prot_Ecto-sp13_S_contig859.20004.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig859.20004.1
Unique Nameprot_Ecto-sp13_S_contig859.20004.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length645
Homology
BLAST of mRNA_Ecto-sp13_S_contig859.20004.1 vs. uniprot
Match: D7G5B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B7_ECTSI)

HSP 1 Score: 934 bits (2415), Expect = 0.000e+0
Identity = 532/618 (86.08%), Postives = 549/618 (88.83%), Query Frame = 0
Query:   33 KRKPAGAAXXXXXXXXXXXXXXXXXXXXTKAEVRKSGRKNAAEWAEVRLNKKRTSGEGTSSEDEDDNGSDAMETSDLNDDT---SVRNPPAKRPAPSRNGRTPKPSLPPPMSETISETKAPPSTSWPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXK----RATDRRLEGKTHTPSRKNSFLRHANGTEGTDSSTAASASNGPSLNSENLGGLNARSQARRGPSFLDRERAGRDTVGTAGAEGRTPDMNGTRGQKDKSKSKVDFVPXXXXXXXXXXXXXXXDARPRRGKSLEWAFKCAVMMVLAPVMVLLLVSGLLVAWPHVQVAAGGAWGAFRGLTAKTPPVEKCFLQPGEQEVVVCKSGTEATDCPDHATCGAGRILHCNLPYTLRKDRAACVLVAEAEEEAKAVVEALRTLTAEELCKGKGLIMPRASSRGSFITLTDAATAQNRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDGDEDCAGSGMERVARLSESAHDAVMGTLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRHAQVCTIRDVCYQTLLDHVSKDSSAMQVSHIQSSVTDWTRQRVAQNRATIQRHVADLWPLVRAE 643
            KRKPAGAA             XXXXX   KAE RKSGRKNAA+WAEV L KKRTSGEGTSSEDEDDN SDAMETSDLNDDT   SVR PPAKRPAPSRNGRT KPSLPPPMSETISET+APPSTSWP SG  XXXXXXXXXXXXXXXXXXXXXXXXX     RAT RRLEGKT+TPSRK+SFLRHANGTEGTDS+TAASAS+GPSLNS+NLGG   R QARRGPSFLDRERAGRDTV TAGAEGRTPDM GTRGQKDKSKSKVD VP               DARPRRGKSLEW FKCAV++VLAPV+VLLLVSGLLVAWPHVQVAAGGAWGAFRGLTAKTP VEKCFLQPGEQE +VCKSGTEA DCPDHATCGAGRILHCNLPYTLRKDRAACVLVAEAE+EAKAVVEALRTLTAEELCKGKGLIMPRAS+RGSFITLTDAATAQ+RGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDG E CAGSGMERVARLSESAHDAVM TLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRH QVCTIRD+CYQTLLDH SKDSS MQVSHIQSSVTDWTRQRVA+NRATIQRH+A LWPLV  E
Sbjct:    6 KRKPAGAAGSTSPPSSKKPRTXXXXXKTNKAEDRKSGRKNAAKWAEVTLKKKRTSGEGTSSEDEDDNVSDAMETSDLNDDTPGPSVRKPPAKRPAPSRNGRTRKPSLPPPMSETISETRAPPSTSWPESGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATGRRLEGKTYTPSRKSSFLRHANGTEGTDSATAASASDGPSLNSDNLGGPKTRGQARRGPSFLDRERAGRDTVATAGAEGRTPDMKGTRGQKDKSKSKVDSVPQPAQATDAGADADGDDARPRRGKSLEWTFKCAVVVVLAPVVVLLLVSGLLVAWPHVQVAAGGAWGAFRGLTAKTPSVEKCFLQPGEQEDIVCKSGTEAMDCPDHATCGAGRILHCNLPYTLRKDRAACVLVAEAEKEAKAVVEALRTLTAEELCKGKGLIMPRASARGSFITLTDAATAQSRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDGAEGCAGSGMERVARLSESAHDAVMRTLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRHVQVCTIRDLCYQTLLDHASKDSSPMQVSHIQSSVTDWTRQRVAKNRATIQRHIAGLWPLVERE 623          
BLAST of mRNA_Ecto-sp13_S_contig859.20004.1 vs. uniprot
Match: A0A6H5L750_9PHAE (MSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L750_9PHAE)

