prot_Ecto-sp13_S_contig8581.19991.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8581.19991.1
Unique Nameprot_Ecto-sp13_S_contig8581.19991.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
BLAST of mRNA_Ecto-sp13_S_contig8581.19991.1 vs. uniprot
Match: A0A6H5JWC3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWC3_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.750e-15
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    1 MTTAAAGVTPRHCRYSYIWPPAYETMSVLIPNLFNVPLCDFGVGPIGGDLRSLAAYAVSSSIQCA 65
            + T   GVTPR  +Y  +WPP +ET +V++PNLF++P CDFGVG +  DLRS+ AY  S +  CA
Sbjct:   60 LVTTLLGVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCA 124          
BLAST of mRNA_Ecto-sp13_S_contig8581.19991.1 vs. uniprot
Match: D7FMN7_ECTSI (Probable fusion protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN7_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.280e-7
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0
Query:   26 MSVLIPNLFNVPLCDFGVGPIGGDLRSLAAYAVSSSIQC 64
            MSVL+PNL+N+P CDFG+G I G LR L AY +S    C
Sbjct:    1 MSVLVPNLWNIPFCDFGIGTIDGGLRGLVAYVISREYGC 39          
BLAST of mRNA_Ecto-sp13_S_contig8581.19991.1 vs. uniprot
Match: A0A7W0QFS0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0QFS0_9ACTN)

HSP 1 Score: 51.6 bits (122), Expect = 8.810e-7
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 0
Query:    7 GVTPRHCRYSYIWPPAYETMSVLIPNLFNVPLCDFGVGPIGGDLRSLAAYAVS 59
            GV P    Y  IWPPA+ T ++++PN  N+P+  FG+G    D+  LA Y  S
Sbjct:    2 GVVPNCDPYLEIWPPAFRTYNIMVPNFLNLPVPVFGLGGPPADVVGLAMYVAS 54          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8581.19991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JWC3_9PHAE1.750e-1550.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FMN7_ECTSI1.280e-758.97Probable fusion protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7W0QFS0_9ACTN8.810e-741.51Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8581contigEcto-sp13_S_contig8581:2648..3334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8581.19991.1mRNA_Ecto-sp13_S_contig8581.19991.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8581 2648..3334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8581.19991.1 ID=prot_Ecto-sp13_S_contig8581.19991.1|Name=mRNA_Ecto-sp13_S_contig8581.19991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
MTTAAAGVTPRHCRYSYIWPPAYETMSVLIPNLFNVPLCDFGVGPIGGDL
RSLAAYAVSSSIQCACRCLPFTERGNTSTTW
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