLAWCFKYQIPAMASTAGGKGSIIVNTSGTAIRTSTVPAMXXXXXXXXXXXXXXXXXXXXXXXXXASGVRVNSVLPGHVETPGYGDMPVETLAAITKTDQLIAMPIQPEEIAKVVVFLASGDAAMVNGSSYVMDGGFAI 183
            MV   +EKF  + +  NNAG++    F  MT+   D +++VN+K +  C K  +P M     GK   I+N S  A    +V A                            G+ VN++ PG +ETPG   M  ETL  I +   L  +  +PE++AK+VVFLAS D++ + G   V DGG+ +
Sbjct:   79 MVKATIEKFNRIDILVNNAGIYPFKPFTEMTEQDWDKVMNVNLKGMFNCTKAVVPRMIEQKYGK---IINISSIA---GSVVAFPQLVHYSASKAGIVGFTRSLALELAPYGINVNAIAPGPIETPGTKSMEKETLEQIVRAIPLGRIG-KPEDVAKLVVFLASDDSSFITGQCIVCDGGYTL 254          
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Match: A0A4Q3PYI7_9BURK (SDR family oxidoreductase (Fragment) n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q3PYI7_9BURK)

HSP 1 Score: 90.9 bits (224), Expect = 2.880e-19
Identity = 59/181 (32.60%), Postives = 91/181 (50.28%), Query Frame = 0
Query:    2 VDTAVEKFGALHVAFNNAGVF-KTATFANMTKDSLDSLLDVNVKSLAWCFKYQIPAMASTAGGKGSIIVNTSGTAIRTSTVPAMXXXXXXXXXXXXXXXXXXXXXXXXXASGVRVNSVLPGHVETPGYGDMPVETLAAITKTDQLIAMPIQPEEIAKVVVFLASGDAAMVNGSSYVMDGGF 181
            VD AV +FGALH+AFNNAG+       A++  ++  +L+DVN+ S+ +C  YQIP M    GG    IVN +          A                            G+R+NS+ PG+++TP    +P E   A+     +  +  +P+E+A+VV+FL S  A+ V GS Y++DG +
Sbjct:   43 VDAAVARFGALHLAFNNAGIGGPLGLVADIEIEAYRNLMDVNLHSVFYCMHYQIPVMLKAGGGA---IVNMASVLGLVGDAQAAAYTAAKHGVAGMTKAAALGYAD----KGIRINSIHPGYIDTPLLSSLPKEAYDALVGQHPIGRLG-RPQEVAEVVLFLLSDRASFVTGSQYLVDGAY 215          
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Match: A0A5P9QG72_9MICO (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase n=1 Tax=Luteimicrobium xylanilyticum TaxID=1133546 RepID=A0A5P9QG72_9MICO)

HSP 1 Score: 91.7 bits (226), Expect = 2.960e-19
Identity = 67/185 (36.22%), Postives = 97/185 (52.43%), Query Frame = 0
Query:    2 VDTAVEKFGALHVAFNNAGVF-KTATFANMTK-DSLDSLLDVNVKSLAWCFKYQIPAMASTAGGKGSIIVNTS---GTAIRTSTVPAMXXXXXXXXXXXXXXXXXXXXXXXXXASGVRVNSVLPGHVETPGYGDMPVETLAAITKTDQLIAMPIQPEEIAKVVVFLASGDAAMVNGSSYVMDGGF 181
            VD AV K+GALH+AFNNAG+   T   A++   D+  +L+ VN+ S+ +  KY+IPAM +  GG    IVNTS   G     + VP                           + GVRVNSV PG+++TP    MP E   A+     +  +    +E+A +V+FL S +A+ V GS +V+DGG+
Sbjct:   78 VDGAVTKYGALHLAFNNAGIGGPTGLLADIDDLDAYHALMSVNLDSVFYGMKYEIPAMIAAGGGA---IVNTSSILGLVGEATAVP-------YTAAKHAVAGLTKAAAAGYASQGVRVNSVHPGYIDTPLLQGMPREAYDALVSKHPIGRLG-TADEVANLVLFLLSDEASFVTGSQHVVDGGY 251          
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Match: A0A543E6T6_9GAMM (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=1 Tax=Pseudoxanthomonas sp. 3HH-4 TaxID=1690214 RepID=A0A543E6T6_9GAMM)

