prot_Ecto-sp13_S_contig85837.19995.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig85837.19995.1
Unique Nameprot_Ecto-sp13_S_contig85837.19995.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig85837.19995.1 vs. uniprot
Match: A0A6H5JKZ2_9PHAE (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ2_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.260e-33
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0 
Query:    1 MEEELSRRGARLEVVRYGGGAMHAFTRPEKTSQVDREAGLSYCKYAEEDSWRRVVELLREEFA 63
            MEEELSRRGARLEVVRYGG AMHAFTRPEKTSQVDR+AGLSYCKYAEEDSWRRVVELLREEFA
Sbjct:  306 MEEELSRRGARLEVVRYGGSAMHAFTRPEKTSQVDRDAGLSYCKYAEEDSWRRVVELLREEFA 368
[Close]
BLAST of mRNA_Ecto-sp13_S_contig85837.19995.1 vs. uniprot
Match: A0A0G4EJ35_VITBC (DLH domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJ35_VITBC)

HSP 1 Score: 53.5 bits (127), Expect = 1.010e-6
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0 
Query:    2 EEELSRRGARLEVVRYGGGAMHAFTRPEKTSQVDREAGLSYCKYAEEDSWRRVVELLREEF 62
            ++ELS +    ++  YGG A H+FTRPEK +Q DR+AGL YC  +E  S+R     L++ F
Sbjct:  230 QQELSDQRTDWQIHIYGG-AKHSFTRPEKVTQADRDAGLQYCPKSERRSYRTTKAFLQDIF 289
[Close]
BLAST of mRNA_Ecto-sp13_S_contig85837.19995.1 vs. uniprot
Match: A0A5B8MBQ6_9CHLO (Dienelactone hydrolase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MBQ6_9CHLO)

HSP 1 Score: 53.1 bits (126), Expect = 1.240e-6
Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 0 
Query:    3 EELSRRGARLEVVRYGGGAMHAFTRPEKTSQVDREAGLSYCKYAEEDSWRRVVELLREEFA 63
            EE+  +GAR ++  +GG  +HAFTRP+KT+Q  +E G  Y KYA + SW       +  F+
Sbjct:  201 EEMESKGARWQLHEFGG-CVHAFTRPDKTTQEHKEKGFFYDKYAADSSWAMTRAFFKSVFS 260
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig85837.19995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JKZ2_9PHAE2.260e-3396.83DLH domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A0G4EJ35_VITBC1.010e-644.26DLH domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A5B8MBQ6_9CHLO1.240e-640.98Dienelactone hydrolase n=3 Tax=Chloropicon primus ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 1..63
e-value: 3.2E-7
score: 31.9
IPR002925Dienelactone hydrolasePFAMPF01738DLHcoord: 1..60
e-value: 1.3E-7
score: 31.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig85837contigEcto-sp13_S_contig85837:357..548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig85837.19995.1mRNA_Ecto-sp13_S_contig85837.19995.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig85837 336..548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig85837.19995.1 ID=prot_Ecto-sp13_S_contig85837.19995.1|Name=mRNA_Ecto-sp13_S_contig85837.19995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
MEEELSRRGARLEVVRYGGGAMHAFTRPEKTSQVDREAGLSYCKYAEEDS
WRRVVELLREEFA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR002925Dienelactn_hydro