HSP 1 Score: 869 bits (2245), Expect = 1.590e-310
Identity = 517/662 (78.10%), Postives = 533/662 (80.51%), Query Frame = 0
Query:    1 PPNSTKSALADKKTKPSLAERRANALEYKKSLKRKPAGAAXXXXXXXXXXXXXXXXXXXXTKAEVRKSGRKNAAEWAEVRLNKKRTSGE------GTSSEDEDDNGSDAMETSDLNDDT---SVRNPPAKRPAPSRNGRTPKPSLPPPMSETISETKAPPSTSWPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXKRATDRRLEGKTHTPSRKNSFLRHANGTEGT--DSSTAASASNGPSLNSENLGGLNARSQARRGPSFLDRERAGRDTVGTAGAEGRTPDMNGTR------GQKDKSKSKVDFVPXXXXXXXXXXXXXXXDARPRRGKSL--EWAFKCAVMMVLAPVMVLLLVSGLLVAWPHVQVAAGGAWGAFRGLTAKTPPVEKCFLQPGEQEVVVCKSGTEATDCPDHATCGAGRILHCNLPYTLRKDRAACVLVAEAEEEAKAVVEALRTLTAEELCKGKGLIMPRASSRGSFITLTDAATAQNRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDGDEDCAGSGMERVARLSESAHDAVMGTLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRHAQVCTIRDVCYQTLLDHVSKDSSAMQVSHIQSSVTDWTRQRVAQNRATIQRHVADLWPLVRAE 643
            P  ST SALADKK K S+AE +A+ALEYKKSLKRKPAG A                     KAEVRKS RK AA+WAEVR +KK    +           DEDDNGSDAMETSDL DDT   SVR PPAKRP PSRNG T KPSLPPPMSETISETKAPPSTSWPGSG                 XXXXXXXXXX  AT RRLEGKTHTPSRK SFLRHA+GTEGT  DS+ AA ASNGPSLNS+NLG   AR QARRGPSFL+RERAG D VGTAGAEG+ PD  GTR      G  DKSK  VD VP  XXXXXXXXXXXXX            EWAFKCAV+MV    MVLLLVSGLLVAWP VQVAAGGAWGAFRGLTAKTPPVEKCFLQ GEQ  VVCKSGTEATDCP HATCGAGRILHCNLPYTL+KDRAACVLVAEAEEEAKAVVEALRTLTAEELCKGKGLIMPRASSRGSFITLTDAATAQNRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDG EDCAGSGMERVARLSESAHDAVM TLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRH QVCTIRDVCYQTLLD+ SKDSSAMQVSHIQSSVTDWTRQRVA+NRATI RH+ADLWPLV  E
Sbjct:    4 PSKSTNSALADKKKKSSVAESKASALEYKKSLKRKPAGGAGSTSPPSSKKPRTPATPAKTNKAEVRKSSRKMAAKWAEVRQSKKLRQSKKXXXXXXXXXXDEDDNGSDAMETSDLGDDTPSPSVRKPPAKRPPPSRNGGTLKPSLPPPMSETISETKAPPSTSWPGSGSGTRPAQPMSNGSPPAPXXXXXXXXXXXXATGRRLEGKTHTPSRKFSFLRHAHGTEGTLTDSAAAAPASNGPSLNSDNLGXXXARGQARRGPSFLNRERAGWDKVGTAGAEGKAPDRKGTRSLVGLVGPNDKSK--VDSVPQPXXXXXXXXXXXXXXXXXXXXXXXXPEWAFKCAVVMV----MVLLLVSGLLVAWPQVQVAAGGAWGAFRGLTAKTPPVEKCFLQLGEQGDVVCKSGTEATDCPAHATCGAGRILHCNLPYTLKKDRAACVLVAEAEEEAKAVVEALRTLTAEELCKGKGLIMPRASSRGSFITLTDAATAQNRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDGAEDCAGSGMERVARLSESAHDAVMDTLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRHVQVCTIRDVCYQTLLDNASKDSSAMQVSHIQSSVTDWTRQRVAKNRATIHRHIADLWPLVERE 659          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig859.20004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5B7_ECTSI0.000e+086.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L750_9PHAE1.590e-31078.10MSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 423..443
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 319..345
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 552..571
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..318
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 572..644
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 346..551
NoneNo IPR availableTMHMMTMhelixcoord: 547..569

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig859contigEcto-sp13_S_contig859:13905..20696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig859.20004.1mRNA_Ecto-sp13_S_contig859.20004.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig859 13905..20696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig859.20004.1 ID=prot_Ecto-sp13_S_contig859.20004.1|Name=mRNA_Ecto-sp13_S_contig859.20004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=645bp
PPNSTKSALADKKTKPSLAERRANALEYKKSLKRKPAGAAGSTSPTSSKK
PRTPAKPAKTTKAEVRKSGRKNAAEWAEVRLNKKRTSGEGTSSEDEDDNG
SDAMETSDLNDDTSVRNPPAKRPAPSRNGRTPKPSLPPPMSETISETKAP
PSTSWPGSGSGSGRRSAQPMSNGSPPAPPPGTPTPTKRATDRRLEGKTHT
PSRKNSFLRHANGTEGTDSSTAASASNGPSLNSENLGGLNARSQARRGPS
FLDRERAGRDTVGTAGAEGRTPDMNGTRGQKDKSKSKVDFVPQPASAAAA
AGDGDGDDARPRRGKSLEWAFKCAVMMVLAPVMVLLLVSGLLVAWPHVQV
AAGGAWGAFRGLTAKTPPVEKCFLQPGEQEVVVCKSGTEATDCPDHATCG
AGRILHCNLPYTLRKDRAACVLVAEAEEEAKAVVEALRTLTAEELCKGKG
LIMPRASSRGSFITLTDAATAQNRGPLSLLAGMPPGNVVGLIELEGEPAQ
VFGGGQDGDEDCAGSGMERVARLSESAHDAVMGTLGWRCKARLAAGSWFM
TYWQYCLAMYCLVVGAVCLDLRRRNSYYRHAQVCTIRDVCYQTLLDHVSK
DSSAMQVSHIQSSVTDWTRQRVAQNRATIQRHVADLWPLVRAES*
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