HSP 1 Score: 91.3 bits (225), Expect = 4.290e-19
Identity = 67/189 (35.45%), Postives = 94/189 (49.74%), Query Frame = 0
Query:    1 MVDTAVEKFGALHVAFNNAGVF-KTATFANMTKDSLDSLLDVNVKSLAWCFKYQIPAMASTAGGKGSIIVNTSGTAIRTSTVPAMXXXXXXXXXXXXXXXXXXXXXXXXXASGVRVNSVLPGHVETPGY----GDMPVETLAAITKTDQLIAMPIQPEEIAKVVVFLASGDAAMVNGSSYVMDGGFAIT 184
            +VDTA+++FG L VAFNNAGV  +T     M+ D     LD N+ S     KYQ+PAM +  GG    ++ TS     T+  P M                         ASG+RVN+VLPG  +TP       D   E  A + +   L  M   PEEIA+ V+ LAS  ++ + G+++ +DGG +IT
Sbjct:   73 LVDTAIDQFGGLDVAFNNAGVLGETKPITEMSLDEWHETLDTNLASAFLGAKYQVPAMLARGGGS---LIFTSSFVGYTAGFPGMAAYAASKAGQIGLVKALAAEYG---ASGIRVNAVLPGGTDTPASITNAPDATPEVQAFVERIHALKRMA-SPEEIARSVLHLASDASSFITGTAFFVDGGVSIT 254          
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Match: A0A6D1IGR0_9MICO (SDR family oxidoreductase n=6 Tax=Microbacteriaceae TaxID=85023 RepID=A0A6D1IGR0_9MICO)

HSP 1 Score: 90.5 bits (223), Expect = 8.100e-19
Identity = 65/188 (34.57%), Postives = 93/188 (49.47%), Query Frame = 0
Query:    2 VDTAVEKFGALHVAFNNAGVFKTATFANMTKDSLD-----SLLDVNVKSLAWCFKYQIPAMASTAGGKGSIIVNTS---GTAIRTSTVPAMXXXXXXXXXXXXXXXXXXXXXXXXXASGVRVNSVLPGHVETPGYGDMPVETLAAITKTDQLIAMPIQPEEIAKVVVFLASGDAAMVNGSSYVMDGGF 181
            VD AVE FG LH+AFNNAG+           DS D      L+D+N+ S+ +  +Y+IPA+ +  GG    IVNTS   G     +  P                           A GVR+NSV PG+++TP    +P E   A+ +   +  +    EE+A +VVFL S  A+ +NGS Y++DGG+
Sbjct:   75 VDAAVEAFGGLHLAFNNAGIGGPQGLLGDYDDSDDFAAYQRLIDINLNSVYYGMRYEIPAIIAAGGGA---IVNTSSILGIVGEPTAAP-------YSAAKHGVAGMTKSAGAAYAAQGVRINSVHPGYIDTPLLEALPKEAYEALVQKHPIGRLG-TAEEVAHLVVFLLSDRASFINGSQYLIDGGY 251          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8594.20009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQS3_ECTSI3.880e-7464.86Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
D8LQS1_ECTSI1.800e-6558.92Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]
D8LQS5_ECTSI3.340e-4557.97Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]
A0A835YRJ1_9STRA7.610e-3038.25Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835ZCI5_9STRA1.230e-2435.48Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A7C4R8I1_9ARCH1.540e-1932.24SDR family oxidoreductase n=1 Tax=Nitrososphaeria ... [more]
A0A4Q3PYI7_9BURK2.880e-1932.60SDR family oxidoreductase (Fragment) n=1 Tax=Comam... [more]
A0A5P9QG72_9MICO2.960e-1936.222,3-dihydro-2,3-dihydroxybenzoate dehydrogenase n=... [more]
A0A543E6T6_9GAMM4.290e-1935.45NAD(P)-dependent dehydrogenase (Short-subunit alco... [more]
A0A6D1IGR0_9MICO8.100e-1934.57SDR family oxidoreductase n=6 Tax=Microbacteriacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 145..165
score: 33.33
coord: 10..21
score: 45.35
coord: 67..83
score: 19.29
coord: 111..128
score: 41.68
coord: 90..109
score: 37.18
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 1..181
e-value: 6.1E-37
score: 127.4
NoneNo IPR availableGENE3D3.40.50.720coord: 1..185
e-value: 2.8E-43
score: 150.2
NoneNo IPR availablePANTHERPTHR24321FAMILY NOT NAMEDcoord: 1..183
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8594contigEcto-sp13_S_contig8594:3163..5590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8594.20009.1mRNA_Ecto-sp13_S_contig8594.20009.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8594 1956..6363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8594.20009.1 ID=prot_Ecto-sp13_S_contig8594.20009.1|Name=mRNA_Ecto-sp13_S_contig8594.20009.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp
MVDTAVEKFGALHVAFNNAGVFKTATFANMTKDSLDSLLDVNVKSLAWCF
KYQIPAMASTAGGKGSIIVNTSGTAIRTSTVPAMSGVAMYAATKAAAEML
MKYAAIEGAASGVRVNSVLPGHVETPGYGDMPVETLAAITKTDQLIAMPI
QPEEIAKVVVFLASGDAAMVNGSSYVMDGGFAITA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf