prot_Ecto-sp13_S_contig85877.19997.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig85877.19997.1
Unique Nameprot_Ecto-sp13_S_contig85877.19997.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 4.340e-24
Identity = 49/83 (59.04%), Postives = 67/83 (80.72%), Query Frame = 0
Query:    2 LKAVIWSTAEQRVAARQFGHVAIQDNTCLTNRYDMKLMLFIGVDSENKTIVFAPGFFSDEQTASFLWALEHYVEICGGRHPEV 84
            L++++W++ EQ + AR +G V IQDNTCLTNRY+ KL LF+GVDSENKT VFA GFFS+E T +F +A + +++ICGG HP+V
Sbjct:   64 LRSIMWASPEQILLARTYGGVVIQDNTCLTNRYNNKLCLFVGVDSENKTQVFAQGFFSNESTEAFDFANKFFLDICGG-HPKV 145          
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 9.850e-20
Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    2 LKAVIWSTAEQRVAARQFGHVAIQDNTCLTNRYDMKLMLFIGVDSENKTIVFAPGFFSDEQTASFLWALEHYVEICGG 79
            L++++W++ EQ + AR +G + IQDNTCL NRYD KL LF+GVDSENKT +FA G  S+EQ +SF +A    +EI GG
Sbjct:  837 LRSIMWASPEQIMLARTYGGIVIQDNTCLINRYDFKLCLFVGVDSENKTGIFAQGLLSNEQISSFDFANRFLLEIRGG 914          
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 3.400e-14
Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 0
Query:   33 RYDMKLMLFIGVDSENKTIVFAPGFFSDEQTASFLWALEHYVEICGGRHPEV 84
            RY M  MLFIGVDSENKT+VFA GFFSD+ + ++ WAL+HY  ICGG+ PEV
Sbjct:  152 RYGMHFMLFIGVDSENKTVVFAQGFFSDQSSDTYQWALKHYCTICGGQ-PEV 202          
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Match: UPI001C718759 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C718759)

HSP 1 Score: 69.7 bits (169), Expect = 4.070e-12
Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 0
Query:    1 RLKAVIWSTAEQRVAARQFGHVAIQDNTCLTNRYDMKLMLFIGVDSENKTIVFAPGFFSDEQTASFLWALEHYVEICGGRHPE 83
            RL+ V W+ A  R A   FG V  +D T LTNRY M    F+GV+   ++I+F  G  S E T SF+W  + +++   GR P+
Sbjct:  268 RLRNVFWADARSRAAYEYFGDVVSKDTTYLTNRYGMPFAPFVGVNHHGQSILFRAGLLSSEDTHSFVWLFQMWLDCMKGRAPK 350          
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Match: UPI001BF23DE4 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF23DE4)

HSP 1 Score: 69.3 bits (168), Expect = 6.730e-12
Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 0
Query:    1 RLKAVIWSTAEQRVAARQFGHVAIQDNTCLTNRYDMKLMLFIGVDSENKTIVFAPGFFSDEQTASFLWALEHYVEICGGRHPE 83
            RL+ V W+ A  R A   FG V   D T LTNRY M    F+GV+   ++I+   G  S E T++F+W  E ++E   GR P+
Sbjct:  237 RLRNVFWADARSRAAYEYFGDVITFDTTYLTNRYGMPFAPFVGVNHHGQSILLGAGLLSSEDTSTFVWLFEAWLECMNGRAPK 319          
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Match: A0A835DCY8_9MAGN (Protein FAR1-RELATED SEQUENCE n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DCY8_9MAGN)

HSP 1 Score: 69.3 bits (168), Expect = 6.860e-12
Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 0
Query:    2 LKAVIWSTAEQRVAARQFGHVAIQDNTCLTNRYDMKLMLFIGVDSENKTIVFAPGFFSDEQTASFLWALEHYVEICGGRHP 82
            L+ V W+ A  R A   FG + + D TCLTN+YDM L+ F+GV+   ++++   G  +DE   SF+W  + +++   G  P
Sbjct:  250 LRNVFWADARSRAACAYFGDIIMLDTTCLTNKYDMPLVYFLGVNHHGQSVLLGCGLLADETRESFIWLFKAWLKSVSGHLP 330          
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Match: UPI001C7282C0 (protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C7282C0)

