prot_Ecto-sp13_S_contig8593.20008.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8593.20008.1
Unique Nameprot_Ecto-sp13_S_contig8593.20008.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length356
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8593.20008.1 vs. uniprot
Match: D7FQH7_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQH7_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 4.820e-162
Identity = 327/369 (88.62%), Postives = 333/369 (90.24%), Query Frame = 0 
Query:    1 MLSSLPAETAFPQHKRRSSKGMKVLGTPNREPPSSCLSSLTSNPSAFFGPAWSPSSSPASTVRSPLPLDADQPGSPDSSRVESVRKGEAFSSATGKATRSYVHEEEGRATTPQKHRTHGGAVHDR-------------RKLSFGGLSRGLLRLLGQRTLSDDSSKIGPKTGKQDKPKANVVFLGDRSEEDRESDEAPSTDSVTDERRQPPFGGGDEAEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAPPXXXXXXXXXXXXXXXXXXXTGDERFQLPSRGGDEGPHQVRSPLVVGPSKRVAAEEADVENCRSATIDPRAVEIAASSTAEQAKVAVMPDTLAREAAEQGLVLPCGPSDEEKV 356
            MLSSLPAETAFPQHKRRS KGMKVLGTPN EPPSSCLSSLTSNPSAFFGPAWSPSSSPASTVRSPLPLDADQPGSP SSR ES+RK +AFSSATGKATRSYVHEEEGRATTPQKHRTHGGAV+D              RKLSFGGLS+GLLRLLGQRTLSDDSSK GPKTGKQD PKA VVF GDRSEEDRESDEAPSTDSVTDERRQPPFGGGDEA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+A  XXXXXXXXXXXXXXXXXXX  DERFQLPSRGGDE PHQVRSPLVVGPSKRVAAEEADVENCR ATIDPRAVEIAA STAE AK AVMPDTL R+AAEQGLVLPCGPSDEEKV
Sbjct:    1 MLSSLPAETAFPQHKRRSIKGMKVLGTPNLEPPSSCLSSLTSNPSAFFGPAWSPSSSPASTVRSPLPLDADQPGSPGSSRAESLRKEKAFSSATGKATRSYVHEEEGRATTPQKHRTHGGAVNDTXXXXXXXXXXXXXRKLSFGGLSKGLLRLLGQRTLSDDSSKTGPKTGKQDAPKAKVVFPGDRSEEDRESDEAPSTDSVTDERRQPPFGGGDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALXXXXXXXXXXXXXXXXXXXXXXDERFQLPSRGGDEVPHQVRSPLVVGPSKRVAAEEADVENCRPATIDPRAVEIAAPSTAELAKAAVMPDTLVRQAAEQGLVLPCGPSDEEKV 369
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8593.20008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQH7_ECTSI4.820e-16288.62Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8593contigEcto-sp13_S_contig8593:206..1273 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8593.20008.1mRNA_Ecto-sp13_S_contig8593.20008.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8593 206..1273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8593.20008.1 ID=prot_Ecto-sp13_S_contig8593.20008.1|Name=mRNA_Ecto-sp13_S_contig8593.20008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=356bp
MLSSLPAETAFPQHKRRSSKGMKVLGTPNREPPSSCLSSLTSNPSAFFGP
AWSPSSSPASTVRSPLPLDADQPGSPDSSRVESVRKGEAFSSATGKATRS
YVHEEEGRATTPQKHRTHGGAVHDRRKLSFGGLSRGLLRLLGQRTLSDDS
SKIGPKTGKQDKPKANVVFLGDRSEEDRESDEAPSTDSVTDERRQPPFGG
GDEAEVALPGDRSEECKESREAPSTDSISDEECKLPSGGGNAPPGGWSEE
DEEFSEAPSTDSVTGDERFQLPSRGGDEGPHQVRSPLVVGPSKRVAAEEA
DVENCRSATIDPRAVEIAASSTAEQAKVAVMPDTLAREAAEQGLVLPCGP
SDEEKV
back to top