HSP 1 Score: 68.6 bits (166), Expect = 1.190e-11
Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 0
Query:    1 RLKAVIWSTAEQRVAARQFGHVAIQDNTCLTNRYDMKLMLFIGVDSENKTIVFAPGFFSDEQTASFLWALEHYVEICGGRHPE 83
            RL+ V W+ A  R A   FG V   D T LTNRY M    F+GV+   ++I+F  G  S E T SF+W  + +++   GR P+
Sbjct:  198 RLRNVFWADARSRAAYEYFGDVVSFDTTYLTNRYGMPFAPFVGVNHHGQSILFGAGLLSSEDTHSFVWLFQMWLDCMKGRAPK 280          
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Match: A0A2I4FLL1_JUGRE (Protein FAR1-RELATED SEQUENCE n=3 Tax=Juglans regia TaxID=51240 RepID=A0A2I4FLL1_JUGRE)

HSP 1 Score: 68.6 bits (166), Expect = 1.260e-11
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0
Query:    1 RLKAVIWSTAEQRVAARQFGHVAIQDNTCLTNRYDMKLMLFIGVDSENKTIVFAPGFFSDEQTASFLWALEHYVEICGGRHP 82
            R++ V W+ A  R A   FG V   D T LTNRY M   LF+GV+   ++I+      S E T++F+W  E ++E   GR P
Sbjct:  411 RVRNVFWADARSRAAYEYFGDVITFDTTYLTNRYGMPFALFVGVNHHGQSILLGADLISSEDTSTFVWLFEAWLECMNGREP 492          
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Match: UPI001BF5887B (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF5887B)

HSP 1 Score: 68.6 bits (166), Expect = 1.260e-11
Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 0
Query:    1 RLKAVIWSTAEQRVAARQFGHVAIQDNTCLTNRYDMKLMLFIGVDSENKTIVFAPGFFSDEQTASFLWALEHYVEICGGRHPE 83
            RL+ V W+ A  R A   FG V   D T LTNRY M    F+GV+   ++I+F  G  S E T SF+W  + +++   GR P+
Sbjct:  174 RLRNVFWADARSRAAYEYFGDVVSFDTTYLTNRYGMPFAPFVGVNHHGQSILFGAGLLSSEDTHSFVWLFQMWLDCMKGRAPK 256          
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Match: A0A6P9EMG0_JUGRE (Protein FAR1-RELATED SEQUENCE n=1 Tax=Juglans regia TaxID=51240 RepID=A0A6P9EMG0_JUGRE)

HSP 1 Score: 68.6 bits (166), Expect = 1.290e-11
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0
Query:    1 RLKAVIWSTAEQRVAARQFGHVAIQDNTCLTNRYDMKLMLFIGVDSENKTIVFAPGFFSDEQTASFLWALEHYVEICGGRHP 82
            R++ V W+ A  R A   FG V   D T LTNRY M   LF+GV+   ++I+      S E T++F+W  E ++E   GR P
Sbjct:  408 RVRNVFWADARSRAAYEYFGDVITFDTTYLTNRYGMPFALFVGVNHHGQSILLGADLISSEDTSTFVWLFEAWLECMNGREP 489          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig85877.19997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF6_ECTSI4.340e-2459.04Putative far-red impaired response protein n=1 Tax... [more]
A0A6H5K454_9PHAE9.850e-2055.13SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEJ0_9PHAE3.400e-1467.31SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI001C7187594.070e-1239.76protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Carya... [more]
UPI001BF23DE46.730e-1239.76Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A835DCY8_9MAGN6.860e-1235.80Protein FAR1-RELATED SEQUENCE n=1 Tax=Tetracentron... [more]
UPI001C7282C01.190e-1139.76protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Carya... [more]
A0A2I4FLL1_JUGRE1.260e-1139.02Protein FAR1-RELATED SEQUENCE n=3 Tax=Juglans regi... [more]
UPI001BF5887B1.260e-1139.76Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A6P9EMG0_JUGRE1.290e-1139.02Protein FAR1-RELATED SEQUENCE n=1 Tax=Juglans regi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 25..83
e-value: 6.2E-11
score: 42.6
IPR031052FHY3/FAR1 familyPANTHERPTHR31669FAMILY NOT NAMEDcoord: 1..83
NoneNo IPR availablePANTHERPTHR31669:SF196coord: 1..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig85877contigEcto-sp13_S_contig85877:5..424 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig85877.19997.1mRNA_Ecto-sp13_S_contig85877.19997.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig85877 5..424 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig85877.19997.1 ID=prot_Ecto-sp13_S_contig85877.19997.1|Name=mRNA_Ecto-sp13_S_contig85877.19997.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
RLKAVIWSTAEQRVAARQFGHVAIQDNTCLTNRYDMKLMLFIGVDSENKT
IVFAPGFFSDEQTASFLWALEHYVEICGGRHPEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom
IPR031052FHY3/FAR1